RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 ONECUT3O60422 494 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC4-207ENST00000526141 PHF14O94880 888 aa6.79□□□□□ -1.32
TRAPPC4-207ENST00000526141 PCDHGA10Q9Y5H3 936 aa6.79□□□□□ -1.32
TRAPPC4-207ENST00000526141 SOWAHBA6NEL2 793 aa6.78□□□□□ -1.32
TRAPPC4-207ENST00000526141 GTPBP6O43824 516 aaPredicted RBP6.78□□□□□ -1.32
TRAPPC4-207ENST00000526141 PROX2Q3B8N5 592 aa6.78□□□□□ -1.32
TRAPPC4-207ENST00000526141 COL9A1P20849 921 aa6.76□□□□□ -1.33
TRAPPC4-207ENST00000526141 KCNC4Q03721 635 aa6.76□□□□□ -1.33
TRAPPC4-207ENST00000526141 ZFRQ96KR1 1074 aaKnown RBP6.76□□□□□ -1.33
TRAPPC4-207ENST00000526141 EPAS1Q99814 870 aa6.76□□□□□ -1.33
TRAPPC4-207ENST00000526141 KIAA1468Q9P260 1216 aa6.76□□□□□ -1.33
TRAPPC4-207ENST00000526141 BCAMP50895 628 aa6.75□□□□□ -1.33
TRAPPC4-207ENST00000526141 EMILIN3Q9NT22 766 aa6.75□□□□□ -1.33
TRAPPC4-207ENST00000526141 LAPTM4AQ15012 233 aa6.73□□□□□ -1.33
TRAPPC4-207ENST00000526141 C6orf132Q5T0Z8 1188 aa6.73□□□□□ -1.33
TRAPPC4-207ENST00000526141 Q6ZNB5 142 aa6.73□□□□□ -1.33
TRAPPC4-207ENST00000526141 FAM98CQ17RN3 349 aaKnown RBP6.72□□□□□ -1.33
TRAPPC4-207ENST00000526141 AMER1Q5JTC6 1135 aaPredicted RBP6.72□□□□□ -1.33
TRAPPC4-207ENST00000526141 WBP1LQ9NX94 342 aa6.72□□□□□ -1.33
TRAPPC4-207ENST00000526141 TRIM6-TRIM34B2RNG4 842 aa6.71□□□□□ -1.34
TRAPPC4-207ENST00000526141 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.71□□□□□ -1.34
TRAPPC4-207ENST00000526141 TSR3Q9UJK0 312 aaKnown RBP6.71□□□□□ -1.34
TRAPPC4-207ENST00000526141 LRCH3Q96II8 777 aa6.7□□□□□ -1.34
TRAPPC4-207ENST00000526141 SEPT9Q9UHD8 586 aaPredicted RBP6.7□□□□□ -1.34
TRAPPC4-207ENST00000526141 CAMK2BQ13554 666 aa6.68□□□□□ -1.34
TRAPPC4-207ENST00000526141 PACS2Q86VP3 889 aa6.68□□□□□ -1.34
TRAPPC4-207ENST00000526141 RTN4Q9NQC3 1192 aaKnown RBP6.68□□□□□ -1.34
TRAPPC4-207ENST00000526141 HPS5Q9UPZ3 1129 aa6.68□□□□□ -1.34
TRAPPC4-207ENST00000526141 DPYSL4O14531 572 aa6.66□□□□□ -1.34
TRAPPC4-207ENST00000526141 DCAF8L2P0C7V8 631 aa6.66□□□□□ -1.34
TRAPPC4-207ENST00000526141 RBM33Q96EV2 1170 aaKnown RBP6.66□□□□□ -1.34
TRAPPC4-207ENST00000526141 PPP4CP60510 307 aa6.65□□□□□ -1.34
TRAPPC4-207ENST00000526141 CADPS2Q86UW7 1296 aa6.65□□□□□ -1.34
TRAPPC4-207ENST00000526141 DDX12PQ92771 950 aa6.64□□□□□ -1.35
TRAPPC4-207ENST00000526141 GFRA3O60609 400 aa6.63□□□□□ -1.35
TRAPPC4-207ENST00000526141 MAP3K7O43318 606 aa6.62□□□□□ -1.35
TRAPPC4-207ENST00000526141 EN1Q05925 392 aaPredicted RBP6.62□□□□□ -1.35
TRAPPC4-207ENST00000526141 NBR1Q14596 966 aa6.62□□□□□ -1.35
TRAPPC4-207ENST00000526141 TRAF7Q6Q0C0 670 aa6.62□□□□□ -1.35
TRAPPC4-207ENST00000526141 CERKQ8TCT0 537 aa6.62□□□□□ -1.35
TRAPPC4-207ENST00000526141 SPDYE16A6NNV3 312 aaPredicted RBP6.61□□□□□ -1.35
TRAPPC4-207ENST00000526141 TSKSQ9UJT2 592 aa6.61□□□□□ -1.35
TRAPPC4-207ENST00000526141 HDGFP51858 240 aaKnown RBP6.6□□□□□ -1.35
TRAPPC4-207ENST00000526141 TJAP1Q5JTD0 557 aa6.59□□□□□ -1.35
TRAPPC4-207ENST00000526141 CDCA7LQ96GN5 454 aa6.59□□□□□ -1.35
TRAPPC4-207ENST00000526141 IL21Q9HBE4 155 aa6.59□□□□□ -1.35
TRAPPC4-207ENST00000526141 V9GY48 417 aaPredicted RBP6.59□□□□□ -1.35
TRAPPC4-207ENST00000526141 NRG2O14511 850 aaPredicted RBP6.58□□□□□ -1.36
TRAPPC4-207ENST00000526141 PRSS12P56730 875 aa6.58□□□□□ -1.36
TRAPPC4-207ENST00000526141 PDIA6Q15084 440 aa6.58□□□□□ -1.36
TRAPPC4-207ENST00000526141 TSR1Q2NL82 804 aaKnown RBP6.58□□□□□ -1.36
TRAPPC4-207ENST00000526141 SAMD7Q7Z3H4 446 aa6.58□□□□□ -1.36
TRAPPC4-207ENST00000526141 NECTIN2Q92692 538 aa6.58□□□□□ -1.36
TRAPPC4-207ENST00000526141 PRKD2Q9BZL6 878 aa6.58□□□□□ -1.36
TRAPPC4-207ENST00000526141 NBPF26B4DH59 902 aa6.57□□□□□ -1.36
TRAPPC4-207ENST00000526141 TATDN2Q93075 761 aa6.56□□□□□ -1.36
TRAPPC4-207ENST00000526141 MTRQ99707 1265 aa6.56□□□□□ -1.36
TRAPPC4-207ENST00000526141 PPP1R18Q6NYC8 613 aa6.55□□□□□ -1.36
TRAPPC4-207ENST00000526141 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.55□□□□□ -1.36
TRAPPC4-207ENST00000526141 PNMA3Q9UL41 463 aa6.55□□□□□ -1.36
TRAPPC4-207ENST00000526141 SMAPO00193 183 aa6.54□□□□□ -1.36
TRAPPC4-207ENST00000526141 GGCXP38435 758 aa6.54□□□□□ -1.36
TRAPPC4-207ENST00000526141 RBM27Q9P2N5 1060 aaKnown RBP6.53□□□□□ -1.36
TRAPPC4-207ENST00000526141 RNF40O75150 1001 aa6.52□□□□□ -1.37
TRAPPC4-207ENST00000526141 SLC4A3P48751 1232 aa6.52□□□□□ -1.37
TRAPPC4-207ENST00000526141 GRXCR2A6NFK2 248 aa6.51□□□□□ -1.37
TRAPPC4-207ENST00000526141 LCE2BO14633 110 aa6.51□□□□□ -1.37
TRAPPC4-207ENST00000526141 E2F4Q16254 413 aa6.51□□□□□ -1.37
TRAPPC4-207ENST00000526141 NUDT18Q6ZVK8 323 aa6.51□□□□□ -1.37
TRAPPC4-207ENST00000526141 BBXQ8WY36 941 aaPredicted RBP6.51□□□□□ -1.37
TRAPPC4-207ENST00000526141 FAM198AQ9UFP1 575 aa6.51□□□□□ -1.37
TRAPPC4-207ENST00000526141 PDZRN3Q9UPQ7 1066 aa6.51□□□□□ -1.37
TRAPPC4-207ENST00000526141 ARIH1Q9Y4X5 557 aaPredicted RBP6.51□□□□□ -1.37
TRAPPC4-207ENST00000526141 ZNF516Q92618 1163 aa6.5□□□□□ -1.37
TRAPPC4-207ENST00000526141 TMUB1Q9BVT8 246 aa6.5□□□□□ -1.37
TRAPPC4-207ENST00000526141 APLP1P51693 650 aa6.49□□□□□ -1.37
TRAPPC4-207ENST00000526141 ZNF787Q6DD87 383 aa6.49□□□□□ -1.37
TRAPPC4-207ENST00000526141 SLF2Q8IX21 1173 aa6.49□□□□□ -1.37
TRAPPC4-207ENST00000526141 PRR14Q9BWN1 585 aa6.49□□□□□ -1.37
TRAPPC4-207ENST00000526141 WDR70Q9NW82 654 aa6.49□□□□□ -1.37
TRAPPC4-207ENST00000526141 SPRYD3Q8NCJ5 442 aa6.47□□□□□ -1.37
TRAPPC4-207ENST00000526141 C3orf80F5H4A9 247 aa6.46□□□□□ -1.38
TRAPPC4-207ENST00000526141 OSBPP22059 807 aa6.46□□□□□ -1.38
TRAPPC4-207ENST00000526141 PRIM1P49642 420 aaKnown RBP6.45□□□□□ -1.38
TRAPPC4-207ENST00000526141 SWT1Q5T5J6 900 aaKnown RBP6.45□□□□□ -1.38
TRAPPC4-207ENST00000526141 NKX2-3Q8TAU0 364 aa6.45□□□□□ -1.38
TRAPPC4-207ENST00000526141 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.45□□□□□ -1.38
TRAPPC4-207ENST00000526141 ZPR1O75312 459 aa6.44□□□□□ -1.38
TRAPPC4-207ENST00000526141 COPS2P61201 443 aa6.44□□□□□ -1.38
TRAPPC4-207ENST00000526141 TTC13Q8NBP0 860 aa6.43□□□□□ -1.38
TRAPPC4-207ENST00000526141 CDHR5Q9HBB8 845 aa6.43□□□□□ -1.38
TRAPPC4-207ENST00000526141 PADI6Q6TGC4 694 aa6.42□□□□□ -1.38
TRAPPC4-207ENST00000526141 PCDHB3Q9Y5E6 796 aa6.42□□□□□ -1.38
TRAPPC4-207ENST00000526141 SLC19A1P41440 591 aa6.41□□□□□ -1.38
TRAPPC4-207ENST00000526141 PKDCCQ504Y2 493 aa6.41□□□□□ -1.38
TRAPPC4-207ENST00000526141 ZNF775Q96BV0 537 aaPredicted RBP6.4□□□□□ -1.38
TRAPPC4-207ENST00000526141 NPDC1Q9NQX5 325 aaPredicted RBP6.4□□□□□ -1.38
TRAPPC4-207ENST00000526141 DGAT1O75907 488 aa6.39□□□□□ -1.39
TRAPPC4-207ENST00000526141 EYA1Q99502 592 aa6.39□□□□□ -1.39
TRAPPC4-207ENST00000526141 RNF223E7ERA6 249 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms