RNA–Protein interactions for RNA: ENST00000526335.1

C11orf54-203, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 2

Gene C11orf54, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-203ENST00000526335 CRISPLD2Q9H0B8 497 aa13.64□□□□□ -0.23
C11orf54-203ENST00000526335 ZNF775Q96BV0 537 aaPredicted RBP13.63□□□□□ -0.23
C11orf54-203ENST00000526335 PKD2Q13563 968 aa13.61□□□□□ -0.23
C11orf54-203ENST00000526335 SEPT9Q9UHD8 586 aaPredicted RBP13.61□□□□□ -0.23
C11orf54-203ENST00000526335 TSR3Q9UJK0 312 aaKnown RBP13.6□□□□□ -0.23
C11orf54-203ENST00000526335 HPS5Q9UPZ3 1129 aa13.6□□□□□ -0.23
C11orf54-203ENST00000526335 PCDHGA10Q9Y5H3 936 aa13.59□□□□□ -0.23
C11orf54-203ENST00000526335 MAP3K9P80192 1104 aa13.58□□□□□ -0.24
C11orf54-203ENST00000526335 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.58□□□□□ -0.24
C11orf54-203ENST00000526335 LRCH3Q96II8 777 aa13.56□□□□□ -0.24
C11orf54-203ENST00000526335 PDE4AP27815 886 aa13.52□□□□□ -0.25
C11orf54-203ENST00000526335 FAM98CQ17RN3 349 aaKnown RBP13.52□□□□□ -0.25
C11orf54-203ENST00000526335 V9GY48 417 aaPredicted RBP13.52□□□□□ -0.25
C11orf54-203ENST00000526335 ONECUT3O60422 494 aaPredicted RBP13.51□□□□□ -0.25
C11orf54-203ENST00000526335 TYW1BQ6NUM6 668 aa13.51□□□□□ -0.25
C11orf54-203ENST00000526335 HS6ST3Q8IZP7 471 aa13.51□□□□□ -0.25
C11orf54-203ENST00000526335 FBXW7Q969H0 707 aa13.51□□□□□ -0.25
C11orf54-203ENST00000526335 PDZRN3Q9UPQ7 1066 aa13.51□□□□□ -0.25
C11orf54-203ENST00000526335 NCKAP5LQ9HCH0 1330 aa13.5□□□□□ -0.25
C11orf54-203ENST00000526335 PPP1R18Q6NYC8 613 aa13.47□□□□□ -0.25
C11orf54-203ENST00000526335 TJAP1Q5JTD0 557 aa13.46□□□□□ -0.25
C11orf54-203ENST00000526335 PPP4CP60510 307 aa13.45□□□□□ -0.26
C11orf54-203ENST00000526335 TRIM6-TRIM34B2RNG4 842 aa13.45□□□□□ -0.26
C11orf54-203ENST00000526335 PHF14O94880 888 aa13.45□□□□□ -0.26
C11orf54-203ENST00000526335 LARP6Q9BRS8 491 aaKnown RBP13.43□□□□□ -0.26
C11orf54-203ENST00000526335 C6orf132Q5T0Z8 1188 aa13.42□□□□□ -0.26
C11orf54-203ENST00000526335 DDX27Q96GQ7 796 aaKnown RBP13.41□□□□□ -0.26
C11orf54-203ENST00000526335 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.4□□□□□ -0.26
C11orf54-203ENST00000526335 MTRQ99707 1265 aa13.38□□□□□ -0.27
C11orf54-203ENST00000526335 IL21Q9HBE4 155 aa13.38□□□□□ -0.27
C11orf54-203ENST00000526335 EMILIN3Q9NT22 766 aa13.38□□□□□ -0.27
C11orf54-203ENST00000526335 RYDENQ9NUL5 291 aaKnown RBP13.38□□□□□ -0.27
C11orf54-203ENST00000526335 CHGAP10645 457 aaKnown RBP13.37□□□□□ -0.27
C11orf54-203ENST00000526335 NKX1-1Q15270 411 aaPredicted RBP13.35□□□□□ -0.27
C11orf54-203ENST00000526335 ZNF516Q92618 1163 aa13.32□□□□□ -0.28
C11orf54-203ENST00000526335 RBM33Q96EV2 1170 aaKnown RBP13.32□□□□□ -0.28
C11orf54-203ENST00000526335 EPAS1Q99814 870 aa13.32□□□□□ -0.28
C11orf54-203ENST00000526335 PACS2Q86VP3 889 aa13.31□□□□□ -0.28
C11orf54-203ENST00000526335 SAMD7Q7Z3H4 446 aa13.29□□□□□ -0.28
C11orf54-203ENST00000526335 MFSD10Q14728 455 aa13.27□□□□□ -0.29
C11orf54-203ENST00000526335 POTECB2RU33 542 aa13.26□□□□□ -0.29
C11orf54-203ENST00000526335 TSKSQ9UJT2 592 aa13.26□□□□□ -0.29
C11orf54-203ENST00000526335 NKX2-3Q8TAU0 364 aa13.25□□□□□ -0.29
C11orf54-203ENST00000526335 GGCXP38435 758 aa13.24□□□□□ -0.29
C11orf54-203ENST00000526335 PKDCCQ504Y2 493 aa13.24□□□□□ -0.29
C11orf54-203ENST00000526335 MYT1Q01538 1121 aa13.22□□□□□ -0.29
C11orf54-203ENST00000526335 SMAPO00193 183 aa13.21□□□□□ -0.29
C11orf54-203ENST00000526335 DNAJC5Q9H3Z4 198 aa13.21□□□□□ -0.29
C11orf54-203ENST00000526335 TREML4Q6UXN2 200 aa13.2□□□□□ -0.3
C11orf54-203ENST00000526335 TRIM67Q6ZTA4 783 aa13.19□□□□□ -0.3
C11orf54-203ENST00000526335 RNF40O75150 1001 aa13.17□□□□□ -0.3
C11orf54-203ENST00000526335 DGAT1O75907 488 aa13.17□□□□□ -0.3
C11orf54-203ENST00000526335 APLP1P51693 650 aa13.16□□□□□ -0.3
C11orf54-203ENST00000526335 DDX12PQ92771 950 aa13.16□□□□□ -0.3
C11orf54-203ENST00000526335 TMUB1Q9BVT8 246 aa13.14□□□□□ -0.31
C11orf54-203ENST00000526335 MAP3K7O43318 606 aa13.12□□□□□ -0.31
C11orf54-203ENST00000526335 COPS2P61201 443 aa13.12□□□□□ -0.31
C11orf54-203ENST00000526335 TSR1Q2NL82 804 aaKnown RBP13.12□□□□□ -0.31
C11orf54-203ENST00000526335 DPYSL4O14531 572 aa13.11□□□□□ -0.31
C11orf54-203ENST00000526335 SLC19A1P41440 591 aa13.11□□□□□ -0.31
C11orf54-203ENST00000526335 LCE2AQ5TA79 106 aaPredicted RBP13.11□□□□□ -0.31
C11orf54-203ENST00000526335 CDCA7LQ96GN5 454 aa13.1□□□□□ -0.31
C11orf54-203ENST00000526335 HDGFP51858 240 aaKnown RBP13.09□□□□□ -0.31
C11orf54-203ENST00000526335 EN1Q05925 392 aaPredicted RBP13.08□□□□□ -0.31
C11orf54-203ENST00000526335 NBR1Q14596 966 aa13.07□□□□□ -0.32
C11orf54-203ENST00000526335 PNMA3Q9UL41 463 aa13.07□□□□□ -0.32
C11orf54-203ENST00000526335 FAM187AA6NFU0 413 aa13.07□□□□□ -0.32
C11orf54-203ENST00000526335 TATDN2Q93075 761 aa13.07□□□□□ -0.32
C11orf54-203ENST00000526335 FAM198AQ9UFP1 575 aa13.07□□□□□ -0.32
C11orf54-203ENST00000526335 C3orf80F5H4A9 247 aa13.06□□□□□ -0.32
C11orf54-203ENST00000526335 PRSS12P56730 875 aa13.06□□□□□ -0.32
C11orf54-203ENST00000526335 NBPF26B4DH59 902 aa13.05□□□□□ -0.32
C11orf54-203ENST00000526335 GTPBP6O43824 516 aaPredicted RBP13.05□□□□□ -0.32
C11orf54-203ENST00000526335 PRR20EP86478 221 aa13.03□□□□□ -0.32
C11orf54-203ENST00000526335 PRR20CP86479 221 aa13.03□□□□□ -0.32
C11orf54-203ENST00000526335 PRR20DP86480 221 aa13.03□□□□□ -0.32
C11orf54-203ENST00000526335 PRR20BP86481 221 aa13.03□□□□□ -0.32
C11orf54-203ENST00000526335 PRR20AP86496 221 aa13.03□□□□□ -0.32
C11orf54-203ENST00000526335 SPRYD7Q5W111 196 aa13.03□□□□□ -0.32
C11orf54-203ENST00000526335 RNF223E7ERA6 249 aa13.02□□□□□ -0.33
C11orf54-203ENST00000526335 ZPR1O75312 459 aa13.02□□□□□ -0.33
C11orf54-203ENST00000526335 ZNF598Q86UK7 904 aaKnown RBP13.02□□□□□ -0.33
C11orf54-203ENST00000526335 EMID1Q96A84 441 aaPredicted RBP13.02□□□□□ -0.33
C11orf54-203ENST00000526335 ST8SIA5O15466 376 aa13.01□□□□□ -0.33
C11orf54-203ENST00000526335 STK17AQ9UEE5 414 aa13.01□□□□□ -0.33
C11orf54-203ENST00000526335 CAMK2BQ13554 666 aa12.99□□□□□ -0.33
C11orf54-203ENST00000526335 NECTIN2Q92692 538 aa12.99□□□□□ -0.33
C11orf54-203ENST00000526335 TNFRSF10AO00220 468 aa12.98□□□□□ -0.33
C11orf54-203ENST00000526335 WFS1O76024 890 aa12.97□□□□□ -0.33
C11orf54-203ENST00000526335 ZNF697Q5TEC3 545 aa12.96□□□□□ -0.33
C11orf54-203ENST00000526335 NUDT18Q6ZVK8 323 aa12.96□□□□□ -0.33
C11orf54-203ENST00000526335 CADPS2Q86UW7 1296 aa12.96□□□□□ -0.33
C11orf54-203ENST00000526335 AAASQ9NRG9 546 aa12.96□□□□□ -0.33
C11orf54-203ENST00000526335 CERKQ8TCT0 537 aa12.95□□□□□ -0.34
C11orf54-203ENST00000526335 SLF2Q8IX21 1173 aa12.92□□□□□ -0.34
C11orf54-203ENST00000526335 GDF9O60383 454 aa12.91□□□□□ -0.34
C11orf54-203ENST00000526335 SWT1Q5T5J6 900 aaKnown RBP12.91□□□□□ -0.34
C11orf54-203ENST00000526335 LIAT1Q6ZQX7 453 aa12.91□□□□□ -0.34
C11orf54-203ENST00000526335 ANKLE1Q8NAG6 615 aa12.9□□□□□ -0.34
C11orf54-203ENST00000526335 PPEF1O14829 653 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms