RNA–Protein interactions for RNA: ENST00000528608.5

COMMD9-205, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 988 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-205ENST00000528608 PHF14O94880 888 aa15.71■□□□□ 0.11
COMMD9-205ENST00000528608 TYW1BQ6NUM6 668 aa15.71■□□□□ 0.11
COMMD9-205ENST00000528608 FBXW7Q969H0 707 aa15.7■□□□□ 0.1
COMMD9-205ENST00000528608 TSHZ2Q9NRE2 1034 aa15.7■□□□□ 0.1
COMMD9-205ENST00000528608 HRO43593 1189 aa15.69■□□□□ 0.1
COMMD9-205ENST00000528608 STAC3Q96MF2 364 aa15.69■□□□□ 0.1
COMMD9-205ENST00000528608 EIF4G1Q04637 1599 aaKnown RBP15.67■□□□□ 0.1
COMMD9-205ENST00000528608 VPS9D1Q9Y2B5 631 aa15.67■□□□□ 0.1
COMMD9-205ENST00000528608 PDIA6Q15084 440 aa15.66■□□□□ 0.1
COMMD9-205ENST00000528608 SPDYE16A6NNV3 312 aaPredicted RBP15.65■□□□□ 0.1
COMMD9-205ENST00000528608 DDX12PQ92771 950 aa15.65■□□□□ 0.1
COMMD9-205ENST00000528608 EPAS1Q99814 870 aa15.65■□□□□ 0.1
COMMD9-205ENST00000528608 SLC4A5Q9BY07 1137 aa15.65■□□□□ 0.1
COMMD9-205ENST00000528608 ZBED2Q9BTP6 218 aa15.64■□□□□ 0.09
COMMD9-205ENST00000528608 PPP1R3GB7ZBB8 358 aa15.62■□□□□ 0.09
COMMD9-205ENST00000528608 CC2D2AQ9P2K1 1620 aa15.61■□□□□ 0.09
COMMD9-205ENST00000528608 ARIH1Q9Y4X5 557 aaPredicted RBP15.6■□□□□ 0.09
COMMD9-205ENST00000528608 NBR1Q14596 966 aa15.58■□□□□ 0.08
COMMD9-205ENST00000528608 RBM33Q96EV2 1170 aaKnown RBP15.58■□□□□ 0.08
COMMD9-205ENST00000528608 COL9A1P20849 921 aa15.56■□□□□ 0.08
COMMD9-205ENST00000528608 KCTD12Q96CX2 325 aaKnown RBP15.55■□□□□ 0.08
COMMD9-205ENST00000528608 CECR2Q9BXF3 1484 aa15.54■□□□□ 0.08
COMMD9-205ENST00000528608 C6orf132Q5T0Z8 1188 aa15.54■□□□□ 0.08
COMMD9-205ENST00000528608 PLCB2Q00722 1185 aa15.52■□□□□ 0.08
COMMD9-205ENST00000528608 MRPL50Q8N5N7 158 aaKnown RBP15.52■□□□□ 0.08
COMMD9-205ENST00000528608 NBPF3Q9H094 633 aa15.52■□□□□ 0.08
COMMD9-205ENST00000528608 HCSTQ9UBK5 93 aa15.52■□□□□ 0.08
COMMD9-205ENST00000528608 BHMG1C9JSJ3 638 aaPredicted RBP15.51■□□□□ 0.07
COMMD9-205ENST00000528608 MAP3K7O43318 606 aa15.51■□□□□ 0.07
COMMD9-205ENST00000528608 EN1Q05925 392 aaPredicted RBP15.51■□□□□ 0.07
COMMD9-205ENST00000528608 PROX2Q3B8N5 592 aa15.51■□□□□ 0.07
COMMD9-205ENST00000528608 GRXCR2A6NFK2 248 aa15.5■□□□□ 0.07
COMMD9-205ENST00000528608 GOLGA8CPA6NN73 597 aa15.5■□□□□ 0.07
COMMD9-205ENST00000528608 RABGEF1Q9UJ41 708 aa15.47■□□□□ 0.07
COMMD9-205ENST00000528608 TSR1Q2NL82 804 aaKnown RBP15.45■□□□□ 0.06
COMMD9-205ENST00000528608 KCNV2Q8TDN2 545 aa15.44■□□□□ 0.06
COMMD9-205ENST00000528608 ARHGEF1Q92888 912 aaKnown RBP15.42■□□□□ 0.06
COMMD9-205ENST00000528608 SMARCA4P51532 1647 aa15.42■□□□□ 0.06
COMMD9-205ENST00000528608 WNT2BQ93097 391 aa15.41■□□□□ 0.06
COMMD9-205ENST00000528608 KIAA1468Q9P260 1216 aa15.4■□□□□ 0.06
COMMD9-205ENST00000528608 TRIM6-TRIM34B2RNG4 842 aa15.39■□□□□ 0.05
COMMD9-205ENST00000528608 PTPN5P54829 565 aa15.39■□□□□ 0.05
COMMD9-205ENST00000528608 BAZ1AQ9NRL2 1556 aaPredicted RBP15.38■□□□□ 0.05
COMMD9-205ENST00000528608 ONECUT3O60422 494 aaPredicted RBP15.38■□□□□ 0.05
COMMD9-205ENST00000528608 PRIM1P49642 420 aaKnown RBP15.38■□□□□ 0.05
COMMD9-205ENST00000528608 P3H3Q8IVL6 736 aa15.38■□□□□ 0.05
COMMD9-205ENST00000528608 THSD4Q6ZMP0 1018 aa15.37■□□□□ 0.05
COMMD9-205ENST00000528608 MROH2BQ7Z745 1585 aa15.36■□□□□ 0.05
COMMD9-205ENST00000528608 OSBPP22059 807 aa15.36■□□□□ 0.05
COMMD9-205ENST00000528608 ATAD2BQ9ULI0 1458 aa15.34■□□□□ 0.05
COMMD9-205ENST00000528608 HAP1P54257 671 aaPredicted RBP15.34■□□□□ 0.05
COMMD9-205ENST00000528608 LAPTM4BQ86VI4 370 aa15.34■□□□□ 0.05
COMMD9-205ENST00000528608 ANKK1Q8NFD2 765 aa15.34■□□□□ 0.05
COMMD9-205ENST00000528608 CERKQ8TCT0 537 aa15.33■□□□□ 0.04
COMMD9-205ENST00000528608 SEPT9Q9UHD8 586 aaPredicted RBP15.33■□□□□ 0.04
COMMD9-205ENST00000528608 CDHR5Q9HBB8 845 aa15.31■□□□□ 0.04
COMMD9-205ENST00000528608 PLA2G2EQ9NZK7 142 aa15.31■□□□□ 0.04
COMMD9-205ENST00000528608 NCAPD3P42695 1498 aa15.31■□□□□ 0.04
COMMD9-205ENST00000528608 PACS2Q86VP3 889 aa15.3■□□□□ 0.04
COMMD9-205ENST00000528608 TSKSQ9UJT2 592 aa15.3■□□□□ 0.04
COMMD9-205ENST00000528608 CDCA7LQ96GN5 454 aa15.29■□□□□ 0.04
COMMD9-205ENST00000528608 MLLT3P42568 568 aaPredicted RBP15.28■□□□□ 0.04
COMMD9-205ENST00000528608 PRSS12P56730 875 aa15.28■□□□□ 0.04
COMMD9-205ENST00000528608 FAM98CQ17RN3 349 aaKnown RBP15.27■□□□□ 0.04
COMMD9-205ENST00000528608 ZFRQ96KR1 1074 aaKnown RBP15.27■□□□□ 0.04
COMMD9-205ENST00000528608 SMARCA2P51531 1590 aa15.27■□□□□ 0.03
COMMD9-205ENST00000528608 PEG3Q9GZU2 1588 aa15.25■□□□□ 0.03
COMMD9-205ENST00000528608 BCAMP50895 628 aa15.24■□□□□ 0.03
COMMD9-205ENST00000528608 SOWAHBA6NEL2 793 aa15.21■□□□□ 0.03
COMMD9-205ENST00000528608 FAM198AQ9UFP1 575 aa15.21■□□□□ 0.03
COMMD9-205ENST00000528608 HMGXB3Q12766 1538 aa15.21■□□□□ 0.03
COMMD9-205ENST00000528608 WIZO95785 1651 aa15.2■□□□□ 0.02
COMMD9-205ENST00000528608 NBPF26B4DH59 902 aa15.2■□□□□ 0.02
COMMD9-205ENST00000528608 RSF1Q96T23 1441 aaPredicted RBP15.19■□□□□ 0.02
COMMD9-205ENST00000528608 RBM27Q9P2N5 1060 aaKnown RBP15.19■□□□□ 0.02
COMMD9-205ENST00000528608 BAZ1BQ9UIG0 1483 aaKnown RBP15.19■□□□□ 0.02
COMMD9-205ENST00000528608 SMAPO00193 183 aa15.18■□□□□ 0.02
COMMD9-205ENST00000528608 PNMA3Q9UL41 463 aa15.18■□□□□ 0.02
COMMD9-205ENST00000528608 LRCH3Q96II8 777 aa15.17■□□□□ 0.02
COMMD9-205ENST00000528608 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.17■□□□□ 0.02
COMMD9-205ENST00000528608 SEMA3EO15041 775 aa15.16■□□□□ 0.02
COMMD9-205ENST00000528608 TATDN2Q93075 761 aa15.16■□□□□ 0.02
COMMD9-205ENST00000528608 PADI6Q6TGC4 694 aa15.15■□□□□ 0.02
COMMD9-205ENST00000528608 NPDC1Q9NQX5 325 aaPredicted RBP15.15■□□□□ 0.02
COMMD9-205ENST00000528608 C3orf80F5H4A9 247 aa15.12■□□□□ 0.01
COMMD9-205ENST00000528608 NUDT18Q6ZVK8 323 aa15.12■□□□□ 0.01
COMMD9-205ENST00000528608 WBP1LQ9NX94 342 aa15.11■□□□□ 0.01
COMMD9-205ENST00000528608 HPS5Q9UPZ3 1129 aa15.11■□□□□ 0.01
COMMD9-205ENST00000528608 NUTM2FA1L443 756 aa15.1■□□□□ 0.01
COMMD9-205ENST00000528608 NYAP1Q6ZVC0 841 aa15.09■□□□□ 0.01
COMMD9-205ENST00000528608 SAMD7Q7Z3H4 446 aa15.09■□□□□ 0.01
COMMD9-205ENST00000528608 TSR3Q9UJK0 312 aaKnown RBP15.09■□□□□ 0.01
COMMD9-205ENST00000528608 KDM2AQ9Y2K7 1162 aa15.09■□□□□ 0.01
COMMD9-205ENST00000528608 TTC13Q8NBP0 860 aa15.08■□□□□ 0
COMMD9-205ENST00000528608 PTGDRQ13258 359 aa15.06■□□□□ 0
COMMD9-205ENST00000528608 HDGFP51858 240 aaKnown RBP15.04■□□□□ -0
COMMD9-205ENST00000528608 TESPA1A2RU30 521 aaPredicted RBP15.03■□□□□ -0
COMMD9-205ENST00000528608 PPP4CP60510 307 aa15.03■□□□□ -0
COMMD9-205ENST00000528608 RNF40O75150 1001 aa15.02■□□□□ -0
COMMD9-205ENST00000528608 SMYD5Q6GMV2 418 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms