RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 RABGEF1Q9UJ41 708 aa8.6□□□□□ -1.03
NUP98-218ENST00000530516 CADPS2Q86UW7 1296 aa8.59□□□□□ -1.03
NUP98-218ENST00000530516 WNT2BQ93097 391 aa8.59□□□□□ -1.03
NUP98-218ENST00000530516 LAPTM4BQ86VI4 370 aa8.58□□□□□ -1.04
NUP98-218ENST00000530516 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.58□□□□□ -1.04
NUP98-218ENST00000530516 RGS20O76081 388 aa8.57□□□□□ -1.04
NUP98-218ENST00000530516 PTPN5P54829 565 aa8.57□□□□□ -1.04
NUP98-218ENST00000530516 SPRYD3Q8NCJ5 442 aa8.55□□□□□ -1.04
NUP98-218ENST00000530516 ANKK1Q8NFD2 765 aa8.55□□□□□ -1.04
NUP98-218ENST00000530516 NYAP1Q6ZVC0 841 aa8.54□□□□□ -1.04
NUP98-218ENST00000530516 SPDYE16A6NNV3 312 aaPredicted RBP8.53□□□□□ -1.04
NUP98-218ENST00000530516 DPYSL4O14531 572 aa8.53□□□□□ -1.04
NUP98-218ENST00000530516 C6orf132Q5T0Z8 1188 aa8.52□□□□□ -1.05
NUP98-218ENST00000530516 COL9A1P20849 921 aa8.5□□□□□ -1.05
NUP98-218ENST00000530516 PDIA6Q15084 440 aa8.5□□□□□ -1.05
NUP98-218ENST00000530516 PROX2Q3B8N5 592 aa8.49□□□□□ -1.05
NUP98-218ENST00000530516 SOWAHBA6NEL2 793 aa8.48□□□□□ -1.05
NUP98-218ENST00000530516 TRIM6-TRIM34B2RNG4 842 aa8.48□□□□□ -1.05
NUP98-218ENST00000530516 KIAA1468Q9P260 1216 aa8.48□□□□□ -1.05
NUP98-218ENST00000530516 ARIH1Q9Y4X5 557 aaPredicted RBP8.48□□□□□ -1.05
NUP98-218ENST00000530516 A0A0G2JS52 829 aa8.46□□□□□ -1.06
NUP98-218ENST00000530516 EN1Q05925 392 aaPredicted RBP8.46□□□□□ -1.06
NUP98-218ENST00000530516 E2F4Q16254 413 aa8.46□□□□□ -1.06
NUP98-218ENST00000530516 FAM98CQ17RN3 349 aaKnown RBP8.46□□□□□ -1.06
NUP98-218ENST00000530516 CERKQ8TCT0 537 aa8.46□□□□□ -1.06
NUP98-218ENST00000530516 ZFRQ96KR1 1074 aaKnown RBP8.46□□□□□ -1.06
NUP98-218ENST00000530516 WDR70Q9NW82 654 aa8.46□□□□□ -1.06
NUP98-218ENST00000530516 ITGBL1O95965 494 aaPredicted RBP8.45□□□□□ -1.06
NUP98-218ENST00000530516 PACS2Q86VP3 889 aa8.45□□□□□ -1.06
NUP98-218ENST00000530516 DDX12PQ92771 950 aa8.45□□□□□ -1.06
NUP98-218ENST00000530516 MAP3K7O43318 606 aa8.44□□□□□ -1.06
NUP98-218ENST00000530516 NBR1Q14596 966 aa8.44□□□□□ -1.06
NUP98-218ENST00000530516 RBM33Q96EV2 1170 aaKnown RBP8.43□□□□□ -1.06
NUP98-218ENST00000530516 LRCH3Q96II8 777 aa8.42□□□□□ -1.06
NUP98-218ENST00000530516 BCAMP50895 628 aa8.41□□□□□ -1.06
NUP98-218ENST00000530516 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.41□□□□□ -1.06
NUP98-218ENST00000530516 TSR3Q9UJK0 312 aaKnown RBP8.4□□□□□ -1.06
NUP98-218ENST00000530516 PAXIP1Q6ZW49 1069 aaPredicted RBP8.39□□□□□ -1.07
NUP98-218ENST00000530516 SEPT9Q9UHD8 586 aaPredicted RBP8.39□□□□□ -1.07
NUP98-218ENST00000530516 CFAP44Q96MT7 982 aa8.38□□□□□ -1.07
NUP98-218ENST00000530516 RBM27Q9P2N5 1060 aaKnown RBP8.38□□□□□ -1.07
NUP98-218ENST00000530516 KCNC4Q03721 635 aa8.37□□□□□ -1.07
NUP98-218ENST00000530516 NBPF26B4DH59 902 aa8.36□□□□□ -1.07
NUP98-218ENST00000530516 PRSS12P56730 875 aa8.36□□□□□ -1.07
NUP98-218ENST00000530516 TSR1Q2NL82 804 aaKnown RBP8.36□□□□□ -1.07
NUP98-218ENST00000530516 CDCA7LQ96GN5 454 aa8.36□□□□□ -1.07
NUP98-218ENST00000530516 WBP1LQ9NX94 342 aa8.36□□□□□ -1.07
NUP98-218ENST00000530516 TSKSQ9UJT2 592 aa8.36□□□□□ -1.07
NUP98-218ENST00000530516 NECTIN2Q92692 538 aa8.35□□□□□ -1.07
NUP98-218ENST00000530516 IRX2Q9BZI1 471 aaPredicted RBP8.35□□□□□ -1.07
NUP98-218ENST00000530516 HPS5Q9UPZ3 1129 aa8.35□□□□□ -1.07
NUP98-218ENST00000530516 GRXCR2A6NFK2 248 aa8.33□□□□□ -1.08
NUP98-218ENST00000530516 PPP4CP60510 307 aa8.33□□□□□ -1.08
NUP98-218ENST00000530516 HDGFP51858 240 aaKnown RBP8.32□□□□□ -1.08
NUP98-218ENST00000530516 OSBPP22059 807 aa8.3□□□□□ -1.08
NUP98-218ENST00000530516 TATDN2Q93075 761 aa8.3□□□□□ -1.08
NUP98-218ENST00000530516 SLC4A3P48751 1232 aa8.28□□□□□ -1.08
NUP98-218ENST00000530516 SAMD7Q7Z3H4 446 aa8.28□□□□□ -1.08
NUP98-218ENST00000530516 PNMA3Q9UL41 463 aa8.28□□□□□ -1.08
NUP98-218ENST00000530516 PLCB2Q00722 1185 aa8.27□□□□□ -1.09
NUP98-218ENST00000530516 ARHGEF1Q92888 912 aaKnown RBP8.27□□□□□ -1.09
NUP98-218ENST00000530516 TSHZ2Q9NRE2 1034 aa8.26□□□□□ -1.09
NUP98-218ENST00000530516 PRIM1P49642 420 aaKnown RBP8.25□□□□□ -1.09
NUP98-218ENST00000530516 LAPTM4AQ15012 233 aa8.25□□□□□ -1.09
NUP98-218ENST00000530516 TTC13Q8NBP0 860 aa8.25□□□□□ -1.09
NUP98-218ENST00000530516 IL21Q9HBE4 155 aa8.25□□□□□ -1.09
NUP98-218ENST00000530516 FAM198AQ9UFP1 575 aa8.25□□□□□ -1.09
NUP98-218ENST00000530516 SMAPO00193 183 aa8.24□□□□□ -1.09
NUP98-218ENST00000530516 NUDT18Q6ZVK8 323 aa8.24□□□□□ -1.09
NUP98-218ENST00000530516 SLF2Q8IX21 1173 aa8.23□□□□□ -1.09
NUP98-218ENST00000530516 TJAP1Q5JTD0 557 aa8.22□□□□□ -1.09
NUP98-218ENST00000530516 PRR14Q9BWN1 585 aa8.22□□□□□ -1.09
NUP98-218ENST00000530516 CDHR5Q9HBB8 845 aa8.22□□□□□ -1.09
NUP98-218ENST00000530516 P3H3Q8IVL6 736 aa8.2□□□□□ -1.1
NUP98-218ENST00000530516 MTRQ99707 1265 aa8.2□□□□□ -1.1
NUP98-218ENST00000530516 NPDC1Q9NQX5 325 aaPredicted RBP8.2□□□□□ -1.1
NUP98-218ENST00000530516 RNF40O75150 1001 aa8.19□□□□□ -1.1
NUP98-218ENST00000530516 PADI6Q6TGC4 694 aa8.19□□□□□ -1.1
NUP98-218ENST00000530516 GGCXP38435 758 aa8.18□□□□□ -1.1
NUP98-218ENST00000530516 C3orf80F5H4A9 247 aa8.17□□□□□ -1.1
NUP98-218ENST00000530516 V9GY48 417 aaPredicted RBP8.17□□□□□ -1.1
NUP98-218ENST00000530516 SWT1Q5T5J6 900 aaKnown RBP8.16□□□□□ -1.1
NUP98-218ENST00000530516 EYA1Q99502 592 aa8.16□□□□□ -1.1
NUP98-218ENST00000530516 APLP1P51693 650 aa8.15□□□□□ -1.1
NUP98-218ENST00000530516 Q6ZNB5 142 aa8.15□□□□□ -1.1
NUP98-218ENST00000530516 RBM46Q8TBY0 533 aaKnown RBP8.15□□□□□ -1.1
NUP98-218ENST00000530516 KCNV2Q8TDN2 545 aa8.15□□□□□ -1.1
NUP98-218ENST00000530516 DNAJB2P25686 324 aa8.14□□□□□ -1.11
NUP98-218ENST00000530516 PTGDRQ13258 359 aa8.14□□□□□ -1.11
NUP98-218ENST00000530516 TMUB1Q9BVT8 246 aa8.14□□□□□ -1.11
NUP98-218ENST00000530516 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.14□□□□□ -1.11
NUP98-218ENST00000530516 PPP1R18Q6NYC8 613 aa8.13□□□□□ -1.11
NUP98-218ENST00000530516 MLLT3P42568 568 aaPredicted RBP8.12□□□□□ -1.11
NUP98-218ENST00000530516 PRKD2Q9BZL6 878 aa8.12□□□□□ -1.11
NUP98-218ENST00000530516 HAP1P54257 671 aaPredicted RBP8.11□□□□□ -1.11
NUP98-218ENST00000530516 NRG2O14511 850 aaPredicted RBP8.09□□□□□ -1.11
NUP98-218ENST00000530516 GFRA3O60609 400 aa8.09□□□□□ -1.11
NUP98-218ENST00000530516 FCHSD2O94868 740 aa8.09□□□□□ -1.11
NUP98-218ENST00000530516 KMT5BQ4FZB7 885 aa8.09□□□□□ -1.11
NUP98-218ENST00000530516 ZNF516Q92618 1163 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms