RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	PNISR	Q8TF01	805 aa	Known RBP	31.76	■■■□□ 2.67
GSDMD-208	ENST00000528475	NUDC	Q9Y266	331 aa		31.76	■■■□□ 2.67
GSDMD-208	ENST00000528475	RNF123	Q5XPI4	1314 aa		31.75	■■■□□ 2.67
GSDMD-208	ENST00000528475	TRPM1	Q7Z4N2	1603 aa		31.74	■■■□□ 2.67
GSDMD-208	ENST00000528475	DCAF11	Q8TEB1	546 aa		31.74	■■■□□ 2.67
GSDMD-208	ENST00000528475	CLASP1	Q7Z460	1538 aa		31.73	■■■□□ 2.67
GSDMD-208	ENST00000528475	ST20-MTHFS	A0A0A6YYL1	179 aa		31.72	■■■□□ 2.67
GSDMD-208	ENST00000528475	PRAG1	Q86YV5	1406 aa		31.71	■■■□□ 2.67
GSDMD-208	ENST00000528475	SYCP2	Q9BX26	1530 aa		31.7	■■■□□ 2.67
GSDMD-208	ENST00000528475	BRD4	O60885	1362 aa	Predicted RBP	31.7	■■■□□ 2.67
GSDMD-208	ENST00000528475	PLXNC1	O60486	1568 aa		31.7	■■■□□ 2.67
GSDMD-208	ENST00000528475	KDM2A	Q9Y2K7	1162 aa		31.7	■■■□□ 2.67
GSDMD-208	ENST00000528475	LRPPRC	P42704	1394 aa	Known RBP	31.7	■■■□□ 2.66
GSDMD-208	ENST00000528475	CCDC144A	A2RUR9	1427 aa		31.69	■■■□□ 2.66
GSDMD-208	ENST00000528475	RALBP1	Q15311	655 aa		31.69	■■■□□ 2.66
GSDMD-208	ENST00000528475	ERCC6L2	Q5T890	1561 aa		31.68	■■■□□ 2.66
GSDMD-208	ENST00000528475	TTC37	Q6PGP7	1564 aa		31.68	■■■□□ 2.66
GSDMD-208	ENST00000528475	LAMC1	P11047	1609 aa		31.68	■■■□□ 2.66
GSDMD-208	ENST00000528475	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	31.67	■■■□□ 2.66
GSDMD-208	ENST00000528475	TMC1	Q8TDI8	760 aa		31.67	■■■□□ 2.66
GSDMD-208	ENST00000528475	PLEKHH2	Q8IVE3	1493 aa		31.67	■■■□□ 2.66
GSDMD-208	ENST00000528475	MYBBP1A	Q9BQG0	1328 aa	Known RBP	31.66	■■■□□ 2.66
GSDMD-208	ENST00000528475	ARHGAP5	Q13017	1502 aa		31.66	■■■□□ 2.66
GSDMD-208	ENST00000528475	IQGAP3	Q86VI3	1631 aa		31.66	■■■□□ 2.66
GSDMD-208	ENST00000528475	GPRASP1	Q5JY77	1395 aa		31.65	■■■□□ 2.66
GSDMD-208	ENST00000528475	B4GALNT3	Q6L9W6	998 aa		31.64	■■■□□ 2.66
GSDMD-208	ENST00000528475	MSH5	O43196	834 aa		31.64	■■■□□ 2.66
GSDMD-208	ENST00000528475	PLA2R1	Q13018	1463 aa		31.63	■■■□□ 2.65
GSDMD-208	ENST00000528475	MYO5C	Q9NQX4	1742 aa		31.62	■■■□□ 2.65
GSDMD-208	ENST00000528475	ABCC2	Q92887	1545 aa		31.6	■■■□□ 2.65
GSDMD-208	ENST00000528475	ATP10A	O60312	1499 aa		31.58	■■■□□ 2.65
GSDMD-208	ENST00000528475	A2M	P01023	1474 aa		31.58	■■■□□ 2.65
GSDMD-208	ENST00000528475	CNGB1	Q14028	1251 aa	Predicted RBP	31.58	■■■□□ 2.65
GSDMD-208	ENST00000528475	MAGI2	Q86UL8	1455 aa		31.58	■■■□□ 2.65
GSDMD-208	ENST00000528475	PRDM15	P57071	1507 aa	Predicted RBP	31.56	■■■□□ 2.64
GSDMD-208	ENST00000528475	DUOX2	Q9NRD8	1548 aa		31.56	■■■□□ 2.64
GSDMD-208	ENST00000528475	EIF2AK4	Q9P2K8	1649 aa	Known RBP	31.56	■■■□□ 2.64
GSDMD-208	ENST00000528475	PARD3	Q8TEW0	1356 aa		31.54	■■■□□ 2.64
GSDMD-208	ENST00000528475	ERBIN	Q96RT1	1412 aa		31.52	■■■□□ 2.64
GSDMD-208	ENST00000528475	COL17A1	Q9UMD9	1497 aa	Predicted RBP	31.52	■■■□□ 2.64
GSDMD-208	ENST00000528475	WASHC2C	Q9Y4E1	1318 aa		31.48	■■■□□ 2.63
GSDMD-208	ENST00000528475	NLRP13	Q86W25	1043 aa		31.48	■■■□□ 2.63
GSDMD-208	ENST00000528475	PER1	O15534	1290 aa	Predicted RBP	31.45	■■■□□ 2.62
GSDMD-208	ENST00000528475	NBPF1	Q3BBV0	1214 aa		31.45	■■■□□ 2.62
GSDMD-208	ENST00000528475	PLCH2	O75038	1416 aa		31.44	■■■□□ 2.62
GSDMD-208	ENST00000528475	INSR	P06213	1382 aa		31.44	■■■□□ 2.62
GSDMD-208	ENST00000528475	ZMYM4	Q5VZL5	1548 aa		31.42	■■■□□ 2.62
GSDMD-208	ENST00000528475	RGL3	Q3MIN7	710 aa		31.42	■■■□□ 2.62
GSDMD-208	ENST00000528475	UHRF1BP1L	A0JNW5	1464 aa		31.42	■■■□□ 2.62
GSDMD-208	ENST00000528475	TESK2	Q96S53	571 aa		31.41	■■■□□ 2.62
GSDMD-208	ENST00000528475	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	31.41	■■■□□ 2.62	3e-6	■■■□□ 14.8
GSDMD-208	ENST00000528475	RNF17	Q9BXT8	1623 aa	Known RBP	31.41	■■■□□ 2.62
GSDMD-208	ENST00000528475	CCDC136	Q96JN2	1154 aa		31.39	■■■□□ 2.62
GSDMD-208	ENST00000528475	ABCC1	P33527	1531 aa		31.38	■■■□□ 2.61
GSDMD-208	ENST00000528475	PDE3B	Q13370	1112 aa		31.37	■■■□□ 2.61
GSDMD-208	ENST00000528475	DISP3	Q9P2K9	1392 aa		31.36	■■■□□ 2.61
GSDMD-208	ENST00000528475	ZCCHC11	Q5TAX3	1644 aa	Known RBP	31.36	■■■□□ 2.61
GSDMD-208	ENST00000528475	EFCAB2	Q5VUJ9	269 aa		31.33	■■■□□ 2.61
GSDMD-208	ENST00000528475	ERICH6	Q7L0X2	663 aa		31.33	■■■□□ 2.61
GSDMD-208	ENST00000528475	TMF1	P82094	1093 aa		31.3	■■■□□ 2.6
GSDMD-208	ENST00000528475	RRP1	P56182	461 aa	Known RBP	31.29	■■■□□ 2.6
GSDMD-208	ENST00000528475	OSCAR	Q8IYS5	282 aa		31.28	■■■□□ 2.6
GSDMD-208	ENST00000528475	ARAP3	Q8WWN8	1544 aa		31.28	■■■□□ 2.6
GSDMD-208	ENST00000528475	BLM	P54132	1417 aa	Predicted RBP	31.28	■■■□□ 2.6
GSDMD-208	ENST00000528475	RTEL1-TNFRSF6B	F6WH68	1400 aa		31.27	■■■□□ 2.6
GSDMD-208	ENST00000528475	TRAPPC8	Q9Y2L5	1435 aa		31.25	■■■□□ 2.59
GSDMD-208	ENST00000528475	MADD	Q8WXG6	1647 aa		31.25	■■■□□ 2.59
GSDMD-208	ENST00000528475	SENP3-EIF4A1	A0A087X0R7	540 aa		31.25	■■■□□ 2.59
GSDMD-208	ENST00000528475	RCAN3	Q9UKA8	241 aa		31.25	■■■□□ 2.59
GSDMD-208	ENST00000528475	TRPM2	O94759	1503 aa		31.23	■■■□□ 2.59
GSDMD-208	ENST00000528475	IQGAP1	P46940	1657 aa		31.23	■■■□□ 2.59
GSDMD-208	ENST00000528475	PANK3	Q9H999	370 aa		31.23	■■■□□ 2.59
GSDMD-208	ENST00000528475	STAC3	Q96MF2	364 aa		31.22	■■■□□ 2.59
GSDMD-208	ENST00000528475	CEP152	O94986	1710 aa		31.2	■■■□□ 2.58
GSDMD-208	ENST00000528475	SPHKAP	Q2M3C7	1700 aa		31.2	■■■□□ 2.58
GSDMD-208	ENST00000528475	DEPDC5	O75140	1603 aa		31.19	■■■□□ 2.58
GSDMD-208	ENST00000528475	PTPRT	O14522	1441 aa		31.19	■■■□□ 2.58
GSDMD-208	ENST00000528475	ZFYVE16	Q7Z3T8	1539 aa		31.18	■■■□□ 2.58
GSDMD-208	ENST00000528475	CC2D1B	Q5T0F9	858 aa	Known RBP	31.17	■■■□□ 2.58
GSDMD-208	ENST00000528475	SCAPER	Q9BY12	1400 aa		31.16	■■■□□ 2.58
GSDMD-208	ENST00000528475	WDR7	Q9Y4E6	1490 aa		31.16	■■■□□ 2.58
GSDMD-208	ENST00000528475	SPAG9	O60271	1321 aa	Known RBP	31.14	■■■□□ 2.58
GSDMD-208	ENST00000528475	TET3	O43151	1660 aa		31.12	■■■□□ 2.57
GSDMD-208	ENST00000528475	NEURL4	Q96JN8	1562 aa		31.11	■■■□□ 2.57
GSDMD-208	ENST00000528475	EXOC6	Q8TAG9	804 aa		31.1	■■■□□ 2.57
GSDMD-208	ENST00000528475	SCAF11	Q99590	1463 aa	Known RBP	31.1	■■■□□ 2.57
GSDMD-208	ENST00000528475	SYNM	O15061	1565 aa		31.1	■■■□□ 2.57
GSDMD-208	ENST00000528475	MYT1L	Q9UL68	1186 aa		31.1	■■■□□ 2.57
GSDMD-208	ENST00000528475	CLTCL1	P53675	1640 aa		31.1	■■■□□ 2.57
GSDMD-208	ENST00000528475	VWDE	Q8N2E2	1590 aa		31.09	■■■□□ 2.57
GSDMD-208	ENST00000528475	NOP58	Q9Y2X3	529 aa	Known RBP	31.09	■■■□□ 2.57
GSDMD-208	ENST00000528475	KIAA1210	Q9ULL0	1709 aa		31.07	■■■□□ 2.56
GSDMD-208	ENST00000528475	CDCA8	Q53HL2	280 aa		31.07	■■■□□ 2.56
GSDMD-208	ENST00000528475	SALL2	Q9Y467	1007 aa	Predicted RBP	31.07	■■■□□ 2.56
GSDMD-208	ENST00000528475	CDCA7L	Q96GN5	454 aa		31.05	■■■□□ 2.56
GSDMD-208	ENST00000528475	INO80	Q9ULG1	1556 aa	Predicted RBP	31.05	■■■□□ 2.56
GSDMD-208	ENST00000528475	ABCA9	Q8IUA7	1624 aa		31.03	■■■□□ 2.56
GSDMD-208	ENST00000528475	ANP32A	P39687	249 aa	Known RBP	31.02	■■■□□ 2.56
GSDMD-208	ENST00000528475	TCERG1	O14776	1098 aa	Known RBP	31.02	■■■□□ 2.56
GSDMD-208	ENST00000528475	ATP7A	Q04656	1500 aa		31.01	■■■□□ 2.56

Retrieved 100 of 20,778 RNA–protein pairs in 76 ms