RNA–Protein interactions for RNA: ENST00000530459.1

GMDS-207, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-207ENST00000530459 L3MBTL2Q969R5 705 aa6.59□□□□□ -1.35
GMDS-207ENST00000530459 ZNF692Q9BU19 519 aaPredicted RBP6.59□□□□□ -1.35
GMDS-207ENST00000530459 DNAJC5Q9H3Z4 198 aa6.59□□□□□ -1.35
GMDS-207ENST00000530459 CUL7Q14999 1698 aa6.58□□□□□ -1.36
GMDS-207ENST00000530459 ROCK1Q13464 1354 aa6.58□□□□□ -1.36
GMDS-207ENST00000530459 SAMD9Q5K651 1589 aa6.58□□□□□ -1.36
GMDS-207ENST00000530459 ABCB7O75027 752 aa6.58□□□□□ -1.36
GMDS-207ENST00000530459 NPM2Q86SE8 214 aaKnown RBP6.58□□□□□ -1.36
GMDS-207ENST00000530459 EXOC6Q8TAG9 804 aa6.58□□□□□ -1.36
GMDS-207ENST00000530459 RCAN3Q9UKA8 241 aa6.58□□□□□ -1.36
GMDS-207ENST00000530459 GRIN2BQ13224 1484 aa6.58□□□□□ -1.36
GMDS-207ENST00000530459 PLEKHH2Q8IVE3 1493 aa6.58□□□□□ -1.36
GMDS-207ENST00000530459 KIF15Q9NS87 1388 aa6.57□□□□□ -1.36
GMDS-207ENST00000530459 BCORL1Q5H9F3 1711 aa6.57□□□□□ -1.36
GMDS-207ENST00000530459 RALBP1Q15311 655 aa6.57□□□□□ -1.36
GMDS-207ENST00000530459 MPHOSPH9Q99550 1183 aa6.57□□□□□ -1.36
GMDS-207ENST00000530459 E9PCH4 1651 aa6.57□□□□□ -1.36
GMDS-207ENST00000530459 FHOD3Q2V2M9 1422 aa6.57□□□□□ -1.36
GMDS-207ENST00000530459 KDM5CP41229 1560 aa6.57□□□□□ -1.36
GMDS-207ENST00000530459 MTUS2Q5JR59 1369 aa6.57□□□□□ -1.36
GMDS-207ENST00000530459 LRRIQ1Q96JM4 1722 aa6.56□□□□□ -1.36
GMDS-207ENST00000530459 KDM2BQ8NHM5 1336 aa6.56□□□□□ -1.36
GMDS-207ENST00000530459 CENPJQ9HC77 1338 aaPredicted RBP6.56□□□□□ -1.36
GMDS-207ENST00000530459 VIRMAQ69YN4 1812 aaKnown RBP6.56□□□□□ -1.36
GMDS-207ENST00000530459 PLEKHG5O94827 1062 aa6.56□□□□□ -1.36
GMDS-207ENST00000530459 CLCN1P35523 988 aa6.56□□□□□ -1.36
GMDS-207ENST00000530459 NBPF8Q3BBV2 869 aa6.56□□□□□ -1.36
GMDS-207ENST00000530459 HS6ST3Q8IZP7 471 aa6.56□□□□□ -1.36
GMDS-207ENST00000530459 DCAF11Q8TEB1 546 aa6.56□□□□□ -1.36
GMDS-207ENST00000530459 KIF14Q15058 1648 aa6.56□□□□□ -1.36
GMDS-207ENST00000530459 UHRF1BP1Q6BDS2 1440 aa6.56□□□□□ -1.36
GMDS-207ENST00000530459 MYBBP1AQ9BQG0 1328 aaKnown RBP6.55□□□□□ -1.36
GMDS-207ENST00000530459 GAPVD1Q14C86 1478 aa6.55□□□□□ -1.36
GMDS-207ENST00000530459 FAM161AQ3B820 660 aa6.55□□□□□ -1.36
GMDS-207ENST00000530459 CENPQQ7L2Z9 268 aaPredicted RBP6.55□□□□□ -1.36
GMDS-207ENST00000530459 ZMYND15Q9H091 742 aa6.55□□□□□ -1.36
GMDS-207ENST00000530459 DAXXQ9UER7 740 aaPredicted RBP6.55□□□□□ -1.36
GMDS-207ENST00000530459 CCDC144AA2RUR9 1427 aa6.55□□□□□ -1.36
GMDS-207ENST00000530459 KDM6BO15054 1643 aa6.54□□□□□ -1.36
GMDS-207ENST00000530459 BLMP54132 1417 aaPredicted RBP6.53□□□□□ -1.36
GMDS-207ENST00000530459 SPDYE2BA6NHP3 402 aa6.53□□□□□ -1.36
GMDS-207ENST00000530459 SPDYE6P0CI01 402 aa6.53□□□□□ -1.36
GMDS-207ENST00000530459 CACNB1Q02641 598 aaPredicted RBP6.53□□□□□ -1.36
GMDS-207ENST00000530459 SPDYE2Q495Y8 402 aa6.53□□□□□ -1.36
GMDS-207ENST00000530459 C8orf34Q49A92 452 aa6.53□□□□□ -1.36
GMDS-207ENST00000530459 PABPN1Q86U42 306 aaKnown RBP eCLIP6.53□□□□□ -1.36
GMDS-207ENST00000530459 TMC1Q8TDI8 760 aa6.53□□□□□ -1.36
GMDS-207ENST00000530459 RRAGDQ9NQL2 400 aaPredicted RBP6.53□□□□□ -1.36
GMDS-207ENST00000530459 ABCA10Q8WWZ4 1543 aa6.53□□□□□ -1.36
GMDS-207ENST00000530459 ZMYM3Q14202 1370 aa6.53□□□□□ -1.36
GMDS-207ENST00000530459 RALGAPBQ86X10 1494 aa6.53□□□□□ -1.36
GMDS-207ENST00000530459 ARHGEF12Q9NZN5 1544 aa6.52□□□□□ -1.37
GMDS-207ENST00000530459 FSD2A1L4K1 749 aa6.52□□□□□ -1.37
GMDS-207ENST00000530459 FRAT2O75474 233 aaPredicted RBP6.52□□□□□ -1.37
GMDS-207ENST00000530459 HSP90AA2PQ14568 343 aaPredicted RBP6.52□□□□□ -1.37
GMDS-207ENST00000530459 ISY1Q9ULR0 285 aaKnown RBP6.52□□□□□ -1.37
GMDS-207ENST00000530459 SSUH2Q9Y2M2 353 aa6.52□□□□□ -1.37
GMDS-207ENST00000530459 USP47Q96K76 1375 aa6.52□□□□□ -1.37
GMDS-207ENST00000530459 HSP90AA1P07900 732 aaKnown RBP6.51□□□□□ -1.37
GMDS-207ENST00000530459 OSCARQ8IYS5 282 aa6.51□□□□□ -1.37
GMDS-207ENST00000530459 PARD3Q8TEW0 1356 aa6.51□□□□□ -1.37
GMDS-207ENST00000530459 DNMT1P26358 1616 aaKnown RBP6.5□□□□□ -1.37
GMDS-207ENST00000530459 EIF3AQ14152 1382 aaKnown RBP6.5□□□□□ -1.37
GMDS-207ENST00000530459 NLRP13Q86W25 1043 aa6.5□□□□□ -1.37
GMDS-207ENST00000530459 RNF39Q9H2S5 420 aa6.5□□□□□ -1.37
GMDS-207ENST00000530459 PNNQ9H307 717 aaKnown RBP6.5□□□□□ -1.37
GMDS-207ENST00000530459 MAGI3Q5TCQ9 1506 aa6.5□□□□□ -1.37
GMDS-207ENST00000530459 CLASP1Q7Z460 1538 aa6.5□□□□□ -1.37
GMDS-207ENST00000530459 TPM2P07951 284 aa6.49□□□□□ -1.37
GMDS-207ENST00000530459 ARXQ96QS3 562 aa6.49□□□□□ -1.37
GMDS-207ENST00000530459 CRBNQ96SW2 442 aa6.49□□□□□ -1.37
GMDS-207ENST00000530459 PZPP20742 1482 aa6.48□□□□□ -1.37
GMDS-207ENST00000530459 TERF1P54274 439 aa6.48□□□□□ -1.37
GMDS-207ENST00000530459 BECN1Q14457 450 aa6.48□□□□□ -1.37
GMDS-207ENST00000530459 PDCL3Q9H2J4 239 aa6.48□□□□□ -1.37
GMDS-207ENST00000530459 ANTXR1Q9H6X2 564 aa6.48□□□□□ -1.37
GMDS-207ENST00000530459 RRP7BPQ9NSQ0 103 aa6.48□□□□□ -1.37
GMDS-207ENST00000530459 DAPK1P53355 1430 aa6.48□□□□□ -1.37
GMDS-207ENST00000530459 KIAA1107Q9UPP5 1409 aa6.48□□□□□ -1.37
GMDS-207ENST00000530459 DNMBPQ6XZF7 1577 aa6.48□□□□□ -1.37
GMDS-207ENST00000530459 USP19O94966 1318 aa6.48□□□□□ -1.37
GMDS-207ENST00000530459 CADPSQ9ULU8 1353 aa6.47□□□□□ -1.37
GMDS-207ENST00000530459 CALD1Q05682 793 aaKnown RBP6.47□□□□□ -1.37
GMDS-207ENST00000530459 POGKQ9P215 609 aa6.47□□□□□ -1.37
GMDS-207ENST00000530459 SCAPERQ9BY12 1400 aa6.47□□□□□ -1.37
GMDS-207ENST00000530459 LAMC1P11047 1609 aa6.47□□□□□ -1.37
GMDS-207ENST00000530459 ZNF608Q9ULD9 1512 aaPredicted RBP6.46□□□□□ -1.37
GMDS-207ENST00000530459 GOLGA6L3A6NEY3 463 aa6.46□□□□□ -1.38
GMDS-207ENST00000530459 XRCC6P12956 609 aaKnown RBP eCLIP6.46□□□□□ -1.38
GMDS-207ENST00000530459 SLC4A3P48751 1232 aa6.46□□□□□ -1.38
GMDS-207ENST00000530459 MRE11P49959 708 aa6.46□□□□□ -1.38
GMDS-207ENST00000530459 P3H3Q8IVL6 736 aa6.46□□□□□ -1.38
GMDS-207ENST00000530459 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.46□□□□□ -1.38
GMDS-207ENST00000530459 ADGRL2O95490 1459 aa6.46□□□□□ -1.38
GMDS-207ENST00000530459 NLRP1Q9C000 1473 aa6.46□□□□□ -1.38
GMDS-207ENST00000530459 ADGBQ8N7X0 1667 aa6.45□□□□□ -1.38
GMDS-207ENST00000530459 ABCC5O15440 1437 aa6.45□□□□□ -1.38
GMDS-207ENST00000530459 C1QBPQ07021 282 aaKnown RBP6.45□□□□□ -1.38
GMDS-207ENST00000530459 AAMPQ13685 434 aa6.45□□□□□ -1.38
GMDS-207ENST00000530459 RNF25Q96BH1 459 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms