RNA–Protein interactions for RNA: ENST00000527125.1

SCN3B-203, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 3

Gene SCN3B, Length 3,289 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-203ENST00000527125 SLC4A1APQ9BWU0 796 aaKnown RBP12.52□□□□□ -0.41
SCN3B-203ENST00000527125 MYBBP1AQ9BQG0 1328 aaKnown RBP12.52□□□□□ -0.41
SCN3B-203ENST00000527125 IFT140Q96RY7 1462 aa12.52□□□□□ -0.41
SCN3B-203ENST00000527125 MS4A1P11836 297 aa12.52□□□□□ -0.41
SCN3B-203ENST00000527125 IQGAP3Q86VI3 1631 aa12.51□□□□□ -0.41
SCN3B-203ENST00000527125 IQGAP1P46940 1657 aa12.51□□□□□ -0.41
SCN3B-203ENST00000527125 PREX2Q70Z35 1606 aa12.51□□□□□ -0.41
SCN3B-203ENST00000527125 PLEKHH2Q8IVE3 1493 aa12.51□□□□□ -0.41
SCN3B-203ENST00000527125 BACH2Q9BYV9 841 aa12.51□□□□□ -0.41
SCN3B-203ENST00000527125 ANKRD50Q9ULJ7 1429 aa12.51□□□□□ -0.41
SCN3B-203ENST00000527125 PER1O15534 1290 aaPredicted RBP12.5□□□□□ -0.41
SCN3B-203ENST00000527125 RTN4Q9NQC3 1192 aaKnown RBP12.5□□□□□ -0.41
SCN3B-203ENST00000527125 PRAG1Q86YV5 1406 aa12.5□□□□□ -0.41
SCN3B-203ENST00000527125 TCERG1O14776 1098 aaKnown RBP12.5□□□□□ -0.41
SCN3B-203ENST00000527125 CCDC136Q96JN2 1154 aa12.5□□□□□ -0.41
SCN3B-203ENST00000527125 RALBP1Q15311 655 aa12.49□□□□□ -0.41
SCN3B-203ENST00000527125 MAGI2Q86UL8 1455 aa12.49□□□□□ -0.41
SCN3B-203ENST00000527125 MYOM1P52179 1685 aa12.49□□□□□ -0.41
SCN3B-203ENST00000527125 SAMD9LQ8IVG5 1584 aa12.49□□□□□ -0.41
SCN3B-203ENST00000527125 USP35Q9P2H5 1018 aa12.49□□□□□ -0.41
SCN3B-203ENST00000527125 EIF2AK4Q9P2K8 1649 aaKnown RBP12.48□□□□□ -0.41
SCN3B-203ENST00000527125 FAM135AQ9P2D6 1515 aa12.48□□□□□ -0.41
SCN3B-203ENST00000527125 ATP10AO60312 1499 aa12.48□□□□□ -0.41
SCN3B-203ENST00000527125 PLA2R1Q13018 1463 aa12.48□□□□□ -0.41
SCN3B-203ENST00000527125 PLB1Q6P1J6 1458 aa12.48□□□□□ -0.41
SCN3B-203ENST00000527125 PDE3BQ13370 1112 aa12.47□□□□□ -0.41
SCN3B-203ENST00000527125 PLXNC1O60486 1568 aa12.47□□□□□ -0.41
SCN3B-203ENST00000527125 ANKRD30AQ9BXX3 1397 aa12.47□□□□□ -0.41
SCN3B-203ENST00000527125 ANP32AP39687 249 aaKnown RBP12.47□□□□□ -0.41
SCN3B-203ENST00000527125 C9orf84Q5VXU9 1444 aa12.46□□□□□ -0.41
SCN3B-203ENST00000527125 KDM2BQ8NHM5 1336 aa12.46□□□□□ -0.42
SCN3B-203ENST00000527125 EXOC6Q8TAG9 804 aa12.45□□□□□ -0.42
SCN3B-203ENST00000527125 NUP160Q12769 1436 aa12.45□□□□□ -0.42
SCN3B-203ENST00000527125 PDE4AP27815 886 aa12.45□□□□□ -0.42
SCN3B-203ENST00000527125 ZBTB47Q9UFB7 747 aaPredicted RBP12.45□□□□□ -0.42
SCN3B-203ENST00000527125 A2MP01023 1474 aa12.44□□□□□ -0.42
SCN3B-203ENST00000527125 MAGI1Q96QZ7 1491 aaPredicted RBP12.44□□□□□ -0.42
SCN3B-203ENST00000527125 PKD2Q13563 968 aa12.44□□□□□ -0.42
SCN3B-203ENST00000527125 NBR1Q14596 966 aa12.44□□□□□ -0.42
SCN3B-203ENST00000527125 CCDC141Q6ZP82 1450 aa12.43□□□□□ -0.42
SCN3B-203ENST00000527125 ABCC2Q92887 1545 aa12.42□□□□□ -0.42
SCN3B-203ENST00000527125 MADDQ8WXG6 1647 aa12.42□□□□□ -0.42
SCN3B-203ENST00000527125 SPHKAPQ2M3C7 1700 aa12.42□□□□□ -0.42
SCN3B-203ENST00000527125 RCAN3Q9UKA8 241 aa12.42□□□□□ -0.42
SCN3B-203ENST00000527125 ATP10BO94823 1461 aa12.41□□□□□ -0.42
SCN3B-203ENST00000527125 ZNF521Q96K83 1311 aa12.4□□□□□ -0.42
SCN3B-203ENST00000527125 SYNMO15061 1565 aa12.4□□□□□ -0.42
SCN3B-203ENST00000527125 WDR7Q9Y4E6 1490 aa12.4□□□□□ -0.42
SCN3B-203ENST00000527125 ST20-MTHFSA0A0A6YYL1 179 aa12.4□□□□□ -0.43
SCN3B-203ENST00000527125 NLRP13Q86W25 1043 aa12.4□□□□□ -0.43
SCN3B-203ENST00000527125 TESK2Q96S53 571 aa12.4□□□□□ -0.43
SCN3B-203ENST00000527125 CEP152O94986 1710 aa12.39□□□□□ -0.43
SCN3B-203ENST00000527125 KIAA1210Q9ULL0 1709 aa12.39□□□□□ -0.43
SCN3B-203ENST00000527125 TMC1Q8TDI8 760 aa12.39□□□□□ -0.43
SCN3B-203ENST00000527125 ANO8Q9HCE9 1232 aaPredicted RBP12.38□□□□□ -0.43
SCN3B-203ENST00000527125 NEURL4Q96JN8 1562 aa12.37□□□□□ -0.43
SCN3B-203ENST00000527125 IL27Q8NEV9 243 aa12.37□□□□□ -0.43
SCN3B-203ENST00000527125 DISP3Q9P2K9 1392 aa12.37□□□□□ -0.43
SCN3B-203ENST00000527125 CFDP1Q9UEE9 299 aaPredicted RBP12.36□□□□□ -0.43
SCN3B-203ENST00000527125 CARD11Q9BXL7 1154 aa12.36□□□□□ -0.43
SCN3B-203ENST00000527125 NUP155O75694 1391 aa12.36□□□□□ -0.43
SCN3B-203ENST00000527125 TRMT2AQ8IZ69 625 aaKnown RBP12.34□□□□□ -0.43
SCN3B-203ENST00000527125 CDCA7LQ96GN5 454 aa12.34□□□□□ -0.43
SCN3B-203ENST00000527125 DEPDC5O75140 1603 aa12.34□□□□□ -0.43
SCN3B-203ENST00000527125 DUOX2Q9NRD8 1548 aa12.34□□□□□ -0.43
SCN3B-203ENST00000527125 NLRP1Q9C000 1473 aa12.34□□□□□ -0.43
SCN3B-203ENST00000527125 IFT172Q9UG01 1749 aa12.33□□□□□ -0.44
SCN3B-203ENST00000527125 ERBINQ96RT1 1412 aa12.33□□□□□ -0.44
SCN3B-203ENST00000527125 TTC37Q6PGP7 1564 aa12.33□□□□□ -0.44
SCN3B-203ENST00000527125 PPM1GO15355 546 aaPredicted RBP12.33□□□□□ -0.44
SCN3B-203ENST00000527125 SHPRHQ149N8 1683 aa12.32□□□□□ -0.44
SCN3B-203ENST00000527125 SALL2Q9Y467 1007 aaPredicted RBP12.32□□□□□ -0.44
SCN3B-203ENST00000527125 C8orf34Q49A92 452 aa12.32□□□□□ -0.44
SCN3B-203ENST00000527125 MYO3AQ8NEV4 1616 aa12.32□□□□□ -0.44
SCN3B-203ENST00000527125 PLEKHH1Q9ULM0 1364 aa12.31□□□□□ -0.44
SCN3B-203ENST00000527125 SHROOM2Q13796 1616 aa12.31□□□□□ -0.44
SCN3B-203ENST00000527125 PIK3C2GO75747 1445 aa12.3□□□□□ -0.44
SCN3B-203ENST00000527125 RTL5Q5HYW3 569 aaPredicted RBP12.3□□□□□ -0.44
SCN3B-203ENST00000527125 NPC1L1Q9UHC9 1359 aa12.3□□□□□ -0.44
SCN3B-203ENST00000527125 CRBNQ96SW2 442 aa12.29□□□□□ -0.44
SCN3B-203ENST00000527125 SCAPERQ9BY12 1400 aa12.29□□□□□ -0.44
SCN3B-203ENST00000527125 SYCP2Q9BX26 1530 aa12.29□□□□□ -0.44
SCN3B-203ENST00000527125 NEFMP07197 916 aa12.29□□□□□ -0.44
SCN3B-203ENST00000527125 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.28□□□□□ -0.44
SCN3B-203ENST00000527125 ZC3H13Q5T200 1668 aaKnown RBP12.28□□□□□ -0.44
SCN3B-203ENST00000527125 DUSP27Q5VZP5 1158 aa12.28□□□□□ -0.44
SCN3B-203ENST00000527125 ARID3CA6NKF2 412 aa12.28□□□□□ -0.44
SCN3B-203ENST00000527125 C20orf194Q5TEA3 1177 aa12.28□□□□□ -0.44
SCN3B-203ENST00000527125 USP19O94966 1318 aa12.27□□□□□ -0.44
SCN3B-203ENST00000527125 VWDEQ8N2E2 1590 aa12.27□□□□□ -0.44
SCN3B-203ENST00000527125 DDRGK1Q96HY6 314 aa12.27□□□□□ -0.45
SCN3B-203ENST00000527125 TRPM2O94759 1503 aa12.27□□□□□ -0.45
SCN3B-203ENST00000527125 KDM5AP29375 1690 aaKnown RBP12.27□□□□□ -0.45
SCN3B-203ENST00000527125 CCDC144AA2RUR9 1427 aa12.27□□□□□ -0.45
SCN3B-203ENST00000527125 EIF3AQ14152 1382 aaKnown RBP12.27□□□□□ -0.45
SCN3B-203ENST00000527125 CARMIL2Q6F5E8 1435 aa12.26□□□□□ -0.45
SCN3B-203ENST00000527125 NBPF1Q3BBV0 1214 aa12.26□□□□□ -0.45
SCN3B-203ENST00000527125 ASXL1Q8IXJ9 1541 aa12.26□□□□□ -0.45
SCN3B-203ENST00000527125 SKAP1Q86WV1 359 aa12.26□□□□□ -0.45
SCN3B-203ENST00000527125 DCAF11Q8TEB1 546 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms