RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 ZMYND10O75800 440 aa10.28□□□□□ -0.76
AMBRA1-209ENST00000529963 ZCCHC6Q5VYS8 1495 aaKnown RBP10.28□□□□□ -0.76
AMBRA1-209ENST00000529963 FBXW7Q969H0 707 aa10.27□□□□□ -0.77
AMBRA1-209ENST00000529963 SLC24A3Q9HC58 644 aa10.27□□□□□ -0.77
AMBRA1-209ENST00000529963 CECR2Q9BXF3 1484 aa10.26□□□□□ -0.77
AMBRA1-209ENST00000529963 DCAF1Q9Y4B6 1507 aa10.25□□□□□ -0.77
AMBRA1-209ENST00000529963 FECHP22830 423 aa10.25□□□□□ -0.77
AMBRA1-209ENST00000529963 PPP4R3BQ5MIZ7 849 aa10.25□□□□□ -0.77
AMBRA1-209ENST00000529963 EMP3P54852 163 aa10.24□□□□□ -0.77
AMBRA1-209ENST00000529963 PTGDRQ13258 359 aa10.24□□□□□ -0.77
AMBRA1-209ENST00000529963 C6orf132Q5T0Z8 1188 aa10.24□□□□□ -0.77
AMBRA1-209ENST00000529963 BARGINQ6ZT62 677 aa10.24□□□□□ -0.77
AMBRA1-209ENST00000529963 NPDC1Q9NQX5 325 aaPredicted RBP10.24□□□□□ -0.77
AMBRA1-209ENST00000529963 ERBB3P21860 1342 aa10.24□□□□□ -0.77
AMBRA1-209ENST00000529963 FCHSD2O94868 740 aa10.23□□□□□ -0.77
AMBRA1-209ENST00000529963 VARS2Q5ST30 1063 aaKnown RBP10.23□□□□□ -0.77
AMBRA1-209ENST00000529963 KRI1Q8N9T8 703 aaKnown RBP10.23□□□□□ -0.77
AMBRA1-209ENST00000529963 SHROOM4Q9ULL8 1493 aa10.23□□□□□ -0.77
AMBRA1-209ENST00000529963 LCE2DQ5TA82 110 aaPredicted RBP10.23□□□□□ -0.77
AMBRA1-209ENST00000529963 FAM205CA6NFA0 338 aa10.22□□□□□ -0.77
AMBRA1-209ENST00000529963 PSDA5PKW4 1024 aaPredicted RBP10.2□□□□□ -0.78
AMBRA1-209ENST00000529963 GNPATO15228 680 aa10.2□□□□□ -0.78
AMBRA1-209ENST00000529963 COL9A1P20849 921 aa10.2□□□□□ -0.78
AMBRA1-209ENST00000529963 HIC1Q14526 733 aa10.19□□□□□ -0.78
AMBRA1-209ENST00000529963 BCL2L12Q9HB09 334 aa10.18□□□□□ -0.78
AMBRA1-209ENST00000529963 CC2D2AQ9P2K1 1620 aa10.18□□□□□ -0.78
AMBRA1-209ENST00000529963 POTEB3A0JP26 581 aa10.17□□□□□ -0.78
AMBRA1-209ENST00000529963 POTEBQ6S5H4 581 aa10.17□□□□□ -0.78
AMBRA1-209ENST00000529963 KCNK17Q96T54 332 aa10.17□□□□□ -0.78
AMBRA1-209ENST00000529963 AXIN2Q9Y2T1 843 aa10.17□□□□□ -0.78
AMBRA1-209ENST00000529963 PTPREP23469 700 aa10.16□□□□□ -0.78
AMBRA1-209ENST00000529963 PSEN2P49810 448 aa10.16□□□□□ -0.78
AMBRA1-209ENST00000529963 FAM161AQ3B820 660 aa10.16□□□□□ -0.78
AMBRA1-209ENST00000529963 SCRIBQ14160 1630 aa10.15□□□□□ -0.78
AMBRA1-209ENST00000529963 POTEEQ6S8J3 1075 aa10.14□□□□□ -0.79
AMBRA1-209ENST00000529963 PADI6Q6TGC4 694 aa10.14□□□□□ -0.79
AMBRA1-209ENST00000529963 HS3ST6Q96QI5 342 aa10.14□□□□□ -0.79
AMBRA1-209ENST00000529963 MAP2K5Q13163 448 aa10.13□□□□□ -0.79
AMBRA1-209ENST00000529963 CCDC102AQ96A19 550 aa10.13□□□□□ -0.79
AMBRA1-209ENST00000529963 IRF6O14896 467 aa10.12□□□□□ -0.79
AMBRA1-209ENST00000529963 AK7Q96M32 723 aa10.12□□□□□ -0.79
AMBRA1-209ENST00000529963 CDCA7LQ96GN5 454 aa10.12□□□□□ -0.79
AMBRA1-209ENST00000529963 MINK1Q8N4C8 1332 aaPredicted RBP10.11□□□□□ -0.79
AMBRA1-209ENST00000529963 PPP1R3GB7ZBB8 358 aa10.11□□□□□ -0.79
AMBRA1-209ENST00000529963 PRSS12P56730 875 aa10.11□□□□□ -0.79
AMBRA1-209ENST00000529963 CERKQ8TCT0 537 aa10.11□□□□□ -0.79
AMBRA1-209ENST00000529963 FAM198AQ9UFP1 575 aa10.11□□□□□ -0.79
AMBRA1-209ENST00000529963 PROX2Q3B8N5 592 aa10.1□□□□□ -0.79
AMBRA1-209ENST00000529963 TRIM66O15016 1216 aa10.09□□□□□ -0.79
AMBRA1-209ENST00000529963 DMRTA1Q5VZB9 504 aa10.09□□□□□ -0.79
AMBRA1-209ENST00000529963 ZNF687Q8N1G0 1237 aa10.08□□□□□ -0.8
AMBRA1-209ENST00000529963 TSKSQ9UJT2 592 aa10.08□□□□□ -0.8
AMBRA1-209ENST00000529963 EIF4G1Q04637 1599 aaKnown RBP10.08□□□□□ -0.8
AMBRA1-209ENST00000529963 C3orf80F5H4A9 247 aa10.07□□□□□ -0.8
AMBRA1-209ENST00000529963 ARHGAP33O14559 1287 aa10.07□□□□□ -0.8
AMBRA1-209ENST00000529963 BRPF1P55201 1214 aaPredicted RBP10.07□□□□□ -0.8
AMBRA1-209ENST00000529963 NLRP7Q8WX94 980 aa10.07□□□□□ -0.8
AMBRA1-209ENST00000529963 KCNH8Q96L42 1107 aa10.07□□□□□ -0.8
AMBRA1-209ENST00000529963 PHOX2BQ99453 314 aa10.07□□□□□ -0.8
AMBRA1-209ENST00000529963 NEUROD2Q15784 382 aa10.06□□□□□ -0.8
AMBRA1-209ENST00000529963 TTC13Q8NBP0 860 aa10.06□□□□□ -0.8
AMBRA1-209ENST00000529963 ZBED2Q9BTP6 218 aa10.05□□□□□ -0.8
AMBRA1-209ENST00000529963 GPBP1L1Q9HC44 474 aaPredicted RBP10.05□□□□□ -0.8
AMBRA1-209ENST00000529963 ADGRG1Q9Y653 693 aa10.05□□□□□ -0.8
AMBRA1-209ENST00000529963 SMAPO00193 183 aa10.04□□□□□ -0.8
AMBRA1-209ENST00000529963 PDE4DQ08499 809 aa10.04□□□□□ -0.8
AMBRA1-209ENST00000529963 CUX2O14529 1486 aa10.04□□□□□ -0.8
AMBRA1-209ENST00000529963 TRIM6-TRIM34B2RNG4 842 aa10.03□□□□□ -0.8
AMBRA1-209ENST00000529963 RBM27Q9P2N5 1060 aaKnown RBP10.03□□□□□ -0.8
AMBRA1-209ENST00000529963 NUDT18Q6ZVK8 323 aa10.02□□□□□ -0.81
AMBRA1-209ENST00000529963 METTL3Q86U44 580 aaKnown RBP10.02□□□□□ -0.81
AMBRA1-209ENST00000529963 KIAA1468Q9P260 1216 aa10.02□□□□□ -0.81
AMBRA1-209ENST00000529963 PBX2P40425 430 aa10.01□□□□□ -0.81
AMBRA1-209ENST00000529963 PNMA3Q9UL41 463 aa10.01□□□□□ -0.81
AMBRA1-209ENST00000529963 PXYLP1Q8TE99 480 aa10□□□□□ -0.81
AMBRA1-209ENST00000529963 MDM2Q00987 491 aaPredicted RBP9.99□□□□□ -0.81
AMBRA1-209ENST00000529963 PACS2Q86VP3 889 aa9.99□□□□□ -0.81
AMBRA1-209ENST00000529963 OATP04181 439 aa9.98□□□□□ -0.81
AMBRA1-209ENST00000529963 TTLL12Q14166 644 aaPredicted RBP9.98□□□□□ -0.81
AMBRA1-209ENST00000529963 TATDN2Q93075 761 aa9.98□□□□□ -0.81
AMBRA1-209ENST00000529963 REPIN1Q9BWE0 567 aaKnown RBP9.98□□□□□ -0.81
AMBRA1-209ENST00000529963 VPS9D1Q9Y2B5 631 aa9.98□□□□□ -0.81
AMBRA1-209ENST00000529963 AMHR2Q16671 573 aa9.97□□□□□ -0.81
AMBRA1-209ENST00000529963 PARP9Q8IXQ6 854 aa9.97□□□□□ -0.81
AMBRA1-209ENST00000529963 EYA1Q99502 592 aa9.97□□□□□ -0.81
AMBRA1-209ENST00000529963 SEPT9Q9UHD8 586 aaPredicted RBP9.97□□□□□ -0.81
AMBRA1-209ENST00000529963 NBPF26B4DH59 902 aa9.97□□□□□ -0.81
AMBRA1-209ENST00000529963 ANKRD13DQ6ZTN6 518 aa9.97□□□□□ -0.81
AMBRA1-209ENST00000529963 RBM46Q8TBY0 533 aaKnown RBP9.97□□□□□ -0.81
AMBRA1-209ENST00000529963 LSM11P83369 360 aaKnown RBP eCLIP9.96□□□□□ -0.82
AMBRA1-209ENST00000529963 POTEGQ6S5H5 508 aa9.96□□□□□ -0.82
AMBRA1-209ENST00000529963 KDM4CQ9H3R0 1056 aa9.96□□□□□ -0.82
AMBRA1-209ENST00000529963 RCCD1A6NED2 376 aa9.95□□□□□ -0.82
AMBRA1-209ENST00000529963 RABGEF1Q9UJ41 708 aa9.94□□□□□ -0.82
AMBRA1-209ENST00000529963 POTEMA6NI47 508 aa9.93□□□□□ -0.82
AMBRA1-209ENST00000529963 ONECUT3O60422 494 aaPredicted RBP9.93□□□□□ -0.82
AMBRA1-209ENST00000529963 GIGYF2Q6Y7W6 1299 aaKnown RBP9.93□□□□□ -0.82
AMBRA1-209ENST00000529963 SLC4A5Q9BY07 1137 aa9.93□□□□□ -0.82
AMBRA1-209ENST00000529963 ADGRD1Q6QNK2 874 aa9.92□□□□□ -0.82
AMBRA1-209ENST00000529963 KRTAP3-3Q9BYR6 98 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms