RNA–Protein interactions for RNA: ENST00000526191.1

COPB1-204, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-204ENST00000526191 VSIG10Q8N0Z9 540 aa14.37□□□□□ -0.11
COPB1-204ENST00000526191 RBM33Q96EV2 1170 aaKnown RBP14.37□□□□□ -0.11
COPB1-204ENST00000526191 KCNH8Q96L42 1107 aa14.37□□□□□ -0.11
COPB1-204ENST00000526191 PRIM1P49642 420 aaKnown RBP14.35□□□□□ -0.11
COPB1-204ENST00000526191 ADGRD1Q6QNK2 874 aa14.35□□□□□ -0.11
COPB1-204ENST00000526191 COL9A1P20849 921 aa14.32□□□□□ -0.12
COPB1-204ENST00000526191 TK2O00142 265 aa14.31□□□□□ -0.12
COPB1-204ENST00000526191 MLLT3P42568 568 aaPredicted RBP14.31□□□□□ -0.12
COPB1-204ENST00000526191 EN1Q05925 392 aaPredicted RBP14.31□□□□□ -0.12
COPB1-204ENST00000526191 C6orf132Q5T0Z8 1188 aa14.31□□□□□ -0.12
COPB1-204ENST00000526191 ZBED2Q9BTP6 218 aa14.3□□□□□ -0.12
COPB1-204ENST00000526191 MAP3K7O43318 606 aa14.29□□□□□ -0.12
COPB1-204ENST00000526191 OSBPP22059 807 aa14.29□□□□□ -0.12
COPB1-204ENST00000526191 TSR1Q2NL82 804 aaKnown RBP14.29□□□□□ -0.12
COPB1-204ENST00000526191 PPP1R3GB7ZBB8 358 aa14.28□□□□□ -0.12
COPB1-204ENST00000526191 VPS9D1Q9Y2B5 631 aa14.28□□□□□ -0.12
COPB1-204ENST00000526191 HRO43593 1189 aa14.27□□□□□ -0.13
COPB1-204ENST00000526191 MYT1LQ9UL68 1186 aa14.27□□□□□ -0.13
COPB1-204ENST00000526191 SEMA3EO15041 775 aa14.26□□□□□ -0.13
COPB1-204ENST00000526191 SLC4A5Q9BY07 1137 aa14.25□□□□□ -0.13
COPB1-204ENST00000526191 PROX2Q3B8N5 592 aa14.24□□□□□ -0.13
COPB1-204ENST00000526191 RNF166Q96A37 237 aaPredicted RBP14.22□□□□□ -0.13
COPB1-204ENST00000526191 CDHR5Q9HBB8 845 aa14.22□□□□□ -0.13
COPB1-204ENST00000526191 BHMG1C9JSJ3 638 aaPredicted RBP14.16□□□□□ -0.14
COPB1-204ENST00000526191 TESPA1A2RU30 521 aaPredicted RBP14.15□□□□□ -0.14
COPB1-204ENST00000526191 STAC3Q96MF2 364 aa14.14□□□□□ -0.15
COPB1-204ENST00000526191 TRIM6-TRIM34B2RNG4 842 aa14.13□□□□□ -0.15
COPB1-204ENST00000526191 KIAA1468Q9P260 1216 aa14.12□□□□□ -0.15
COPB1-204ENST00000526191 RABGEF1Q9UJ41 708 aa14.12□□□□□ -0.15
COPB1-204ENST00000526191 NPDC1Q9NQX5 325 aaPredicted RBP14.1□□□□□ -0.15
COPB1-204ENST00000526191 TSKSQ9UJT2 592 aa14.1□□□□□ -0.15
COPB1-204ENST00000526191 CDCA7LQ96GN5 454 aa14.09□□□□□ -0.15
COPB1-204ENST00000526191 FAM198AQ9UFP1 575 aa14.09□□□□□ -0.15
COPB1-204ENST00000526191 PRSS12P56730 875 aa14.08□□□□□ -0.16
COPB1-204ENST00000526191 MRPL50Q8N5N7 158 aaKnown RBP14.08□□□□□ -0.16
COPB1-204ENST00000526191 CERKQ8TCT0 537 aa14.08□□□□□ -0.16
COPB1-204ENST00000526191 NBPF3Q9H094 633 aa14.08□□□□□ -0.16
COPB1-204ENST00000526191 ONECUT3O60422 494 aaPredicted RBP14.07□□□□□ -0.16
COPB1-204ENST00000526191 KCTD12Q96CX2 325 aaKnown RBP14.07□□□□□ -0.16
COPB1-204ENST00000526191 SEPT9Q9UHD8 586 aaPredicted RBP14.06□□□□□ -0.16
COPB1-204ENST00000526191 NUTM2FA1L443 756 aa14.05□□□□□ -0.16
COPB1-204ENST00000526191 RBM26Q5T8P6 1007 aaKnown RBP14.04□□□□□ -0.16
COPB1-204ENST00000526191 GOLGA8CPA6NN73 597 aa14.02□□□□□ -0.17
COPB1-204ENST00000526191 C3orf80F5H4A9 247 aa14.02□□□□□ -0.17
COPB1-204ENST00000526191 PADI6Q6TGC4 694 aa14.02□□□□□ -0.17
COPB1-204ENST00000526191 PTGDRQ13258 359 aa14.01□□□□□ -0.17
COPB1-204ENST00000526191 SMYD5Q6GMV2 418 aa14.01□□□□□ -0.17
COPB1-204ENST00000526191 PACS2Q86VP3 889 aa14.01□□□□□ -0.17
COPB1-204ENST00000526191 SMAPO00193 183 aa14□□□□□ -0.17
COPB1-204ENST00000526191 RBM27Q9P2N5 1060 aaKnown RBP13.99□□□□□ -0.17
COPB1-204ENST00000526191 LAPTM4BQ86VI4 370 aa13.98□□□□□ -0.17
COPB1-204ENST00000526191 WNT2BQ93097 391 aa13.98□□□□□ -0.17
COPB1-204ENST00000526191 TTC13Q8NBP0 860 aa13.97□□□□□ -0.17
COPB1-204ENST00000526191 PNMA3Q9UL41 463 aa13.96□□□□□ -0.17
COPB1-204ENST00000526191 FAM98CQ17RN3 349 aaKnown RBP13.95□□□□□ -0.18
COPB1-204ENST00000526191 THSD4Q6ZMP0 1018 aa13.95□□□□□ -0.18
COPB1-204ENST00000526191 TATDN2Q93075 761 aa13.95□□□□□ -0.18
COPB1-204ENST00000526191 ZFRQ96KR1 1074 aaKnown RBP13.95□□□□□ -0.18
COPB1-204ENST00000526191 NBPF26B4DH59 902 aa13.94□□□□□ -0.18
COPB1-204ENST00000526191 FCHSD2O94868 740 aa13.93□□□□□ -0.18
COPB1-204ENST00000526191 NUDT18Q6ZVK8 323 aa13.93□□□□□ -0.18
COPB1-204ENST00000526191 PTPN5P54829 565 aa13.92□□□□□ -0.18
COPB1-204ENST00000526191 ANKK1Q8NFD2 765 aa13.92□□□□□ -0.18
COPB1-204ENST00000526191 HCSTQ9UBK5 93 aa13.92□□□□□ -0.18
COPB1-204ENST00000526191 GPR37O15354 613 aa13.9□□□□□ -0.18
COPB1-204ENST00000526191 BCAMP50895 628 aa13.9□□□□□ -0.18
COPB1-204ENST00000526191 SLC24A1O60721 1099 aa13.88□□□□□ -0.19
COPB1-204ENST00000526191 SOWAHBA6NEL2 793 aa13.86□□□□□ -0.19
COPB1-204ENST00000526191 FAM161AQ3B820 660 aa13.86□□□□□ -0.19
COPB1-204ENST00000526191 GPIHBP1Q8IV16 184 aa13.86□□□□□ -0.19
COPB1-204ENST00000526191 FECHP22830 423 aa13.85□□□□□ -0.19
COPB1-204ENST00000526191 HIC1Q14526 733 aa13.85□□□□□ -0.19
COPB1-204ENST00000526191 TULP1O00294 542 aaPredicted RBP13.83□□□□□ -0.2
COPB1-204ENST00000526191 SAMD7Q7Z3H4 446 aa13.83□□□□□ -0.2
COPB1-204ENST00000526191 EYA1Q99502 592 aa13.83□□□□□ -0.2
COPB1-204ENST00000526191 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.83□□□□□ -0.2
COPB1-204ENST00000526191 ADGRG1Q9Y653 693 aa13.83□□□□□ -0.2
COPB1-204ENST00000526191 GNPATO15228 680 aa13.82□□□□□ -0.2
COPB1-204ENST00000526191 LRCH3Q96II8 777 aa13.82□□□□□ -0.2
COPB1-204ENST00000526191 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.8□□□□□ -0.2
COPB1-204ENST00000526191 WBP1LQ9NX94 342 aa13.78□□□□□ -0.2
COPB1-204ENST00000526191 HPS5Q9UPZ3 1129 aa13.78□□□□□ -0.2
COPB1-204ENST00000526191 RBM46Q8TBY0 533 aaKnown RBP13.77□□□□□ -0.21
COPB1-204ENST00000526191 SWT1Q5T5J6 900 aaKnown RBP13.76□□□□□ -0.21
COPB1-204ENST00000526191 LMOD2Q6P5Q4 547 aa13.75□□□□□ -0.21
COPB1-204ENST00000526191 TSR3Q9UJK0 312 aaKnown RBP13.75□□□□□ -0.21
COPB1-204ENST00000526191 RNF40O75150 1001 aa13.73□□□□□ -0.21
COPB1-204ENST00000526191 RCCD1A6NED2 376 aa13.72□□□□□ -0.21
COPB1-204ENST00000526191 DNAJB2P25686 324 aa13.72□□□□□ -0.21
COPB1-204ENST00000526191 PXYLP1Q8TE99 480 aa13.72□□□□□ -0.21
COPB1-204ENST00000526191 HDGFP51858 240 aaKnown RBP13.71□□□□□ -0.21
COPB1-204ENST00000526191 METTL3Q86U44 580 aaKnown RBP13.7□□□□□ -0.22
COPB1-204ENST00000526191 PLA2G2EQ9NZK7 142 aa13.7□□□□□ -0.22
COPB1-204ENST00000526191 OATP04181 439 aa13.69□□□□□ -0.22
COPB1-204ENST00000526191 PPP4CP60510 307 aa13.69□□□□□ -0.22
COPB1-204ENST00000526191 TMEM134Q9H6X4 195 aa13.68□□□□□ -0.22
COPB1-204ENST00000526191 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.65□□□□□ -0.22
COPB1-204ENST00000526191 NYAP1Q6ZVC0 841 aa13.65□□□□□ -0.22
COPB1-204ENST00000526191 SLF2Q8IX21 1173 aa13.65□□□□□ -0.22
COPB1-204ENST00000526191 NLRP7Q8WX94 980 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms