RNA–Protein interactions for RNA: ENST00000528853.1

PPFIA1-212, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-212ENST00000528853 CFAP44Q96MT7 982 aa11.5□□□□□ -0.57
PPFIA1-212ENST00000528853 A0A0G2JS52 829 aa11.49□□□□□ -0.57
PPFIA1-212ENST00000528853 PAXIP1Q6ZW49 1069 aaPredicted RBP11.49□□□□□ -0.57
PPFIA1-212ENST00000528853 RABGEF1Q9UJ41 708 aa11.49□□□□□ -0.57
PPFIA1-212ENST00000528853 COL9A1P20849 921 aa11.48□□□□□ -0.57
PPFIA1-212ENST00000528853 PROX2Q3B8N5 592 aa11.48□□□□□ -0.57
PPFIA1-212ENST00000528853 TYW1BQ6NUM6 668 aa11.48□□□□□ -0.57
PPFIA1-212ENST00000528853 FBXW7Q969H0 707 aa11.48□□□□□ -0.57
PPFIA1-212ENST00000528853 PHF14O94880 888 aa11.47□□□□□ -0.57
PPFIA1-212ENST00000528853 CAMK2BQ13554 666 aa11.46□□□□□ -0.57
PPFIA1-212ENST00000528853 ANKK1Q8NFD2 765 aa11.45□□□□□ -0.58
PPFIA1-212ENST00000528853 WDR70Q9NW82 654 aa11.45□□□□□ -0.58
PPFIA1-212ENST00000528853 LAPTM4BQ86VI4 370 aa11.42□□□□□ -0.58
PPFIA1-212ENST00000528853 DPYSL4O14531 572 aa11.41□□□□□ -0.58
PPFIA1-212ENST00000528853 EPAS1Q99814 870 aa11.4□□□□□ -0.58
PPFIA1-212ENST00000528853 IRX2Q9BZI1 471 aaPredicted RBP11.4□□□□□ -0.58
PPFIA1-212ENST00000528853 KIAA1468Q9P260 1216 aa11.4□□□□□ -0.58
PPFIA1-212ENST00000528853 SOWAHBA6NEL2 793 aa11.39□□□□□ -0.59
PPFIA1-212ENST00000528853 ONECUT3O60422 494 aaPredicted RBP11.39□□□□□ -0.59
PPFIA1-212ENST00000528853 BCAMP50895 628 aa11.39□□□□□ -0.59
PPFIA1-212ENST00000528853 ITGBL1O95965 494 aaPredicted RBP11.38□□□□□ -0.59
PPFIA1-212ENST00000528853 C6orf132Q5T0Z8 1188 aa11.38□□□□□ -0.59
PPFIA1-212ENST00000528853 E2F4Q16254 413 aa11.36□□□□□ -0.59
PPFIA1-212ENST00000528853 NYAP1Q6ZVC0 841 aa11.36□□□□□ -0.59
PPFIA1-212ENST00000528853 ZFRQ96KR1 1074 aaKnown RBP11.36□□□□□ -0.59
PPFIA1-212ENST00000528853 SPDYE16A6NNV3 312 aaPredicted RBP11.35□□□□□ -0.59
PPFIA1-212ENST00000528853 SEPT9Q9UHD8 586 aaPredicted RBP11.34□□□□□ -0.59
PPFIA1-212ENST00000528853 TRIM6-TRIM34B2RNG4 842 aa11.33□□□□□ -0.6
PPFIA1-212ENST00000528853 RBM33Q96EV2 1170 aaKnown RBP11.31□□□□□ -0.6
PPFIA1-212ENST00000528853 WBP1LQ9NX94 342 aa11.31□□□□□ -0.6
PPFIA1-212ENST00000528853 PDIA6Q15084 440 aa11.3□□□□□ -0.6
PPFIA1-212ENST00000528853 FAM98CQ17RN3 349 aaKnown RBP11.3□□□□□ -0.6
PPFIA1-212ENST00000528853 DDX12PQ92771 950 aa11.3□□□□□ -0.6
PPFIA1-212ENST00000528853 KCNC4Q03721 635 aa11.27□□□□□ -0.61
PPFIA1-212ENST00000528853 NBR1Q14596 966 aa11.26□□□□□ -0.61
PPFIA1-212ENST00000528853 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.26□□□□□ -0.61
PPFIA1-212ENST00000528853 TSR3Q9UJK0 312 aaKnown RBP11.26□□□□□ -0.61
PPFIA1-212ENST00000528853 ARIH1Q9Y4X5 557 aaPredicted RBP11.26□□□□□ -0.61
PPFIA1-212ENST00000528853 LRCH3Q96II8 777 aa11.25□□□□□ -0.61
PPFIA1-212ENST00000528853 MAP3K7O43318 606 aa11.24□□□□□ -0.61
PPFIA1-212ENST00000528853 EN1Q05925 392 aaPredicted RBP11.24□□□□□ -0.61
PPFIA1-212ENST00000528853 HPS5Q9UPZ3 1129 aa11.24□□□□□ -0.61
PPFIA1-212ENST00000528853 TSR1Q2NL82 804 aaKnown RBP11.22□□□□□ -0.61
PPFIA1-212ENST00000528853 PACS2Q86VP3 889 aa11.22□□□□□ -0.61
PPFIA1-212ENST00000528853 TSKSQ9UJT2 592 aa11.21□□□□□ -0.61
PPFIA1-212ENST00000528853 GRXCR2A6NFK2 248 aa11.18□□□□□ -0.62
PPFIA1-212ENST00000528853 CERKQ8TCT0 537 aa11.18□□□□□ -0.62
PPFIA1-212ENST00000528853 PPP4CP60510 307 aa11.15□□□□□ -0.62
PPFIA1-212ENST00000528853 CDCA7LQ96GN5 454 aa11.15□□□□□ -0.62
PPFIA1-212ENST00000528853 PRSS12P56730 875 aa11.14□□□□□ -0.63
PPFIA1-212ENST00000528853 Q6ZNB5 142 aa11.14□□□□□ -0.63
PPFIA1-212ENST00000528853 TSHZ2Q9NRE2 1034 aa11.14□□□□□ -0.63
PPFIA1-212ENST00000528853 SMAPO00193 183 aa11.12□□□□□ -0.63
PPFIA1-212ENST00000528853 SAMD7Q7Z3H4 446 aa11.12□□□□□ -0.63
PPFIA1-212ENST00000528853 ARHGEF1Q92888 912 aaKnown RBP11.12□□□□□ -0.63
PPFIA1-212ENST00000528853 FAM198AQ9UFP1 575 aa11.12□□□□□ -0.63
PPFIA1-212ENST00000528853 PRIM1P49642 420 aaKnown RBP11.1□□□□□ -0.63
PPFIA1-212ENST00000528853 TJAP1Q5JTD0 557 aa11.1□□□□□ -0.63
PPFIA1-212ENST00000528853 P3H3Q8IVL6 736 aa11.1□□□□□ -0.63
PPFIA1-212ENST00000528853 NBPF26B4DH59 902 aa11.09□□□□□ -0.63
PPFIA1-212ENST00000528853 LAPTM4AQ15012 233 aa11.08□□□□□ -0.64
PPFIA1-212ENST00000528853 TATDN2Q93075 761 aa11.08□□□□□ -0.64
PPFIA1-212ENST00000528853 C3orf80F5H4A9 247 aa11.07□□□□□ -0.64
PPFIA1-212ENST00000528853 PNMA3Q9UL41 463 aa11.07□□□□□ -0.64
PPFIA1-212ENST00000528853 OSBPP22059 807 aa11.06□□□□□ -0.64
PPFIA1-212ENST00000528853 MTRQ99707 1265 aa11.05□□□□□ -0.64
PPFIA1-212ENST00000528853 IL21Q9HBE4 155 aa11.05□□□□□ -0.64
PPFIA1-212ENST00000528853 RBM27Q9P2N5 1060 aaKnown RBP11.05□□□□□ -0.64
PPFIA1-212ENST00000528853 HDGFP51858 240 aaKnown RBP11.03□□□□□ -0.64
PPFIA1-212ENST00000528853 KCNV2Q8TDN2 545 aa11.03□□□□□ -0.64
PPFIA1-212ENST00000528853 GFRA3O60609 400 aa11.02□□□□□ -0.65
PPFIA1-212ENST00000528853 NUDT18Q6ZVK8 323 aa11.02□□□□□ -0.65
PPFIA1-212ENST00000528853 CDHR5Q9HBB8 845 aa11.02□□□□□ -0.65
PPFIA1-212ENST00000528853 PLCB2Q00722 1185 aa11.01□□□□□ -0.65
PPFIA1-212ENST00000528853 PRKD2Q9BZL6 878 aa11.01□□□□□ -0.65
PPFIA1-212ENST00000528853 RNF40O75150 1001 aa10.99□□□□□ -0.65
PPFIA1-212ENST00000528853 PPP1R18Q6NYC8 613 aa10.99□□□□□ -0.65
PPFIA1-212ENST00000528853 LCE2BO14633 110 aa10.98□□□□□ -0.65
PPFIA1-212ENST00000528853 APLP1P51693 650 aa10.98□□□□□ -0.65
PPFIA1-212ENST00000528853 SLC4A3P48751 1232 aa10.97□□□□□ -0.65
PPFIA1-212ENST00000528853 ZNF516Q92618 1163 aa10.97□□□□□ -0.65
PPFIA1-212ENST00000528853 NECTIN2Q92692 538 aa10.97□□□□□ -0.65
PPFIA1-212ENST00000528853 TRAF7Q6Q0C0 670 aa10.96□□□□□ -0.65
PPFIA1-212ENST00000528853 TTC13Q8NBP0 860 aa10.96□□□□□ -0.65
PPFIA1-212ENST00000528853 V9GY48 417 aaPredicted RBP10.96□□□□□ -0.65
PPFIA1-212ENST00000528853 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.95□□□□□ -0.66
PPFIA1-212ENST00000528853 NRG2O14511 850 aaPredicted RBP10.94□□□□□ -0.66
PPFIA1-212ENST00000528853 MLLT3P42568 568 aaPredicted RBP10.93□□□□□ -0.66
PPFIA1-212ENST00000528853 PADI6Q6TGC4 694 aa10.93□□□□□ -0.66
PPFIA1-212ENST00000528853 SLF2Q8IX21 1173 aa10.93□□□□□ -0.66
PPFIA1-212ENST00000528853 NPDC1Q9NQX5 325 aaPredicted RBP10.93□□□□□ -0.66
PPFIA1-212ENST00000528853 SWT1Q5T5J6 900 aaKnown RBP10.92□□□□□ -0.66
PPFIA1-212ENST00000528853 NKX2-3Q8TAU0 364 aa10.91□□□□□ -0.66
PPFIA1-212ENST00000528853 NUTM2FA1L443 756 aa10.89□□□□□ -0.67
PPFIA1-212ENST00000528853 COPS2P61201 443 aa10.89□□□□□ -0.67
PPFIA1-212ENST00000528853 SMYD5Q6GMV2 418 aa10.89□□□□□ -0.67
PPFIA1-212ENST00000528853 GGCXP38435 758 aa10.88□□□□□ -0.67
PPFIA1-212ENST00000528853 HAP1P54257 671 aaPredicted RBP10.88□□□□□ -0.67
PPFIA1-212ENST00000528853 EYA1Q99502 592 aa10.87□□□□□ -0.67
PPFIA1-212ENST00000528853 FCHSD2O94868 740 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms