RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 TAF7LQ5H9L4 462 aa10.62□□□□□ -0.71
CTNND1-219ENST00000528621 CHMP3Q9Y3E7 222 aa10.62□□□□□ -0.71
CTNND1-219ENST00000528621 NUTM2DQ5VT03 806 aaPredicted RBP10.61□□□□□ -0.71
CTNND1-219ENST00000528621 CCDC34Q96HJ3 373 aa10.61□□□□□ -0.71
CTNND1-219ENST00000528621 MFAP1P55081 439 aaKnown RBP10.61□□□□□ -0.71
CTNND1-219ENST00000528621 NGDNQ8NEJ9 315 aaKnown RBP10.61□□□□□ -0.71
CTNND1-219ENST00000528621 JPH4Q96JJ6 628 aa10.61□□□□□ -0.71
CTNND1-219ENST00000528621 TRIM6-TRIM34B2RNG4 842 aa10.61□□□□□ -0.71
CTNND1-219ENST00000528621 DEKP35659 375 aaKnown RBP10.61□□□□□ -0.71
CTNND1-219ENST00000528621 AMPHP49418 695 aa10.6□□□□□ -0.71
CTNND1-219ENST00000528621 CHMP4CQ96CF2 233 aa10.6□□□□□ -0.71
CTNND1-219ENST00000528621 NGEFQ8N5V2 710 aa10.59□□□□□ -0.71
CTNND1-219ENST00000528621 CCDC9Q9Y3X0 531 aaKnown RBP10.59□□□□□ -0.71
CTNND1-219ENST00000528621 DHX57Q6P158 1386 aaKnown RBP10.59□□□□□ -0.71
CTNND1-219ENST00000528621 STAC3Q96MF2 364 aa10.59□□□□□ -0.71
CTNND1-219ENST00000528621 PTPRGP23470 1445 aa10.59□□□□□ -0.71
CTNND1-219ENST00000528621 EVC2Q86UK5 1308 aa10.59□□□□□ -0.71
CTNND1-219ENST00000528621 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.59□□□□□ -0.712e-8■□□□□ 11.3
CTNND1-219ENST00000528621 MYOM3Q5VTT5 1437 aa10.58□□□□□ -0.72
CTNND1-219ENST00000528621 VGFO15240 615 aaPredicted RBP10.58□□□□□ -0.72
CTNND1-219ENST00000528621 CGNL1Q0VF96 1302 aa10.58□□□□□ -0.72
CTNND1-219ENST00000528621 GAPVD1Q14C86 1478 aa10.58□□□□□ -0.72
CTNND1-219ENST00000528621 SLC4A10Q6U841 1118 aa10.58□□□□□ -0.72
CTNND1-219ENST00000528621 PHF14O94880 888 aa10.57□□□□□ -0.72
CTNND1-219ENST00000528621 E9PSI1 815 aa10.56□□□□□ -0.72
CTNND1-219ENST00000528621 PRDM2Q13029 1718 aa10.56□□□□□ -0.72
CTNND1-219ENST00000528621 FGD5Q6ZNL6 1462 aa10.56□□□□□ -0.72
CTNND1-219ENST00000528621 CENPQQ7L2Z9 268 aaPredicted RBP10.56□□□□□ -0.72
CTNND1-219ENST00000528621 IPO9Q96P70 1041 aaKnown RBP10.56□□□□□ -0.72
CTNND1-219ENST00000528621 TRAK1Q9UPV9 953 aa10.56□□□□□ -0.72
CTNND1-219ENST00000528621 KIF3AQ9Y496 699 aa10.56□□□□□ -0.72
CTNND1-219ENST00000528621 TSHZ2Q9NRE2 1034 aa10.56□□□□□ -0.72
CTNND1-219ENST00000528621 ST18O60284 1047 aa10.55□□□□□ -0.72
CTNND1-219ENST00000528621 KIF21BO75037 1637 aa10.55□□□□□ -0.72
CTNND1-219ENST00000528621 SLKQ9H2G2 1235 aaPredicted RBP10.55□□□□□ -0.72
CTNND1-219ENST00000528621 G3V3G9 751 aa10.55□□□□□ -0.72
CTNND1-219ENST00000528621 DCAF8Q5TAQ9 597 aa10.55□□□□□ -0.72
CTNND1-219ENST00000528621 PANK3Q9H999 370 aa10.55□□□□□ -0.72
CTNND1-219ENST00000528621 COG3Q96JB2 828 aa10.54□□□□□ -0.72
CTNND1-219ENST00000528621 GOLGA6L3A6NEY3 463 aa10.54□□□□□ -0.72
CTNND1-219ENST00000528621 FYCO1Q9BQS8 1478 aa10.54□□□□□ -0.72
CTNND1-219ENST00000528621 USP47Q96K76 1375 aa10.54□□□□□ -0.72
CTNND1-219ENST00000528621 MIA2Q96PC5 1412 aa10.54□□□□□ -0.72
CTNND1-219ENST00000528621 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.53□□□□□ -0.72
CTNND1-219ENST00000528621 LTV1Q96GA3 475 aaPredicted RBP10.53□□□□□ -0.72
CTNND1-219ENST00000528621 C1orf141Q5JVX7 400 aa10.53□□□□□ -0.72
CTNND1-219ENST00000528621 GZF1Q9H116 711 aaPredicted RBP10.53□□□□□ -0.72
CTNND1-219ENST00000528621 ROCK1Q13464 1354 aa10.53□□□□□ -0.72
CTNND1-219ENST00000528621 DDX11L8A8MPP1 907 aa10.53□□□□□ -0.72
CTNND1-219ENST00000528621 ERICH3Q5RHP9 1530 aa10.53□□□□□ -0.72
CTNND1-219ENST00000528621 ZBED9Q6R2W3 1325 aa10.53□□□□□ -0.72
CTNND1-219ENST00000528621 USP35Q9P2H5 1018 aa10.52□□□□□ -0.72
CTNND1-219ENST00000528621 KIF16BQ96L93 1317 aa10.52□□□□□ -0.72
CTNND1-219ENST00000528621 CLUAP1Q96AJ1 413 aa10.52□□□□□ -0.73
CTNND1-219ENST00000528621 NOC3LQ8WTT2 800 aaKnown RBP10.52□□□□□ -0.73
CTNND1-219ENST00000528621 LRRFIP1Q32MZ4 808 aaKnown RBP10.51□□□□□ -0.73
CTNND1-219ENST00000528621 FGD6Q6ZV73 1430 aa10.51□□□□□ -0.73
CTNND1-219ENST00000528621 ZKSCAN2Q63HK3 967 aa10.51□□□□□ -0.73
CTNND1-219ENST00000528621 ST20-MTHFSA0A0A6YYL1 179 aa10.51□□□□□ -0.73
CTNND1-219ENST00000528621 RRP7AQ9Y3A4 280 aaKnown RBP10.51□□□□□ -0.73
CTNND1-219ENST00000528621 CASKIN1Q8WXD9 1431 aa10.5□□□□□ -0.73
CTNND1-219ENST00000528621 NOL8Q76FK4 1167 aaKnown RBP10.5□□□□□ -0.73
CTNND1-219ENST00000528621 RUSC2Q8N2Y8 1516 aa10.5□□□□□ -0.73
CTNND1-219ENST00000528621 AAMPQ13685 434 aa10.5□□□□□ -0.73
CTNND1-219ENST00000528621 SKOR2Q2VWA4 1001 aaPredicted RBP10.5□□□□□ -0.73
CTNND1-219ENST00000528621 RASSF8Q8NHQ8 419 aa10.5□□□□□ -0.73
CTNND1-219ENST00000528621 FOXD4L1Q9NU39 408 aa10.5□□□□□ -0.73
CTNND1-219ENST00000528621 EFCAB5A4FU69 1503 aa10.49□□□□□ -0.73
CTNND1-219ENST00000528621 FAM161AQ3B820 660 aa10.49□□□□□ -0.73
CTNND1-219ENST00000528621 LRRC9Q6ZRR7 1453 aa10.49□□□□□ -0.73
CTNND1-219ENST00000528621 NCAPD3P42695 1498 aa10.48□□□□□ -0.73
CTNND1-219ENST00000528621 NUTM2FA1L443 756 aa10.48□□□□□ -0.73
CTNND1-219ENST00000528621 RRP1P56182 461 aaKnown RBP10.48□□□□□ -0.73
CTNND1-219ENST00000528621 ATP6V1DQ9Y5K8 247 aa10.48□□□□□ -0.73
CTNND1-219ENST00000528621 IGF1RP08069 1367 aa10.48□□□□□ -0.73
CTNND1-219ENST00000528621 FRAT2O75474 233 aaPredicted RBP10.47□□□□□ -0.73
CTNND1-219ENST00000528621 PRKRIP1Q9H875 184 aaPredicted RBP10.47□□□□□ -0.73
CTNND1-219ENST00000528621 TOMM22Q9NS69 142 aa10.47□□□□□ -0.73
CTNND1-219ENST00000528621 EVA1CP58658 441 aa10.47□□□□□ -0.73
CTNND1-219ENST00000528621 RILPL2Q969X0 211 aa10.47□□□□□ -0.73
CTNND1-219ENST00000528621 H3BQV1 296 aa10.46□□□□□ -0.73
CTNND1-219ENST00000528621 IFFO2Q5TF58 517 aa10.46□□□□□ -0.73
CTNND1-219ENST00000528621 DDX19BQ9UMR2 479 aa10.46□□□□□ -0.73
CTNND1-219ENST00000528621 ANKRD45Q5TZF3 282 aa10.46□□□□□ -0.73
CTNND1-219ENST00000528621 GTF2E1P29083 439 aaPredicted RBP10.46□□□□□ -0.73
CTNND1-219ENST00000528621 NCBP3Q53F19 620 aaKnown RBP10.46□□□□□ -0.73
CTNND1-219ENST00000528621 RUFY2Q8WXA3 655 aa10.46□□□□□ -0.73
CTNND1-219ENST00000528621 RRBP1Q9P2E9 1410 aaKnown RBP10.46□□□□□ -0.74
CTNND1-219ENST00000528621 EHBP1L1Q8N3D4 1523 aa10.46□□□□□ -0.74
CTNND1-219ENST00000528621 TTC5Q8N0Z6 440 aa10.46□□□□□ -0.74
CTNND1-219ENST00000528621 DIAPH1O60610 1272 aaKnown RBP10.45□□□□□ -0.74
CTNND1-219ENST00000528621 API5Q9BZZ5 524 aaKnown RBP10.45□□□□□ -0.74
CTNND1-219ENST00000528621 MINK1Q8N4C8 1332 aaPredicted RBP10.45□□□□□ -0.74
CTNND1-219ENST00000528621 GRIN2BQ13224 1484 aa10.45□□□□□ -0.74
CTNND1-219ENST00000528621 MARCH6O60337 910 aa10.45□□□□□ -0.74
CTNND1-219ENST00000528621 CRBNQ96SW2 442 aa10.45□□□□□ -0.74
CTNND1-219ENST00000528621 CNTLNQ9NXG0 1405 aa10.45□□□□□ -0.74
CTNND1-219ENST00000528621 PLEKHH2Q8IVE3 1493 aa10.44□□□□□ -0.74
CTNND1-219ENST00000528621 NEXNQ0ZGT2 675 aa10.44□□□□□ -0.74
CTNND1-219ENST00000528621 SF3A1Q15459 793 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms