RNA–Protein interactions for RNA: ENST00000526570.5

FGFR1-227, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 5,528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-227ENST00000526570 NUTM2DQ5VT03 806 aaPredicted RBP15.47■□□□□ 0.07
FGFR1-227ENST00000526570 SYAP1Q96A49 352 aaPredicted RBP15.47■□□□□ 0.07
FGFR1-227ENST00000526570 PAK3O75914 559 aaPredicted RBP15.46■□□□□ 0.07
FGFR1-227ENST00000526570 HSPA5P11021 654 aaKnown RBP15.46■□□□□ 0.07
FGFR1-227ENST00000526570 NFKBIBQ15653 356 aa15.46■□□□□ 0.07
FGFR1-227ENST00000526570 ROCK2O75116 1388 aaKnown RBP15.44■□□□□ 0.06
FGFR1-227ENST00000526570 MRC2Q9UBG0 1479 aa15.44■□□□□ 0.06
FGFR1-227ENST00000526570 CFTRP13569 1480 aa15.44■□□□□ 0.06
FGFR1-227ENST00000526570 TAF7LQ5H9L4 462 aa15.42■□□□□ 0.06
FGFR1-227ENST00000526570 CWC15Q9P013 229 aaKnown RBP15.42■□□□□ 0.06
FGFR1-227ENST00000526570 MORC1Q86VD1 984 aa15.42■□□□□ 0.06
FGFR1-227ENST00000526570 BBXQ8WY36 941 aaPredicted RBP15.42■□□□□ 0.06
FGFR1-227ENST00000526570 GRIN2BQ13224 1484 aa15.41■□□□□ 0.06
FGFR1-227ENST00000526570 DDX11L8A8MPP1 907 aa15.41■□□□□ 0.06
FGFR1-227ENST00000526570 CALD1Q05682 793 aaKnown RBP15.41■□□□□ 0.06
FGFR1-227ENST00000526570 EID1Q9Y6B2 187 aa15.4■□□□□ 0.06
FGFR1-227ENST00000526570 STK11IPQ8N1F8 1099 aa15.39■□□□□ 0.05
FGFR1-227ENST00000526570 HDGFL2Q7Z4V5 671 aaPredicted RBP15.39■□□□□ 0.05
FGFR1-227ENST00000526570 FAM69CQ0P6D2 419 aa15.39■□□□□ 0.05
FGFR1-227ENST00000526570 HMGXB3Q12766 1538 aa15.39■□□□□ 0.05
FGFR1-227ENST00000526570 AEBP1Q8IUX7 1158 aa15.38■□□□□ 0.05
FGFR1-227ENST00000526570 MAPK8IP2Q13387 824 aaPredicted RBP15.38■□□□□ 0.05
FGFR1-227ENST00000526570 RCAN3Q9UKA8 241 aa15.38■□□□□ 0.05
FGFR1-227ENST00000526570 PRDM2Q13029 1718 aa15.37■□□□□ 0.05
FGFR1-227ENST00000526570 RBM10P98175 930 aaKnown RBP15.37■□□□□ 0.05
FGFR1-227ENST00000526570 RDXP35241 583 aaKnown RBP15.36■□□□□ 0.05
FGFR1-227ENST00000526570 FTSJ3Q8IY81 847 aaKnown RBP15.36■□□□□ 0.05
FGFR1-227ENST00000526570 CFAP44Q96MT7 982 aa15.36■□□□□ 0.05
FGFR1-227ENST00000526570 R3HCC1Q9Y3T6 440 aaKnown RBP15.36■□□□□ 0.05
FGFR1-227ENST00000526570 IFT140Q96RY7 1462 aa15.34■□□□□ 0.05
FGFR1-227ENST00000526570 CHMP4BQ9H444 224 aaKnown RBP15.34■□□□□ 0.05
FGFR1-227ENST00000526570 L3MBTL2Q969R5 705 aa15.34■□□□□ 0.05
FGFR1-227ENST00000526570 SYNJ1O43426 1573 aa15.33■□□□□ 0.04
FGFR1-227ENST00000526570 EIF3AQ14152 1382 aaKnown RBP15.33■□□□□ 0.04
FGFR1-227ENST00000526570 TOPBP1Q92547 1522 aa15.32■□□□□ 0.04
FGFR1-227ENST00000526570 SKOR2Q2VWA4 1001 aaPredicted RBP15.32■□□□□ 0.04
FGFR1-227ENST00000526570 MS4A1P11836 297 aa15.31■□□□□ 0.04
FGFR1-227ENST00000526570 FAM161AQ3B820 660 aa15.3■□□□□ 0.04
FGFR1-227ENST00000526570 TSPYL1Q9H0U9 437 aa15.3■□□□□ 0.04
FGFR1-227ENST00000526570 PRG4Q92954 1404 aaPredicted RBP15.3■□□□□ 0.04
FGFR1-227ENST00000526570 PHF14O94880 888 aa15.3■□□□□ 0.04
FGFR1-227ENST00000526570 KTN1Q86UP2 1357 aaKnown RBP15.3■□□□□ 0.04
FGFR1-227ENST00000526570 NPHP1O15259 732 aa15.29■□□□□ 0.04
FGFR1-227ENST00000526570 NEFHP12036 1026 aa15.29■□□□□ 0.04
FGFR1-227ENST00000526570 BICRAQ9NZM4 1560 aa15.29■□□□□ 0.04
FGFR1-227ENST00000526570 DEF6Q9H4E7 631 aa15.29■□□□□ 0.04
FGFR1-227ENST00000526570 DNAJC5BQ9UF47 199 aa15.29■□□□□ 0.04
FGFR1-227ENST00000526570 MRE11P49959 708 aa15.28■□□□□ 0.04
FGFR1-227ENST00000526570 CCDC144AA2RUR9 1427 aa15.28■□□□□ 0.04
FGFR1-227ENST00000526570 ZNF644Q9H582 1327 aaPredicted RBP15.27■□□□□ 0.04
FGFR1-227ENST00000526570 HSP90AB3PQ58FF7 597 aa15.27■□□□□ 0.04
FGFR1-227ENST00000526570 NUTM2FA1L443 756 aa15.27■□□□□ 0.03
FGFR1-227ENST00000526570 CSB-PGBD3P0DP91 1061 aa15.27■□□□□ 0.03
FGFR1-227ENST00000526570 IRX3P78415 501 aaPredicted RBP15.27■□□□□ 0.03
FGFR1-227ENST00000526570 POLA1P09884 1462 aaPredicted RBP15.27■□□□□ 0.03
FGFR1-227ENST00000526570 TRAK1Q9UPV9 953 aa15.27■□□□□ 0.03
FGFR1-227ENST00000526570 CUX1P39880 1505 aa15.27■□□□□ 0.03
FGFR1-227ENST00000526570 SNAPC4Q5SXM2 1469 aa15.26■□□□□ 0.03
FGFR1-227ENST00000526570 DIAPH3Q9NSV4 1193 aa15.25■□□□□ 0.03
FGFR1-227ENST00000526570 H0YHG0 523 aa15.25■□□□□ 0.03
FGFR1-227ENST00000526570 MFAP1P55081 439 aaKnown RBP15.25■□□□□ 0.03
FGFR1-227ENST00000526570 MEX3CQ5U5Q3 659 aaKnown RBP15.25■□□□□ 0.03
FGFR1-227ENST00000526570 KIF21BO75037 1637 aa15.25■□□□□ 0.03
FGFR1-227ENST00000526570 TPM4P67936 248 aa15.24■□□□□ 0.03
FGFR1-227ENST00000526570 PAXIP1Q6ZW49 1069 aaPredicted RBP15.24■□□□□ 0.03
FGFR1-227ENST00000526570 RTF1Q92541 710 aaKnown RBP15.24■□□□□ 0.03
FGFR1-227ENST00000526570 ARGLU1Q9NWB6 273 aaPredicted RBP15.24■□□□□ 0.03
FGFR1-227ENST00000526570 NGDNQ8NEJ9 315 aaKnown RBP15.24■□□□□ 0.03
FGFR1-227ENST00000526570 MYOM3Q5VTT5 1437 aa15.23■□□□□ 0.03
FGFR1-227ENST00000526570 FRAT2O75474 233 aaPredicted RBP15.23■□□□□ 0.03
FGFR1-227ENST00000526570 RRP12Q5JTH9 1297 aaKnown RBP15.23■□□□□ 0.03
FGFR1-227ENST00000526570 TERF2IPQ9NYB0 399 aa15.23■□□□□ 0.03
FGFR1-227ENST00000526570 DDX49Q9Y6V7 483 aaKnown RBP15.22■□□□□ 0.03
FGFR1-227ENST00000526570 FOXD4L1Q9NU39 408 aa15.22■□□□□ 0.03
FGFR1-227ENST00000526570 TOP2BQ02880 1626 aa15.22■□□□□ 0.03
FGFR1-227ENST00000526570 GNL2Q13823 731 aaKnown RBP15.22■□□□□ 0.03
FGFR1-227ENST00000526570 CCDC191Q8NCU4 936 aa15.21■□□□□ 0.03
FGFR1-227ENST00000526570 ZNF592Q92610 1267 aa15.21■□□□□ 0.03
FGFR1-227ENST00000526570 PDCL3Q9H2J4 239 aa15.21■□□□□ 0.03
FGFR1-227ENST00000526570 DNMBPQ6XZF7 1577 aa15.21■□□□□ 0.03
FGFR1-227ENST00000526570 U2AF1L5P0DN76 240 aaPredicted RBP15.21■□□□□ 0.03
FGFR1-227ENST00000526570 MCCP23508 829 aa15.21■□□□□ 0.03
FGFR1-227ENST00000526570 U2AF1Q01081 240 aaKnown RBP eCLIP15.21■□□□□ 0.03
FGFR1-227ENST00000526570 USP8P40818 1118 aa15.21■□□□□ 0.02
FGFR1-227ENST00000526570 KIAA1211Q6ZU35 1233 aa15.21■□□□□ 0.02
FGFR1-227ENST00000526570 EXOC6Q8TAG9 804 aa15.21■□□□□ 0.02
FGFR1-227ENST00000526570 CASKIN1Q8WXD9 1431 aa15.21■□□□□ 0.02
FGFR1-227ENST00000526570 UACAQ9BZF9 1416 aa15.2■□□□□ 0.02
FGFR1-227ENST00000526570 SYNJ2O15056 1496 aa15.2■□□□□ 0.02
FGFR1-227ENST00000526570 FGD6Q6ZV73 1430 aa15.2■□□□□ 0.02
FGFR1-227ENST00000526570 HMGN5P82970 282 aaKnown RBP15.2■□□□□ 0.02
FGFR1-227ENST00000526570 VGFO15240 615 aaPredicted RBP15.19■□□□□ 0.02
FGFR1-227ENST00000526570 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.19■□□□□ 0.02
FGFR1-227ENST00000526570 CCAR2Q8N163 923 aaKnown RBP15.19■□□□□ 0.02
FGFR1-227ENST00000526570 ARHGAP5Q13017 1502 aa15.19■□□□□ 0.02
FGFR1-227ENST00000526570 PRDM10Q9NQV6 1147 aa15.19■□□□□ 0.02
FGFR1-227ENST00000526570 CCDC9Q9Y3X0 531 aaKnown RBP15.18■□□□□ 0.02
FGFR1-227ENST00000526570 ZBED9Q6R2W3 1325 aa15.18■□□□□ 0.02
FGFR1-227ENST00000526570 OS9Q13438 667 aaPredicted RBP15.18■□□□□ 0.02
FGFR1-227ENST00000526570 ERICH3Q5RHP9 1530 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms