RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 PKD2Q13563 968 aa30.04■■■□□ 2.4
PKP3-204ENST00000526971 ILDR2Q71H61 639 aa30.04■■■□□ 2.4
PKP3-204ENST00000526971 KDM5DQ9BY66 1539 aa30.03■■■□□ 2.4
PKP3-204ENST00000526971 POLR1AO95602 1720 aaPredicted RBP30.03■■■□□ 2.4
PKP3-204ENST00000526971 ARHGEF5Q12774 1597 aa30.02■■■□□ 2.4
PKP3-204ENST00000526971 NEURL4Q96JN8 1562 aa30■■■□□ 2.39
PKP3-204ENST00000526971 MAP3K1Q13233 1512 aa30■■■□□ 2.39
PKP3-204ENST00000526971 FAM135AQ9P2D6 1515 aa30■■■□□ 2.39
PKP3-204ENST00000526971 PZPP20742 1482 aa29.99■■■□□ 2.39
PKP3-204ENST00000526971 KIF3BO15066 747 aa29.99■■■□□ 2.39
PKP3-204ENST00000526971 FBXO31Q5XUX0 539 aaPredicted RBP29.97■■■□□ 2.39
PKP3-204ENST00000526971 LRRC9Q6ZRR7 1453 aa29.97■■■□□ 2.39
PKP3-204ENST00000526971 TNRQ92752 1358 aa29.96■■■□□ 2.39
PKP3-204ENST00000526971 KANK4Q5T7N3 995 aaPredicted RBP29.95■■■□□ 2.39
PKP3-204ENST00000526971 APLP2Q06481 763 aa29.94■■■□□ 2.38
PKP3-204ENST00000526971 RNF17Q9BXT8 1623 aaKnown RBP29.91■■■□□ 2.38
PKP3-204ENST00000526971 RSPH4AQ5TD94 716 aa29.89■■■□□ 2.38
PKP3-204ENST00000526971 MAST1Q9Y2H9 1570 aa29.89■■■□□ 2.38
PKP3-204ENST00000526971 UBAP1LF5GYI3 381 aa29.88■■■□□ 2.37
PKP3-204ENST00000526971 WASHC2CQ9Y4E1 1318 aa29.87■■■□□ 2.37
PKP3-204ENST00000526971 MROH1Q8NDA8 1641 aa29.84■■■□□ 2.37
PKP3-204ENST00000526971 ZC3H13Q5T200 1668 aaKnown RBP29.83■■■□□ 2.37
PKP3-204ENST00000526971 ABCC3O15438 1527 aa29.83■■■□□ 2.37
PKP3-204ENST00000526971 MIA2Q96PC5 1412 aa29.83■■■□□ 2.37
PKP3-204ENST00000526971 NLRP1Q9C000 1473 aa29.82■■■□□ 2.36
PKP3-204ENST00000526971 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.82■■■□□ 2.36
PKP3-204ENST00000526971 EIF2AK4Q9P2K8 1649 aaKnown RBP29.82■■■□□ 2.36
PKP3-204ENST00000526971 UGGT1Q9NYU2 1555 aa29.81■■■□□ 2.36
PKP3-204ENST00000526971 VWDEQ8N2E2 1590 aa29.81■■■□□ 2.36
PKP3-204ENST00000526971 CEP152O94986 1710 aa29.8■■■□□ 2.36
PKP3-204ENST00000526971 TSPY4P0CV99 314 aa29.8■■■□□ 2.36
PKP3-204ENST00000526971 TSPY10P0CW01 314 aa29.8■■■□□ 2.36
PKP3-204ENST00000526971 DEPDC5O75140 1603 aa29.79■■■□□ 2.36
PKP3-204ENST00000526971 SOCS7O14512 581 aa29.79■■■□□ 2.36
PKP3-204ENST00000526971 CPS1P31327 1500 aa29.79■■■□□ 2.36
PKP3-204ENST00000526971 SHANK2Q9UPX8 1470 aa29.79■■■□□ 2.36
PKP3-204ENST00000526971 CFAP65Q6ZU64 1925 aaKnown RBP29.76■■■□□ 2.35
PKP3-204ENST00000526971 IQGAP1P46940 1657 aa29.75■■■□□ 2.35
PKP3-204ENST00000526971 MED14O60244 1454 aa29.74■■■□□ 2.35
PKP3-204ENST00000526971 MYOM3Q5VTT5 1437 aa29.74■■■□□ 2.35
PKP3-204ENST00000526971 ERVK-7P63135 1459 aa29.73■■■□□ 2.35
PKP3-204ENST00000526971 STRCP1A6NGW2 1772 aa29.72■■■□□ 2.35
PKP3-204ENST00000526971 NPHP4O75161 1426 aaPredicted RBP29.72■■■□□ 2.35
PKP3-204ENST00000526971 ANKLE2Q86XL3 938 aa29.72■■■□□ 2.35
PKP3-204ENST00000526971 CROCC2H7BZ55 1655 aa29.71■■■□□ 2.35
PKP3-204ENST00000526971 ALKQ9UM73 1620 aa29.71■■■□□ 2.35
PKP3-204ENST00000526971 THEMISQ8N1K5 641 aaPredicted RBP29.7■■■□□ 2.35
PKP3-204ENST00000526971 UBR1Q8IWV7 1749 aa29.68■■■□□ 2.34
PKP3-204ENST00000526971 DUOX2Q9NRD8 1548 aa29.66■■■□□ 2.34
PKP3-204ENST00000526971 PRDM15P57071 1507 aaPredicted RBP29.63■■■□□ 2.33
PKP3-204ENST00000526971 HSPA1LP34931 641 aa29.63■■■□□ 2.33
PKP3-204ENST00000526971 PIP4K2BP78356 416 aa29.63■■■□□ 2.33
PKP3-204ENST00000526971 SCAF1Q9H7N4 1312 aaKnown RBP29.63■■■□□ 2.33
PKP3-204ENST00000526971 PTPN23Q9H3S7 1636 aa29.61■■■□□ 2.33
PKP3-204ENST00000526971 MED1Q15648 1581 aaPredicted RBP29.6■■■□□ 2.33
PKP3-204ENST00000526971 ABCC5O15440 1437 aa29.59■■■□□ 2.33
PKP3-204ENST00000526971 TOM1O60784 492 aa29.58■■■□□ 2.33
PKP3-204ENST00000526971 KIF15Q9NS87 1388 aa29.57■■■□□ 2.32
PKP3-204ENST00000526971 SYNMO15061 1565 aa29.56■■■□□ 2.32
PKP3-204ENST00000526971 LRRC7Q96NW7 1537 aa29.55■■■□□ 2.32
PKP3-204ENST00000526971 ERBINQ96RT1 1412 aa29.54■■■□□ 2.32
PKP3-204ENST00000526971 SCAF11Q99590 1463 aaKnown RBP29.53■■■□□ 2.32
PKP3-204ENST00000526971 ARHGAP23Q9P227 1491 aa29.53■■■□□ 2.32
PKP3-204ENST00000526971 ARHGAP31Q2M1Z3 1444 aa29.53■■■□□ 2.32
PKP3-204ENST00000526971 SLIT1O75093 1534 aa29.51■■■□□ 2.32
PKP3-204ENST00000526971 PIK3C2BO00750 1634 aa29.51■■■□□ 2.31
PKP3-204ENST00000526971 DAPK1P53355 1430 aa29.51■■■□□ 2.31
PKP3-204ENST00000526971 FGD6Q6ZV73 1430 aa29.51■■■□□ 2.31
PKP3-204ENST00000526971 XIRP1Q702N8 1843 aaKnown RBP29.49■■■□□ 2.31
PKP3-204ENST00000526971 RRP7BPQ9NSQ0 103 aa29.48■■■□□ 2.31
PKP3-204ENST00000526971 LTKP29376 864 aa29.47■■■□□ 2.31
PKP3-204ENST00000526971 PPARGC1BQ86YN6 1023 aaKnown RBP29.41■■■□□ 2.3
PKP3-204ENST00000526971 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.41■■■□□ 2.3
PKP3-204ENST00000526971 LMTK2Q8IWU2 1503 aa29.4■■■□□ 2.3
PKP3-204ENST00000526971 TXNDC2Q86VQ3 553 aa29.39■■■□□ 2.3
PKP3-204ENST00000526971 KDM5AP29375 1690 aaKnown RBP29.39■■■□□ 2.3
PKP3-204ENST00000526971 SENP3Q9H4L4 574 aaPredicted RBP29.35■■■□□ 2.29
PKP3-204ENST00000526971 TMEM2Q9UHN6 1383 aa29.35■■■□□ 2.29
PKP3-204ENST00000526971 EFCAB6Q5THR3 1501 aa29.35■■■□□ 2.29
PKP3-204ENST00000526971 FAM50AQ14320 339 aaKnown RBP29.34■■■□□ 2.29
PKP3-204ENST00000526971 CHIC2Q9UKJ5 165 aa29.34■■■□□ 2.29
PKP3-204ENST00000526971 KANK1Q14678 1352 aa29.34■■■□□ 2.29
PKP3-204ENST00000526971 ANKRD30AQ9BXX3 1397 aa29.33■■■□□ 2.29
PKP3-204ENST00000526971 ADGRL2O95490 1459 aa29.29■■■□□ 2.28
PKP3-204ENST00000526971 NOS1P29475 1434 aa29.29■■■□□ 2.28
PKP3-204ENST00000526971 EID1Q9Y6B2 187 aa29.29■■■□□ 2.28
PKP3-204ENST00000526971 ADGRB3O60242 1522 aa29.29■■■□□ 2.28
PKP3-204ENST00000526971 IDI1Q13907 227 aa29.28■■■□□ 2.28
PKP3-204ENST00000526971 TET3O43151 1660 aa29.28■■■□□ 2.28
PKP3-204ENST00000526971 MYO5BQ9ULV0 1848 aa29.26■■■□□ 2.27
PKP3-204ENST00000526971 STAG3Q9UJ98 1225 aa29.23■■■□□ 2.27
PKP3-204ENST00000526971 PHF23Q9BUL5 403 aaPredicted RBP29.22■■■□□ 2.27
PKP3-204ENST00000526971 NWD1Q149M9 1564 aa29.2■■■□□ 2.26
PKP3-204ENST00000526971 TMEM94Q12767 1356 aa29.19■■■□□ 2.26
PKP3-204ENST00000526971 GCC2Q8IWJ2 1684 aa29.18■■■□□ 2.26
PKP3-204ENST00000526971 SLC26A8Q96RN1 970 aa29.16■■■□□ 2.26
PKP3-204ENST00000526971 ROBO1Q9Y6N7 1651 aa29.15■■■□□ 2.26
PKP3-204ENST00000526971 ANKRD50Q9ULJ7 1429 aa29.15■■■□□ 2.26
PKP3-204ENST00000526971 KCNA6P17658 529 aa29.14■■■□□ 2.26
PKP3-204ENST00000526971 RPRD2Q5VT52 1461 aaKnown RBP29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms