RNA–Protein interactions for RNA: ENST00000529088.1

LINC02553-201, Transcript of long intergenic non-protein coding RNA 2553, humanhuman

TSL 5 BASIC

Gene LINC02553, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02553-201ENST00000529088 RABGEF1Q9UJ41 708 aa12.16□□□□□ -0.46
LINC02553-201ENST00000529088 BCAMP50895 628 aa12.15□□□□□ -0.46
LINC02553-201ENST00000529088 DDX12PQ92771 950 aa12.15□□□□□ -0.46
LINC02553-201ENST00000529088 FBXW7Q969H0 707 aa12.14□□□□□ -0.47
LINC02553-201ENST00000529088 KIAA1468Q9P260 1216 aa12.14□□□□□ -0.47
LINC02553-201ENST00000529088 C6orf132Q5T0Z8 1188 aa12.13□□□□□ -0.47
LINC02553-201ENST00000529088 SEPT9Q9UHD8 586 aaPredicted RBP12.12□□□□□ -0.47
LINC02553-201ENST00000529088 ANKK1Q8NFD2 765 aa12.1□□□□□ -0.47
LINC02553-201ENST00000529088 BBXQ8WY36 941 aaPredicted RBP12.09□□□□□ -0.47
LINC02553-201ENST00000529088 ZFRQ96KR1 1074 aaKnown RBP12.07□□□□□ -0.48
LINC02553-201ENST00000529088 EPAS1Q99814 870 aa12.07□□□□□ -0.48
LINC02553-201ENST00000529088 A0A0G2JS52 829 aa12.06□□□□□ -0.48
LINC02553-201ENST00000529088 TSR1Q2NL82 804 aaKnown RBP12.06□□□□□ -0.48
LINC02553-201ENST00000529088 SOWAHBA6NEL2 793 aa12.04□□□□□ -0.48
LINC02553-201ENST00000529088 TRIM6-TRIM34B2RNG4 842 aa12.04□□□□□ -0.48
LINC02553-201ENST00000529088 NBR1Q14596 966 aa12.04□□□□□ -0.48
LINC02553-201ENST00000529088 IFFO2Q5TF58 517 aa12.04□□□□□ -0.48
LINC02553-201ENST00000529088 WBP1LQ9NX94 342 aa12.04□□□□□ -0.48
LINC02553-201ENST00000529088 LAPTM4BQ86VI4 370 aa12.02□□□□□ -0.49
LINC02553-201ENST00000529088 MAP3K7O43318 606 aa12□□□□□ -0.49
LINC02553-201ENST00000529088 SPRYD3Q8NCJ5 442 aa12□□□□□ -0.49
LINC02553-201ENST00000529088 PRIM1P49642 420 aaKnown RBP11.99□□□□□ -0.49
LINC02553-201ENST00000529088 EN1Q05925 392 aaPredicted RBP11.99□□□□□ -0.49
LINC02553-201ENST00000529088 TSKSQ9UJT2 592 aa11.99□□□□□ -0.49
LINC02553-201ENST00000529088 PDIA6Q15084 440 aa11.98□□□□□ -0.49
LINC02553-201ENST00000529088 ONECUT3O60422 494 aaPredicted RBP11.97□□□□□ -0.49
LINC02553-201ENST00000529088 FAM98CQ17RN3 349 aaKnown RBP11.97□□□□□ -0.49
LINC02553-201ENST00000529088 SMAPO00193 183 aa11.96□□□□□ -0.49
LINC02553-201ENST00000529088 ITGBL1O95965 494 aaPredicted RBP11.96□□□□□ -0.49
LINC02553-201ENST00000529088 CFAP44Q96MT7 982 aa11.96□□□□□ -0.49
LINC02553-201ENST00000529088 GRXCR2A6NFK2 248 aa11.94□□□□□ -0.5
LINC02553-201ENST00000529088 IRX2Q9BZI1 471 aaPredicted RBP11.94□□□□□ -0.5
LINC02553-201ENST00000529088 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.94□□□□□ -0.5
LINC02553-201ENST00000529088 HPS5Q9UPZ3 1129 aa11.94□□□□□ -0.5
LINC02553-201ENST00000529088 C3orf80F5H4A9 247 aa11.93□□□□□ -0.5
LINC02553-201ENST00000529088 PAXIP1Q6ZW49 1069 aaPredicted RBP11.93□□□□□ -0.5
LINC02553-201ENST00000529088 FAM198AQ9UFP1 575 aa11.93□□□□□ -0.5
LINC02553-201ENST00000529088 RGS20O76081 388 aa11.92□□□□□ -0.5
LINC02553-201ENST00000529088 E2F4Q16254 413 aa11.92□□□□□ -0.5
LINC02553-201ENST00000529088 LRCH3Q96II8 777 aa11.92□□□□□ -0.5
LINC02553-201ENST00000529088 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.92□□□□□ -0.5
LINC02553-201ENST00000529088 PACS2Q86VP3 889 aa11.9□□□□□ -0.5
LINC02553-201ENST00000529088 CDCA7LQ96GN5 454 aa11.9□□□□□ -0.5
LINC02553-201ENST00000529088 RTN4Q9NQC3 1192 aaKnown RBP11.9□□□□□ -0.5
LINC02553-201ENST00000529088 TSR3Q9UJK0 312 aaKnown RBP11.9□□□□□ -0.5
LINC02553-201ENST00000529088 SPDYE16A6NNV3 312 aaPredicted RBP11.89□□□□□ -0.51
LINC02553-201ENST00000529088 KCNC4Q03721 635 aa11.88□□□□□ -0.51
LINC02553-201ENST00000529088 CDHR5Q9HBB8 845 aa11.88□□□□□ -0.51
LINC02553-201ENST00000529088 NYAP1Q6ZVC0 841 aa11.87□□□□□ -0.51
LINC02553-201ENST00000529088 PRSS12P56730 875 aa11.86□□□□□ -0.51
LINC02553-201ENST00000529088 SAMD7Q7Z3H4 446 aa11.86□□□□□ -0.51
LINC02553-201ENST00000529088 WDR70Q9NW82 654 aa11.86□□□□□ -0.51
LINC02553-201ENST00000529088 OSBPP22059 807 aa11.83□□□□□ -0.52
LINC02553-201ENST00000529088 PPP4CP60510 307 aa11.83□□□□□ -0.52
LINC02553-201ENST00000529088 PNMA3Q9UL41 463 aa11.83□□□□□ -0.52
LINC02553-201ENST00000529088 TATDN2Q93075 761 aa11.82□□□□□ -0.52
LINC02553-201ENST00000529088 AMER1Q5JTC6 1135 aaPredicted RBP11.81□□□□□ -0.52
LINC02553-201ENST00000529088 NUDT18Q6ZVK8 323 aa11.79□□□□□ -0.52
LINC02553-201ENST00000529088 ARIH1Q9Y4X5 557 aaPredicted RBP11.79□□□□□ -0.52
LINC02553-201ENST00000529088 RNF40O75150 1001 aa11.78□□□□□ -0.52
LINC02553-201ENST00000529088 NBPF26B4DH59 902 aa11.76□□□□□ -0.53
LINC02553-201ENST00000529088 TJAP1Q5JTD0 557 aa11.76□□□□□ -0.53
LINC02553-201ENST00000529088 CERKQ8TCT0 537 aa11.76□□□□□ -0.53
LINC02553-201ENST00000529088 MTRQ99707 1265 aa11.74□□□□□ -0.53
LINC02553-201ENST00000529088 PADI6Q6TGC4 694 aa11.73□□□□□ -0.53
LINC02553-201ENST00000529088 Q6ZNB5 142 aa11.73□□□□□ -0.53
LINC02553-201ENST00000529088 ZNF516Q92618 1163 aa11.72□□□□□ -0.53
LINC02553-201ENST00000529088 NPDC1Q9NQX5 325 aaPredicted RBP11.72□□□□□ -0.53
LINC02553-201ENST00000529088 APLP1P51693 650 aa11.71□□□□□ -0.53
LINC02553-201ENST00000529088 MLLT3P42568 568 aaPredicted RBP11.68□□□□□ -0.54
LINC02553-201ENST00000529088 SWT1Q5T5J6 900 aaKnown RBP11.68□□□□□ -0.54
LINC02553-201ENST00000529088 TSHZ2Q9NRE2 1034 aa11.68□□□□□ -0.54
LINC02553-201ENST00000529088 PPP1R18Q6NYC8 613 aa11.67□□□□□ -0.54
LINC02553-201ENST00000529088 NKX2-3Q8TAU0 364 aa11.67□□□□□ -0.54
LINC02553-201ENST00000529088 IL21Q9HBE4 155 aa11.67□□□□□ -0.54
LINC02553-201ENST00000529088 TTC13Q8NBP0 860 aa11.66□□□□□ -0.54
LINC02553-201ENST00000529088 HDGFP51858 240 aaKnown RBP11.65□□□□□ -0.54
LINC02553-201ENST00000529088 PRKD2Q9BZL6 878 aa11.65□□□□□ -0.54
LINC02553-201ENST00000529088 RBM27Q9P2N5 1060 aaKnown RBP11.65□□□□□ -0.54
LINC02553-201ENST00000529088 COPS2P61201 443 aa11.64□□□□□ -0.55
LINC02553-201ENST00000529088 LCE2BO14633 110 aa11.63□□□□□ -0.55
LINC02553-201ENST00000529088 GFRA3O60609 400 aa11.63□□□□□ -0.55
LINC02553-201ENST00000529088 KCNV2Q8TDN2 545 aa11.61□□□□□ -0.55
LINC02553-201ENST00000529088 EYA1Q99502 592 aa11.6□□□□□ -0.55
LINC02553-201ENST00000529088 FAM161AQ3B820 660 aa11.57□□□□□ -0.56
LINC02553-201ENST00000529088 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.57□□□□□ -0.56
LINC02553-201ENST00000529088 SLF2Q8IX21 1173 aa11.56□□□□□ -0.56
LINC02553-201ENST00000529088 ARHGEF1Q92888 912 aaKnown RBP11.55□□□□□ -0.56
LINC02553-201ENST00000529088 PTGDRQ13258 359 aa11.53□□□□□ -0.56
LINC02553-201ENST00000529088 LAPTM4AQ15012 233 aa11.51□□□□□ -0.57
LINC02553-201ENST00000529088 TRAF7Q6Q0C0 670 aa11.51□□□□□ -0.57
LINC02553-201ENST00000529088 NUTM2FA1L443 756 aa11.5□□□□□ -0.57
LINC02553-201ENST00000529088 ZPR1O75312 459 aa11.5□□□□□ -0.57
LINC02553-201ENST00000529088 BLOC1S3Q6QNY0 202 aa11.5□□□□□ -0.57
LINC02553-201ENST00000529088 PCDHB3Q9Y5E6 796 aa11.49□□□□□ -0.57
LINC02553-201ENST00000529088 V9GY48 417 aaPredicted RBP11.49□□□□□ -0.57
LINC02553-201ENST00000529088 TLL1O43897 1013 aa11.48□□□□□ -0.57
LINC02553-201ENST00000529088 ADGRG1Q9Y653 693 aa11.48□□□□□ -0.57
LINC02553-201ENST00000529088 NECTIN2Q92692 538 aa11.47□□□□□ -0.57
LINC02553-201ENST00000529088 NRG2O14511 850 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms