RNA–Protein interactions for RNA: ENST00000526789.1

COMMD9-204, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-204ENST00000526789 ARHGEF12Q9NZN5 1544 aa11.98□□□□□ -0.49
COMMD9-204ENST00000526789 PTPRTO14522 1441 aa11.96□□□□□ -0.49
COMMD9-204ENST00000526789 SAMD9Q5K651 1589 aa11.96□□□□□ -0.5
COMMD9-204ENST00000526789 EFCAB2Q5VUJ9 269 aa11.95□□□□□ -0.5
COMMD9-204ENST00000526789 ZNF579Q8NAF0 562 aaKnown RBP11.94□□□□□ -0.5
COMMD9-204ENST00000526789 PCDH10Q9P2E7 1040 aa11.94□□□□□ -0.5
COMMD9-204ENST00000526789 PIP4K2BP78356 416 aa11.93□□□□□ -0.5
COMMD9-204ENST00000526789 AFAP1Q8N556 730 aa11.92□□□□□ -0.5
COMMD9-204ENST00000526789 CDK13Q14004 1512 aaKnown RBP11.91□□□□□ -0.5
COMMD9-204ENST00000526789 ZNF335Q9H4Z2 1342 aaPredicted RBP11.91□□□□□ -0.5
COMMD9-204ENST00000526789 LTBP4Q8N2S1 1624 aa11.91□□□□□ -0.5
COMMD9-204ENST00000526789 ZRANB1Q9UGI0 708 aa11.91□□□□□ -0.5
COMMD9-204ENST00000526789 PLCH2O75038 1416 aa11.91□□□□□ -0.5
COMMD9-204ENST00000526789 C3P01024 1663 aa11.91□□□□□ -0.5
COMMD9-204ENST00000526789 NCKAP5LQ9HCH0 1330 aa11.9□□□□□ -0.5
COMMD9-204ENST00000526789 IQSEC2Q5JU85 1478 aa11.9□□□□□ -0.5
COMMD9-204ENST00000526789 PLCD3Q8N3E9 789 aa11.9□□□□□ -0.5
COMMD9-204ENST00000526789 MYO5CQ9NQX4 1742 aa11.9□□□□□ -0.5
COMMD9-204ENST00000526789 TRAPPC8Q9Y2L5 1435 aa11.89□□□□□ -0.51
COMMD9-204ENST00000526789 GALR2O43603 387 aaPredicted RBP11.89□□□□□ -0.51
COMMD9-204ENST00000526789 CDK11AQ9UQ88 783 aaPredicted RBP11.89□□□□□ -0.51
COMMD9-204ENST00000526789 ARHGAP5Q13017 1502 aa11.89□□□□□ -0.51
COMMD9-204ENST00000526789 ZNF518AQ6AHZ1 1483 aa11.89□□□□□ -0.51
COMMD9-204ENST00000526789 CAMSAP1Q5T5Y3 1602 aa11.88□□□□□ -0.51
COMMD9-204ENST00000526789 NCOA1Q15788 1441 aa11.87□□□□□ -0.51
COMMD9-204ENST00000526789 KLHL34Q8N239 644 aa11.87□□□□□ -0.51
COMMD9-204ENST00000526789 HSPA1LP34931 641 aa11.86□□□□□ -0.51
COMMD9-204ENST00000526789 MIER1Q8N108 512 aa11.86□□□□□ -0.51
COMMD9-204ENST00000526789 SUPT6HQ7KZ85 1726 aaKnown RBP11.86□□□□□ -0.51
COMMD9-204ENST00000526789 MED1Q15648 1581 aaPredicted RBP11.84□□□□□ -0.51
COMMD9-204ENST00000526789 DIP2CQ9Y2E4 1556 aa11.84□□□□□ -0.51
COMMD9-204ENST00000526789 TOM1O60784 492 aa11.83□□□□□ -0.52
COMMD9-204ENST00000526789 KIF14Q15058 1648 aa11.82□□□□□ -0.52
COMMD9-204ENST00000526789 CLIP1P30622 1438 aa11.82□□□□□ -0.52
COMMD9-204ENST00000526789 CNTLNQ9NXG0 1405 aa11.82□□□□□ -0.52
COMMD9-204ENST00000526789 PKD2Q13563 968 aa11.81□□□□□ -0.52
COMMD9-204ENST00000526789 SPOCK2Q92563 424 aa11.81□□□□□ -0.52
COMMD9-204ENST00000526789 ZNF777Q9ULD5 760 aaPredicted RBP11.81□□□□□ -0.52
COMMD9-204ENST00000526789 ABCA6Q8N139 1617 aa11.81□□□□□ -0.52
COMMD9-204ENST00000526789 KDM5CP41229 1560 aa11.79□□□□□ -0.52
COMMD9-204ENST00000526789 UBTFP17480 764 aaKnown RBP11.79□□□□□ -0.52
COMMD9-204ENST00000526789 ZMYM3Q14202 1370 aa11.79□□□□□ -0.52
COMMD9-204ENST00000526789 AGLP35573 1532 aa11.77□□□□□ -0.52
COMMD9-204ENST00000526789 GGT6Q6P531 493 aa11.77□□□□□ -0.53
COMMD9-204ENST00000526789 REREQ9P2R6 1566 aa11.76□□□□□ -0.53
COMMD9-204ENST00000526789 PLEKHG5O94827 1062 aa11.76□□□□□ -0.53
COMMD9-204ENST00000526789 NPATQ14207 1427 aa11.76□□□□□ -0.53
COMMD9-204ENST00000526789 MLH3Q9UHC1 1453 aa11.76□□□□□ -0.53
COMMD9-204ENST00000526789 TROQ12816 1431 aaPredicted RBP11.75□□□□□ -0.53
COMMD9-204ENST00000526789 FMN1Q68DA7 1419 aa11.75□□□□□ -0.53
COMMD9-204ENST00000526789 PELP1Q8IZL8 1130 aaKnown RBP11.74□□□□□ -0.53
COMMD9-204ENST00000526789 MYO3AQ8NEV4 1616 aa11.74□□□□□ -0.53
COMMD9-204ENST00000526789 CLTCQ00610 1675 aaKnown RBP11.74□□□□□ -0.53
COMMD9-204ENST00000526789 SPAG9O60271 1321 aaKnown RBP11.73□□□□□ -0.53
COMMD9-204ENST00000526789 CEP170BQ9Y4F5 1589 aaPredicted RBP11.73□□□□□ -0.53
COMMD9-204ENST00000526789 CDC42BPBQ9Y5S2 1711 aa11.73□□□□□ -0.53
COMMD9-204ENST00000526789 MROH2AA6NES4 1674 aa11.72□□□□□ -0.53
COMMD9-204ENST00000526789 ITSN2Q9NZM3 1697 aa11.72□□□□□ -0.53
COMMD9-204ENST00000526789 PLA2R1Q13018 1463 aa11.72□□□□□ -0.53
COMMD9-204ENST00000526789 KIDINS220Q9ULH0 1771 aa11.72□□□□□ -0.53
COMMD9-204ENST00000526789 ZBTB47Q9UFB7 747 aaPredicted RBP11.71□□□□□ -0.53
COMMD9-204ENST00000526789 ABCC1P33527 1531 aa11.7□□□□□ -0.54
COMMD9-204ENST00000526789 EEA1Q15075 1411 aa11.7□□□□□ -0.54
COMMD9-204ENST00000526789 ZNF142P52746 1687 aaPredicted RBP11.7□□□□□ -0.54
COMMD9-204ENST00000526789 PREX2Q70Z35 1606 aa11.69□□□□□ -0.54
COMMD9-204ENST00000526789 HNRNPMP52272 730 aaKnown RBP eCLIP11.69□□□□□ -0.54
COMMD9-204ENST00000526789 LCE2DQ5TA82 110 aaPredicted RBP11.69□□□□□ -0.54
COMMD9-204ENST00000526789 CPS1P31327 1500 aa11.69□□□□□ -0.54
COMMD9-204ENST00000526789 TCOF1Q13428 1488 aaKnown RBP11.69□□□□□ -0.54
COMMD9-204ENST00000526789 PTPRKQ15262 1439 aa11.69□□□□□ -0.54
COMMD9-204ENST00000526789 POTEJP0CG39 1038 aa11.68□□□□□ -0.54
COMMD9-204ENST00000526789 FAM163AQ96GL9 167 aaPredicted RBP11.68□□□□□ -0.54
COMMD9-204ENST00000526789 SHANK2Q9UPX8 1470 aa11.68□□□□□ -0.54
COMMD9-204ENST00000526789 ANKLE2Q86XL3 938 aa11.67□□□□□ -0.54
COMMD9-204ENST00000526789 PHF12Q96QT6 1004 aa11.67□□□□□ -0.54
COMMD9-204ENST00000526789 CREBZFQ9NS37 354 aa11.67□□□□□ -0.54
COMMD9-204ENST00000526789 SAMD9LQ8IVG5 1584 aa11.66□□□□□ -0.54
COMMD9-204ENST00000526789 POLR1AO95602 1720 aaPredicted RBP11.66□□□□□ -0.54
COMMD9-204ENST00000526789 A2ML1A8K2U0 1454 aa11.65□□□□□ -0.54
COMMD9-204ENST00000526789 METRNQ9UJH8 293 aa11.65□□□□□ -0.54
COMMD9-204ENST00000526789 SYCP2Q9BX26 1530 aa11.65□□□□□ -0.55
COMMD9-204ENST00000526789 A2MP01023 1474 aa11.64□□□□□ -0.55
COMMD9-204ENST00000526789 DNMT1P26358 1616 aaKnown RBP11.64□□□□□ -0.55
COMMD9-204ENST00000526789 ATP7AQ04656 1500 aa11.63□□□□□ -0.55
COMMD9-204ENST00000526789 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.63□□□□□ -0.55
COMMD9-204ENST00000526789 CDC42BPAQ5VT25 1732 aa11.63□□□□□ -0.55
COMMD9-204ENST00000526789 LRRIQ1Q96JM4 1722 aa11.63□□□□□ -0.55
COMMD9-204ENST00000526789 ARHGAP35Q9NRY4 1499 aa11.63□□□□□ -0.55
COMMD9-204ENST00000526789 PAK3O75914 559 aaPredicted RBP11.62□□□□□ -0.55
COMMD9-204ENST00000526789 FBXO31Q5XUX0 539 aaPredicted RBP11.62□□□□□ -0.55
COMMD9-204ENST00000526789 MAMSTRQ6ZN01 415 aa11.62□□□□□ -0.55
COMMD9-204ENST00000526789 THEMISQ8N1K5 641 aaPredicted RBP11.62□□□□□ -0.55
COMMD9-204ENST00000526789 CFDP1Q9UEE9 299 aaPredicted RBP11.62□□□□□ -0.55
COMMD9-204ENST00000526789 TNRQ92752 1358 aa11.62□□□□□ -0.55
COMMD9-204ENST00000526789 ECM2O94769 699 aaPredicted RBP11.61□□□□□ -0.55
COMMD9-204ENST00000526789 NPHP4O75161 1426 aaPredicted RBP11.6□□□□□ -0.55
COMMD9-204ENST00000526789 CCDC18Q5T9S5 1454 aa11.59□□□□□ -0.55
COMMD9-204ENST00000526789 CIZ1Q9ULV3 898 aaPredicted RBP11.59□□□□□ -0.55
COMMD9-204ENST00000526789 NEURL4Q96JN8 1562 aa11.58□□□□□ -0.55
COMMD9-204ENST00000526789 KIF3BO15066 747 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms