RNA–Protein interactions for RNA: ENST00000525745.5

ECHDC1-218, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-218ENST00000525745 RBM33Q96EV2 1170 aaKnown RBP7.3□□□□□ -1.24
ECHDC1-218ENST00000525745 EPAS1Q99814 870 aa7.3□□□□□ -1.24
ECHDC1-218ENST00000525745 HCSTQ9UBK5 93 aa7.3□□□□□ -1.24
ECHDC1-218ENST00000525745 COL9A1P20849 921 aa7.29□□□□□ -1.24
ECHDC1-218ENST00000525745 GOLGA8CPA6NN73 597 aa7.28□□□□□ -1.24
ECHDC1-218ENST00000525745 NBR1Q14596 966 aa7.28□□□□□ -1.24
ECHDC1-218ENST00000525745 PROX2Q3B8N5 592 aa7.28□□□□□ -1.24
ECHDC1-218ENST00000525745 MRPL50Q8N5N7 158 aaKnown RBP7.28□□□□□ -1.24
ECHDC1-218ENST00000525745 TSHZ2Q9NRE2 1034 aa7.28□□□□□ -1.24
ECHDC1-218ENST00000525745 SPDYE16A6NNV3 312 aaPredicted RBP7.27□□□□□ -1.25
ECHDC1-218ENST00000525745 C6orf132Q5T0Z8 1188 aa7.27□□□□□ -1.25
ECHDC1-218ENST00000525745 NBPF3Q9H094 633 aa7.27□□□□□ -1.25
ECHDC1-218ENST00000525745 BHMG1C9JSJ3 638 aaPredicted RBP7.26□□□□□ -1.25
ECHDC1-218ENST00000525745 MAP3K7O43318 606 aa7.25□□□□□ -1.25
ECHDC1-218ENST00000525745 PTPN5P54829 565 aa7.25□□□□□ -1.25
ECHDC1-218ENST00000525745 GRXCR2A6NFK2 248 aa7.24□□□□□ -1.25
ECHDC1-218ENST00000525745 EN1Q05925 392 aaPredicted RBP7.24□□□□□ -1.25
ECHDC1-218ENST00000525745 WNT2BQ93097 391 aa7.24□□□□□ -1.25
ECHDC1-218ENST00000525745 RABGEF1Q9UJ41 708 aa7.24□□□□□ -1.25
ECHDC1-218ENST00000525745 TSR1Q2NL82 804 aaKnown RBP7.23□□□□□ -1.25
ECHDC1-218ENST00000525745 PLA2G2EQ9NZK7 142 aa7.23□□□□□ -1.25
ECHDC1-218ENST00000525745 ARIH1Q9Y4X5 557 aaPredicted RBP7.23□□□□□ -1.25
ECHDC1-218ENST00000525745 THSD4Q6ZMP0 1018 aa7.22□□□□□ -1.25
ECHDC1-218ENST00000525745 KIAA1468Q9P260 1216 aa7.22□□□□□ -1.25
ECHDC1-218ENST00000525745 TRIM6-TRIM34B2RNG4 842 aa7.2□□□□□ -1.26
ECHDC1-218ENST00000525745 SEPT9Q9UHD8 586 aaPredicted RBP7.2□□□□□ -1.26
ECHDC1-218ENST00000525745 PRIM1P49642 420 aaKnown RBP7.19□□□□□ -1.26
ECHDC1-218ENST00000525745 ANKK1Q8NFD2 765 aa7.19□□□□□ -1.26
ECHDC1-218ENST00000525745 ONECUT3O60422 494 aaPredicted RBP7.18□□□□□ -1.26
ECHDC1-218ENST00000525745 LAPTM4BQ86VI4 370 aa7.17□□□□□ -1.26
ECHDC1-218ENST00000525745 KCNV2Q8TDN2 545 aa7.17□□□□□ -1.26
ECHDC1-218ENST00000525745 OSBPP22059 807 aa7.16□□□□□ -1.26
ECHDC1-218ENST00000525745 BCAMP50895 628 aa7.16□□□□□ -1.26
ECHDC1-218ENST00000525745 ARHGEF1Q92888 912 aaKnown RBP7.16□□□□□ -1.26
ECHDC1-218ENST00000525745 ZFRQ96KR1 1074 aaKnown RBP7.16□□□□□ -1.26
ECHDC1-218ENST00000525745 TSKSQ9UJT2 592 aa7.16□□□□□ -1.26
ECHDC1-218ENST00000525745 PLCB2Q00722 1185 aa7.15□□□□□ -1.26
ECHDC1-218ENST00000525745 PACS2Q86VP3 889 aa7.15□□□□□ -1.26
ECHDC1-218ENST00000525745 CDCA7LQ96GN5 454 aa7.15□□□□□ -1.26
ECHDC1-218ENST00000525745 CDHR5Q9HBB8 845 aa7.15□□□□□ -1.26
ECHDC1-218ENST00000525745 PRSS12P56730 875 aa7.14□□□□□ -1.27
ECHDC1-218ENST00000525745 FAM98CQ17RN3 349 aaKnown RBP7.14□□□□□ -1.27
ECHDC1-218ENST00000525745 CERKQ8TCT0 537 aa7.14□□□□□ -1.27
ECHDC1-218ENST00000525745 SOWAHBA6NEL2 793 aa7.13□□□□□ -1.27
ECHDC1-218ENST00000525745 SMAPO00193 183 aa7.13□□□□□ -1.27
ECHDC1-218ENST00000525745 MLLT3P42568 568 aaPredicted RBP7.12□□□□□ -1.27
ECHDC1-218ENST00000525745 P3H3Q8IVL6 736 aa7.11□□□□□ -1.27
ECHDC1-218ENST00000525745 LRCH3Q96II8 777 aa7.11□□□□□ -1.27
ECHDC1-218ENST00000525745 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.11□□□□□ -1.27
ECHDC1-218ENST00000525745 FAM198AQ9UFP1 575 aa7.11□□□□□ -1.27
ECHDC1-218ENST00000525745 NBPF26B4DH59 902 aa7.1□□□□□ -1.27
ECHDC1-218ENST00000525745 WBP1LQ9NX94 342 aa7.1□□□□□ -1.27
ECHDC1-218ENST00000525745 PNMA3Q9UL41 463 aa7.1□□□□□ -1.27
ECHDC1-218ENST00000525745 TATDN2Q93075 761 aa7.09□□□□□ -1.27
ECHDC1-218ENST00000525745 HPS5Q9UPZ3 1129 aa7.09□□□□□ -1.27
ECHDC1-218ENST00000525745 C3orf80F5H4A9 247 aa7.08□□□□□ -1.28
ECHDC1-218ENST00000525745 HAP1P54257 671 aaPredicted RBP7.08□□□□□ -1.28
ECHDC1-218ENST00000525745 PADI6Q6TGC4 694 aa7.08□□□□□ -1.28
ECHDC1-218ENST00000525745 NUDT18Q6ZVK8 323 aa7.08□□□□□ -1.28
ECHDC1-218ENST00000525745 NYAP1Q6ZVC0 841 aa7.07□□□□□ -1.28
ECHDC1-218ENST00000525745 SAMD7Q7Z3H4 446 aa7.07□□□□□ -1.28
ECHDC1-218ENST00000525745 NPDC1Q9NQX5 325 aaPredicted RBP7.07□□□□□ -1.28
ECHDC1-218ENST00000525745 RBM27Q9P2N5 1060 aaKnown RBP7.07□□□□□ -1.28
ECHDC1-218ENST00000525745 TSR3Q9UJK0 312 aaKnown RBP7.07□□□□□ -1.28
ECHDC1-218ENST00000525745 SEMA3EO15041 775 aa7.05□□□□□ -1.28
ECHDC1-218ENST00000525745 RNF40O75150 1001 aa7.05□□□□□ -1.28
ECHDC1-218ENST00000525745 PPP4CP60510 307 aa7.05□□□□□ -1.28
ECHDC1-218ENST00000525745 NUTM2FA1L443 756 aa7.04□□□□□ -1.28
ECHDC1-218ENST00000525745 IFFO2Q5TF58 517 aa7.04□□□□□ -1.28
ECHDC1-218ENST00000525745 HDGFP51858 240 aaKnown RBP7.03□□□□□ -1.28
ECHDC1-218ENST00000525745 TTC13Q8NBP0 860 aa7.03□□□□□ -1.28
ECHDC1-218ENST00000525745 A0A0G2JS52 829 aa7.02□□□□□ -1.29
ECHDC1-218ENST00000525745 ITGBL1O95965 494 aaPredicted RBP7.02□□□□□ -1.29
ECHDC1-218ENST00000525745 PTGDRQ13258 359 aa7.02□□□□□ -1.29
ECHDC1-218ENST00000525745 KCNC4Q03721 635 aa7.01□□□□□ -1.29
ECHDC1-218ENST00000525745 SWT1Q5T5J6 900 aaKnown RBP7□□□□□ -1.29
ECHDC1-218ENST00000525745 EYA1Q99502 592 aa6.98□□□□□ -1.29
ECHDC1-218ENST00000525745 TESPA1A2RU30 521 aaPredicted RBP6.97□□□□□ -1.29
ECHDC1-218ENST00000525745 FCHSD2O94868 740 aa6.97□□□□□ -1.29
ECHDC1-218ENST00000525745 SLC4A3P48751 1232 aa6.97□□□□□ -1.29
ECHDC1-218ENST00000525745 FAM161AQ3B820 660 aa6.97□□□□□ -1.29
ECHDC1-218ENST00000525745 SLF2Q8IX21 1173 aa6.97□□□□□ -1.29
ECHDC1-218ENST00000525745 KDM2AQ9Y2K7 1162 aa6.97□□□□□ -1.29
ECHDC1-218ENST00000525745 RBM26Q5T8P6 1007 aaKnown RBP6.96□□□□□ -1.3
ECHDC1-218ENST00000525745 SMYD5Q6GMV2 418 aa6.96□□□□□ -1.3
ECHDC1-218ENST00000525745 RBM46Q8TBY0 533 aaKnown RBP6.96□□□□□ -1.3
ECHDC1-218ENST00000525745 APLP1P51693 650 aa6.95□□□□□ -1.3
ECHDC1-218ENST00000525745 NECTIN2Q92692 538 aa6.95□□□□□ -1.3
ECHDC1-218ENST00000525745 MTRQ99707 1265 aa6.95□□□□□ -1.3
ECHDC1-218ENST00000525745 ADGRG1Q9Y653 693 aa6.95□□□□□ -1.3
ECHDC1-218ENST00000525745 RGS20O76081 388 aa6.94□□□□□ -1.3
ECHDC1-218ENST00000525745 DNAJB2P25686 324 aa6.94□□□□□ -1.3
ECHDC1-218ENST00000525745 TJAP1Q5JTD0 557 aa6.94□□□□□ -1.3
ECHDC1-218ENST00000525745 IL21Q9HBE4 155 aa6.93□□□□□ -1.3
ECHDC1-218ENST00000525745 RCCD1A6NED2 376 aa6.92□□□□□ -1.3
ECHDC1-218ENST00000525745 HIC1Q14526 733 aa6.92□□□□□ -1.3
ECHDC1-218ENST00000525745 TMEM134Q9H6X4 195 aa6.92□□□□□ -1.3
ECHDC1-218ENST00000525745 COPS2P61201 443 aa6.91□□□□□ -1.3
ECHDC1-218ENST00000525745 ZNF516Q92618 1163 aa6.91□□□□□ -1.3
ECHDC1-218ENST00000525745 VSIG10Q8N0Z9 540 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms