RNA–Protein interactions for RNA: ENST00000527599.1

CTNND1-217, Transcript of catenin delta 1, humanhuman

TSL 2

Gene CTNND1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-217ENST00000527599 NBR1Q14596 966 aa19.54■□□□□ 0.72
CTNND1-217ENST00000527599 MMRN1Q13201 1228 aa19.53■□□□□ 0.72
CTNND1-217ENST00000527599 RBM33Q96EV2 1170 aaKnown RBP19.53■□□□□ 0.72
CTNND1-217ENST00000527599 COL9A1P20849 921 aa19.5■□□□□ 0.71
CTNND1-217ENST00000527599 MLLT3P42568 568 aaPredicted RBP19.5■□□□□ 0.71
CTNND1-217ENST00000527599 ADGRD1Q6QNK2 874 aa19.5■□□□□ 0.71
CTNND1-217ENST00000527599 OSBPP22059 807 aa19.49■□□□□ 0.71
CTNND1-217ENST00000527599 EN1Q05925 392 aaPredicted RBP19.48■□□□□ 0.71
CTNND1-217ENST00000527599 C6orf132Q5T0Z8 1188 aa19.48■□□□□ 0.71
CTNND1-217ENST00000527599 TK2O00142 265 aa19.47■□□□□ 0.71
CTNND1-217ENST00000527599 KCNH8Q96L42 1107 aa19.47■□□□□ 0.71
CTNND1-217ENST00000527599 ZBED2Q9BTP6 218 aa19.45■□□□□ 0.7
CTNND1-217ENST00000527599 TSR1Q2NL82 804 aaKnown RBP19.44■□□□□ 0.7
CTNND1-217ENST00000527599 VPS9D1Q9Y2B5 631 aa19.44■□□□□ 0.7
CTNND1-217ENST00000527599 SEMA3EO15041 775 aa19.43■□□□□ 0.7
CTNND1-217ENST00000527599 HRO43593 1189 aa19.43■□□□□ 0.7
CTNND1-217ENST00000527599 PPP1R3GB7ZBB8 358 aa19.42■□□□□ 0.7
CTNND1-217ENST00000527599 SLC4A5Q9BY07 1137 aa19.42■□□□□ 0.7
CTNND1-217ENST00000527599 MAP3K7O43318 606 aa19.4■□□□□ 0.7
CTNND1-217ENST00000527599 MYT1LQ9UL68 1186 aa19.37■□□□□ 0.69
CTNND1-217ENST00000527599 PROX2Q3B8N5 592 aa19.36■□□□□ 0.69
CTNND1-217ENST00000527599 CDHR5Q9HBB8 845 aa19.33■□□□□ 0.68
CTNND1-217ENST00000527599 BHMG1C9JSJ3 638 aaPredicted RBP19.31■□□□□ 0.68
CTNND1-217ENST00000527599 TESPA1A2RU30 521 aaPredicted RBP19.29■□□□□ 0.68
CTNND1-217ENST00000527599 RNF166Q96A37 237 aaPredicted RBP19.27■□□□□ 0.68
CTNND1-217ENST00000527599 NPDC1Q9NQX5 325 aaPredicted RBP19.24■□□□□ 0.67
CTNND1-217ENST00000527599 TRIM6-TRIM34B2RNG4 842 aa19.21■□□□□ 0.67
CTNND1-217ENST00000527599 RABGEF1Q9UJ41 708 aa19.21■□□□□ 0.67
CTNND1-217ENST00000527599 KIAA1468Q9P260 1216 aa19.2■□□□□ 0.66
CTNND1-217ENST00000527599 TSKSQ9UJT2 592 aa19.2■□□□□ 0.66
CTNND1-217ENST00000527599 FAM198AQ9UFP1 575 aa19.19■□□□□ 0.66
CTNND1-217ENST00000527599 ONECUT3O60422 494 aaPredicted RBP19.17■□□□□ 0.66
CTNND1-217ENST00000527599 PRSS12P56730 875 aa19.16■□□□□ 0.66
CTNND1-217ENST00000527599 CDCA7LQ96GN5 454 aa19.16■□□□□ 0.66
CTNND1-217ENST00000527599 CERKQ8TCT0 537 aa19.14■□□□□ 0.65
CTNND1-217ENST00000527599 STAC3Q96MF2 364 aa19.14■□□□□ 0.65
CTNND1-217ENST00000527599 RBM26Q5T8P6 1007 aaKnown RBP19.13■□□□□ 0.65
CTNND1-217ENST00000527599 C3orf80F5H4A9 247 aa19.12■□□□□ 0.65
CTNND1-217ENST00000527599 MRPL50Q8N5N7 158 aaKnown RBP19.12■□□□□ 0.65
CTNND1-217ENST00000527599 NBPF3Q9H094 633 aa19.11■□□□□ 0.65
CTNND1-217ENST00000527599 PTGDRQ13258 359 aa19.09■□□□□ 0.65
CTNND1-217ENST00000527599 NUTM2FA1L443 756 aa19.08■□□□□ 0.64
CTNND1-217ENST00000527599 KCTD12Q96CX2 325 aaKnown RBP19.08■□□□□ 0.64
CTNND1-217ENST00000527599 SEPT9Q9UHD8 586 aaPredicted RBP19.08■□□□□ 0.64
CTNND1-217ENST00000527599 TTC13Q8NBP0 860 aa19.07■□□□□ 0.64
CTNND1-217ENST00000527599 SMYD5Q6GMV2 418 aa19.06■□□□□ 0.64
CTNND1-217ENST00000527599 PADI6Q6TGC4 694 aa19.05■□□□□ 0.64
CTNND1-217ENST00000527599 PACS2Q86VP3 889 aa19.05■□□□□ 0.64
CTNND1-217ENST00000527599 RBM27Q9P2N5 1060 aaKnown RBP19.04■□□□□ 0.64
CTNND1-217ENST00000527599 SMAPO00193 183 aa19.01■□□□□ 0.63
CTNND1-217ENST00000527599 LAPTM4BQ86VI4 370 aa19.01■□□□□ 0.63
CTNND1-217ENST00000527599 WNT2BQ93097 391 aa18.99■□□□□ 0.63
CTNND1-217ENST00000527599 GOLGA8CPA6NN73 597 aa18.98■□□□□ 0.63
CTNND1-217ENST00000527599 TATDN2Q93075 761 aa18.98■□□□□ 0.63
CTNND1-217ENST00000527599 GPR37O15354 613 aa18.97■□□□□ 0.63
CTNND1-217ENST00000527599 ZFRQ96KR1 1074 aaKnown RBP18.97■□□□□ 0.63
CTNND1-217ENST00000527599 FAM98CQ17RN3 349 aaKnown RBP18.96■□□□□ 0.63
CTNND1-217ENST00000527599 FCHSD2O94868 740 aa18.95■□□□□ 0.62
CTNND1-217ENST00000527599 THSD4Q6ZMP0 1018 aa18.95■□□□□ 0.62
CTNND1-217ENST00000527599 SLC24A1O60721 1099 aa18.94■□□□□ 0.62
CTNND1-217ENST00000527599 NUDT18Q6ZVK8 323 aa18.94■□□□□ 0.62
CTNND1-217ENST00000527599 PNMA3Q9UL41 463 aa18.94■□□□□ 0.62
CTNND1-217ENST00000527599 NBPF26B4DH59 902 aa18.92■□□□□ 0.62
CTNND1-217ENST00000527599 HCSTQ9UBK5 93 aa18.92■□□□□ 0.62
CTNND1-217ENST00000527599 ANKK1Q8NFD2 765 aa18.89■□□□□ 0.61
CTNND1-217ENST00000527599 FECHP22830 423 aa18.88■□□□□ 0.61
CTNND1-217ENST00000527599 BCAMP50895 628 aa18.88■□□□□ 0.61
CTNND1-217ENST00000527599 PTPN5P54829 565 aa18.88■□□□□ 0.61
CTNND1-217ENST00000527599 FAM161AQ3B820 660 aa18.87■□□□□ 0.61
CTNND1-217ENST00000527599 EYA1Q99502 592 aa18.86■□□□□ 0.61
CTNND1-217ENST00000527599 SOWAHBA6NEL2 793 aa18.85■□□□□ 0.61
CTNND1-217ENST00000527599 HIC1Q14526 733 aa18.85■□□□□ 0.61
CTNND1-217ENST00000527599 GPIHBP1Q8IV16 184 aa18.84■□□□□ 0.61
CTNND1-217ENST00000527599 ADGRG1Q9Y653 693 aa18.84■□□□□ 0.61
CTNND1-217ENST00000527599 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.83■□□□□ 0.6
CTNND1-217ENST00000527599 GNPATO15228 680 aa18.8■□□□□ 0.6
CTNND1-217ENST00000527599 SAMD7Q7Z3H4 446 aa18.8■□□□□ 0.6
CTNND1-217ENST00000527599 TULP1O00294 542 aaPredicted RBP18.77■□□□□ 0.6
CTNND1-217ENST00000527599 LRCH3Q96II8 777 aa18.77■□□□□ 0.6
CTNND1-217ENST00000527599 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.77■□□□□ 0.6
CTNND1-217ENST00000527599 WBP1LQ9NX94 342 aa18.73■□□□□ 0.59
CTNND1-217ENST00000527599 LMOD2Q6P5Q4 547 aa18.72■□□□□ 0.59
CTNND1-217ENST00000527599 RBM46Q8TBY0 533 aaKnown RBP18.71■□□□□ 0.59
CTNND1-217ENST00000527599 HPS5Q9UPZ3 1129 aa18.71■□□□□ 0.59
CTNND1-217ENST00000527599 SWT1Q5T5J6 900 aaKnown RBP18.7■□□□□ 0.58
CTNND1-217ENST00000527599 TSR3Q9UJK0 312 aaKnown RBP18.69■□□□□ 0.58
CTNND1-217ENST00000527599 PXYLP1Q8TE99 480 aa18.68■□□□□ 0.58
CTNND1-217ENST00000527599 RCCD1A6NED2 376 aa18.66■□□□□ 0.58
CTNND1-217ENST00000527599 METTL3Q86U44 580 aaKnown RBP18.65■□□□□ 0.58
CTNND1-217ENST00000527599 DNAJB2P25686 324 aa18.64■□□□□ 0.57
CTNND1-217ENST00000527599 OATP04181 439 aa18.63■□□□□ 0.57
CTNND1-217ENST00000527599 TMEM134Q9H6X4 195 aa18.63■□□□□ 0.57
CTNND1-217ENST00000527599 PPP4CP60510 307 aa18.61■□□□□ 0.57
CTNND1-217ENST00000527599 HDGFP51858 240 aaKnown RBP18.6■□□□□ 0.57
CTNND1-217ENST00000527599 PHOX2BQ99453 314 aa18.6■□□□□ 0.57
CTNND1-217ENST00000527599 PLA2G2EQ9NZK7 142 aa18.59■□□□□ 0.57
CTNND1-217ENST00000527599 RNF40O75150 1001 aa18.58■□□□□ 0.56
CTNND1-217ENST00000527599 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.57■□□□□ 0.56
CTNND1-217ENST00000527599 NLRP7Q8WX94 980 aa18.57■□□□□ 0.56
CTNND1-217ENST00000527599 MAP2K5Q13163 448 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms