RNA–Protein interactions for RNA: ENST00000526955.1

PKNOX2-202, Transcript of PBX/knotted 1 homeobox 2, humanhuman

TSL 1 (best)

Gene PKNOX2, Length 4,531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2-202ENST00000526955 EID1Q9Y6B2 187 aa13.31□□□□□ -0.28
PKNOX2-202ENST00000526955 IL27Q8NEV9 243 aa13.31□□□□□ -0.28
PKNOX2-202ENST00000526955 MYH16Q9H6N6 1097 aa13.3□□□□□ -0.28
PKNOX2-202ENST00000526955 CCDC9Q9Y3X0 531 aaKnown RBP13.3□□□□□ -0.28
PKNOX2-202ENST00000526955 KDM5BQ9UGL1 1544 aa13.29□□□□□ -0.28
PKNOX2-202ENST00000526955 CENPQQ7L2Z9 268 aaPredicted RBP13.29□□□□□ -0.28
PKNOX2-202ENST00000526955 KIAA1107Q9UPP5 1409 aa13.29□□□□□ -0.28
PKNOX2-202ENST00000526955 EPRSP07814 1512 aaKnown RBP13.28□□□□□ -0.28
PKNOX2-202ENST00000526955 PKNOX2Q96KN3 472 aa13.28□□□□□ -0.28
PKNOX2-202ENST00000526955 SAMD9Q5K651 1589 aa13.28□□□□□ -0.28
PKNOX2-202ENST00000526955 FAM161AQ3B820 660 aa13.27□□□□□ -0.29
PKNOX2-202ENST00000526955 ABCA5Q8WWZ7 1642 aa13.27□□□□□ -0.29
PKNOX2-202ENST00000526955 DHX29Q7Z478 1369 aaKnown RBP13.27□□□□□ -0.29
PKNOX2-202ENST00000526955 L1TD1Q5T7N2 865 aaKnown RBP13.26□□□□□ -0.29
PKNOX2-202ENST00000526955 RSPH6AQ9H0K4 717 aa13.26□□□□□ -0.29
PKNOX2-202ENST00000526955 DCAF11Q8TEB1 546 aa13.26□□□□□ -0.29
PKNOX2-202ENST00000526955 TEX14Q8IWB6 1497 aa13.26□□□□□ -0.29
PKNOX2-202ENST00000526955 SPATA31E1Q6ZUB1 1445 aa13.26□□□□□ -0.29
PKNOX2-202ENST00000526955 NFKBIBQ15653 356 aa13.25□□□□□ -0.29
PKNOX2-202ENST00000526955 ST20-MTHFSA0A0A6YYL1 179 aa13.25□□□□□ -0.29
PKNOX2-202ENST00000526955 HSP90AA1P07900 732 aaKnown RBP13.25□□□□□ -0.29
PKNOX2-202ENST00000526955 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.25□□□□□ -0.29
PKNOX2-202ENST00000526955 NUP155O75694 1391 aa13.24□□□□□ -0.29
PKNOX2-202ENST00000526955 CRBNQ96SW2 442 aa13.24□□□□□ -0.29
PKNOX2-202ENST00000526955 KNSTRNQ9Y448 316 aa13.24□□□□□ -0.29
PKNOX2-202ENST00000526955 NESP48681 1621 aa13.24□□□□□ -0.29
PKNOX2-202ENST00000526955 WASHC2CQ9Y4E1 1318 aa13.24□□□□□ -0.29
PKNOX2-202ENST00000526955 TMF1P82094 1093 aa13.23□□□□□ -0.29
PKNOX2-202ENST00000526955 ARHGEF11O15085 1522 aa13.23□□□□□ -0.29
PKNOX2-202ENST00000526955 ABCC5O15440 1437 aa13.22□□□□□ -0.29
PKNOX2-202ENST00000526955 CSB-PGBD3P0DP91 1061 aa13.22□□□□□ -0.29
PKNOX2-202ENST00000526955 PLEKHH2Q8IVE3 1493 aa13.22□□□□□ -0.29
PKNOX2-202ENST00000526955 CC2D1BQ5T0F9 858 aaKnown RBP13.21□□□□□ -0.29
PKNOX2-202ENST00000526955 RGS3P49796 1198 aa13.21□□□□□ -0.29
PKNOX2-202ENST00000526955 LRPPRCP42704 1394 aaKnown RBP13.2□□□□□ -0.3
PKNOX2-202ENST00000526955 MAPK8IP3Q9UPT6 1336 aa13.2□□□□□ -0.3
PKNOX2-202ENST00000526955 POLR1AO95602 1720 aaPredicted RBP13.2□□□□□ -0.3
PKNOX2-202ENST00000526955 SRPK2P78362 688 aaKnown RBP13.2□□□□□ -0.3
PKNOX2-202ENST00000526955 JPH4Q96JJ6 628 aa13.19□□□□□ -0.3
PKNOX2-202ENST00000526955 RALGAPBQ86X10 1494 aa13.19□□□□□ -0.3
PKNOX2-202ENST00000526955 CDK13Q14004 1512 aaKnown RBP13.19□□□□□ -0.3
PKNOX2-202ENST00000526955 IQGAP2Q13576 1575 aa13.18□□□□□ -0.3
PKNOX2-202ENST00000526955 TMX4Q9H1E5 349 aaPredicted RBP13.18□□□□□ -0.3
PKNOX2-202ENST00000526955 KIF14Q15058 1648 aa13.18□□□□□ -0.3
PKNOX2-202ENST00000526955 PLIN1O60240 522 aa13.18□□□□□ -0.3
PKNOX2-202ENST00000526955 FRAT1Q92837 279 aaPredicted RBP13.18□□□□□ -0.3
PKNOX2-202ENST00000526955 EIF3AQ14152 1382 aaKnown RBP13.18□□□□□ -0.3
PKNOX2-202ENST00000526955 SOX12O15370 315 aa13.18□□□□□ -0.3
PKNOX2-202ENST00000526955 ANKRD50Q9ULJ7 1429 aa13.18□□□□□ -0.3
PKNOX2-202ENST00000526955 GOLGA2Q08379 1002 aa13.17□□□□□ -0.3
PKNOX2-202ENST00000526955 BRPF3Q9ULD4 1205 aa13.17□□□□□ -0.3
PKNOX2-202ENST00000526955 DNMT1P26358 1616 aaKnown RBP13.17□□□□□ -0.3
PKNOX2-202ENST00000526955 FAM43AQ8N2R8 423 aa13.17□□□□□ -0.3
PKNOX2-202ENST00000526955 ZNF644Q9H582 1327 aaPredicted RBP13.17□□□□□ -0.3
PKNOX2-202ENST00000526955 KIF3BO15066 747 aa13.15□□□□□ -0.3
PKNOX2-202ENST00000526955 INSRP06213 1382 aa13.14□□□□□ -0.31
PKNOX2-202ENST00000526955 CDK11BP21127 795 aaKnown RBP13.14□□□□□ -0.31
PKNOX2-202ENST00000526955 SLC4A3P48751 1232 aa13.14□□□□□ -0.31
PKNOX2-202ENST00000526955 KDM6BO15054 1643 aa13.14□□□□□ -0.31
PKNOX2-202ENST00000526955 DENND4BO75064 1496 aaPredicted RBP13.14□□□□□ -0.31
PKNOX2-202ENST00000526955 DCAF8L1A6NGE4 600 aa13.13□□□□□ -0.31
PKNOX2-202ENST00000526955 CDCA7LQ96GN5 454 aa13.13□□□□□ -0.31
PKNOX2-202ENST00000526955 UHRF1BP1Q6BDS2 1440 aa13.13□□□□□ -0.31
PKNOX2-202ENST00000526955 ARHGEF12Q9NZN5 1544 aa13.13□□□□□ -0.31
PKNOX2-202ENST00000526955 PNNQ9H307 717 aaKnown RBP13.13□□□□□ -0.31
PKNOX2-202ENST00000526955 MAGI3Q5TCQ9 1506 aa13.13□□□□□ -0.31
PKNOX2-202ENST00000526955 STK26Q9P289 416 aa13.13□□□□□ -0.31
PKNOX2-202ENST00000526955 FAM69CQ0P6D2 419 aa13.12□□□□□ -0.31
PKNOX2-202ENST00000526955 SPAG9O60271 1321 aaKnown RBP13.12□□□□□ -0.31
PKNOX2-202ENST00000526955 CCDC144AA2RUR9 1427 aa13.12□□□□□ -0.31
PKNOX2-202ENST00000526955 TROQ12816 1431 aaPredicted RBP13.12□□□□□ -0.31
PKNOX2-202ENST00000526955 SAFB2Q14151 953 aaKnown RBP eCLIP13.12□□□□□ -0.31
PKNOX2-202ENST00000526955 CAMSAP2Q08AD1 1489 aa13.11□□□□□ -0.31
PKNOX2-202ENST00000526955 WDR62O43379 1518 aa13.11□□□□□ -0.31
PKNOX2-202ENST00000526955 LAMC3Q9Y6N6 1575 aa13.11□□□□□ -0.31
PKNOX2-202ENST00000526955 PZPP20742 1482 aa13.11□□□□□ -0.31
PKNOX2-202ENST00000526955 RSPH4AQ5TD94 716 aa13.11□□□□□ -0.31
PKNOX2-202ENST00000526955 NGEFQ8N5V2 710 aa13.11□□□□□ -0.31
PKNOX2-202ENST00000526955 PANK3Q9H999 370 aa13.11□□□□□ -0.31
PKNOX2-202ENST00000526955 HDGFL2Q7Z4V5 671 aaPredicted RBP13.1□□□□□ -0.31
PKNOX2-202ENST00000526955 PARD3Q8TEW0 1356 aa13.1□□□□□ -0.31
PKNOX2-202ENST00000526955 PHF23Q9BUL5 403 aaPredicted RBP13.1□□□□□ -0.31
PKNOX2-202ENST00000526955 KDM5CP41229 1560 aa13.09□□□□□ -0.31
PKNOX2-202ENST00000526955 CGNL1Q0VF96 1302 aa13.09□□□□□ -0.31
PKNOX2-202ENST00000526955 MEX3CQ5U5Q3 659 aaKnown RBP13.09□□□□□ -0.31
PKNOX2-202ENST00000526955 URB2Q14146 1524 aaKnown RBP13.08□□□□□ -0.31
PKNOX2-202ENST00000526955 ITSN2Q9NZM3 1697 aa13.08□□□□□ -0.32
PKNOX2-202ENST00000526955 MBD5Q9P267 1494 aa13.08□□□□□ -0.32
PKNOX2-202ENST00000526955 U2SURPO15042 1029 aaKnown RBP13.08□□□□□ -0.32
PKNOX2-202ENST00000526955 FRAT2O75474 233 aaPredicted RBP13.08□□□□□ -0.32
PKNOX2-202ENST00000526955 NAP1L5Q96NT1 182 aaPredicted RBP13.08□□□□□ -0.32
PKNOX2-202ENST00000526955 PMFBP1Q8TBY8 1022 aa13.07□□□□□ -0.32
PKNOX2-202ENST00000526955 ANP32BQ92688 251 aaKnown RBP13.07□□□□□ -0.32
PKNOX2-202ENST00000526955 GOLGA6L3A6NEY3 463 aa13.07□□□□□ -0.32
PKNOX2-202ENST00000526955 NGDNQ8NEJ9 315 aaKnown RBP13.06□□□□□ -0.32
PKNOX2-202ENST00000526955 AAMPQ13685 434 aa13.06□□□□□ -0.32
PKNOX2-202ENST00000526955 E9PSI1 815 aa13.05□□□□□ -0.32
PKNOX2-202ENST00000526955 PTPRGP23470 1445 aa13.05□□□□□ -0.32
PKNOX2-202ENST00000526955 NCBP3Q53F19 620 aaKnown RBP13.05□□□□□ -0.32
PKNOX2-202ENST00000526955 LRRIQ1Q96JM4 1722 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms