RNA–Protein interactions for RNA: ENST00000525549.5

MS4A6A-204, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 4

Gene MS4A6A, Length 552 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-204ENST00000525549 RNF166Q96A37 237 aaPredicted RBP10.35□□□□□ -0.75
MS4A6A-204ENST00000525549 NBR1Q14596 966 aa10.33□□□□□ -0.76
MS4A6A-204ENST00000525549 SLC4A5Q9BY07 1137 aa10.33□□□□□ -0.76
MS4A6A-204ENST00000525549 VPS9D1Q9Y2B5 631 aa10.33□□□□□ -0.76
MS4A6A-204ENST00000525549 HRO43593 1189 aa10.32□□□□□ -0.76
MS4A6A-204ENST00000525549 P3H3Q8IVL6 736 aa10.32□□□□□ -0.76
MS4A6A-204ENST00000525549 RBM33Q96EV2 1170 aaKnown RBP10.32□□□□□ -0.76
MS4A6A-204ENST00000525549 ZBED2Q9BTP6 218 aa10.32□□□□□ -0.76
MS4A6A-204ENST00000525549 GRXCR2A6NFK2 248 aa10.31□□□□□ -0.76
MS4A6A-204ENST00000525549 PPP1R3GB7ZBB8 358 aa10.31□□□□□ -0.76
MS4A6A-204ENST00000525549 C6orf132Q5T0Z8 1188 aa10.31□□□□□ -0.76
MS4A6A-204ENST00000525549 COL9A1P20849 921 aa10.29□□□□□ -0.76
MS4A6A-204ENST00000525549 EN1Q05925 392 aaPredicted RBP10.29□□□□□ -0.76
MS4A6A-204ENST00000525549 STAC3Q96MF2 364 aa10.29□□□□□ -0.76
MS4A6A-204ENST00000525549 MAP3K7O43318 606 aa10.28□□□□□ -0.76
MS4A6A-204ENST00000525549 OSBPP22059 807 aa10.25□□□□□ -0.77
MS4A6A-204ENST00000525549 BHMG1C9JSJ3 638 aaPredicted RBP10.24□□□□□ -0.77
MS4A6A-204ENST00000525549 TSR1Q2NL82 804 aaKnown RBP10.24□□□□□ -0.77
MS4A6A-204ENST00000525549 PROX2Q3B8N5 592 aa10.24□□□□□ -0.77
MS4A6A-204ENST00000525549 KDM2AQ9Y2K7 1162 aa10.24□□□□□ -0.77
MS4A6A-204ENST00000525549 PRIM1P49642 420 aaKnown RBP10.23□□□□□ -0.77
MS4A6A-204ENST00000525549 NBPF3Q9H094 633 aa10.22□□□□□ -0.77
MS4A6A-204ENST00000525549 MLLT3P42568 568 aaPredicted RBP10.21□□□□□ -0.77
MS4A6A-204ENST00000525549 VSIG10Q8N0Z9 540 aa10.21□□□□□ -0.77
MS4A6A-204ENST00000525549 RABGEF1Q9UJ41 708 aa10.21□□□□□ -0.77
MS4A6A-204ENST00000525549 ONECUT3O60422 494 aaPredicted RBP10.2□□□□□ -0.78
MS4A6A-204ENST00000525549 MRPL50Q8N5N7 158 aaKnown RBP10.2□□□□□ -0.78
MS4A6A-204ENST00000525549 TRIM6-TRIM34B2RNG4 842 aa10.18□□□□□ -0.78
MS4A6A-204ENST00000525549 CERKQ8TCT0 537 aa10.18□□□□□ -0.78
MS4A6A-204ENST00000525549 KCTD12Q96CX2 325 aaKnown RBP10.18□□□□□ -0.78
MS4A6A-204ENST00000525549 KIAA1468Q9P260 1216 aa10.18□□□□□ -0.78
MS4A6A-204ENST00000525549 GOLGA8CPA6NN73 597 aa10.17□□□□□ -0.78
MS4A6A-204ENST00000525549 SEMA3EO15041 775 aa10.16□□□□□ -0.78
MS4A6A-204ENST00000525549 CDHR5Q9HBB8 845 aa10.16□□□□□ -0.78
MS4A6A-204ENST00000525549 HCSTQ9UBK5 93 aa10.15□□□□□ -0.78
MS4A6A-204ENST00000525549 PRSS12P56730 875 aa10.14□□□□□ -0.79
MS4A6A-204ENST00000525549 CDCA7LQ96GN5 454 aa10.14□□□□□ -0.79
MS4A6A-204ENST00000525549 LAPTM4BQ86VI4 370 aa10.13□□□□□ -0.79
MS4A6A-204ENST00000525549 PACS2Q86VP3 889 aa10.13□□□□□ -0.79
MS4A6A-204ENST00000525549 WNT2BQ93097 391 aa10.13□□□□□ -0.79
MS4A6A-204ENST00000525549 TSKSQ9UJT2 592 aa10.13□□□□□ -0.79
MS4A6A-204ENST00000525549 NPDC1Q9NQX5 325 aaPredicted RBP10.11□□□□□ -0.79
MS4A6A-204ENST00000525549 SEPT9Q9UHD8 586 aaPredicted RBP10.11□□□□□ -0.79
MS4A6A-204ENST00000525549 TESPA1A2RU30 521 aaPredicted RBP10.1□□□□□ -0.79
MS4A6A-204ENST00000525549 THSD4Q6ZMP0 1018 aa10.09□□□□□ -0.79
MS4A6A-204ENST00000525549 ANKK1Q8NFD2 765 aa10.09□□□□□ -0.79
MS4A6A-204ENST00000525549 RBM27Q9P2N5 1060 aaKnown RBP10.09□□□□□ -0.79
MS4A6A-204ENST00000525549 FAM198AQ9UFP1 575 aa10.09□□□□□ -0.79
MS4A6A-204ENST00000525549 PTPN5P54829 565 aa10.08□□□□□ -0.8
MS4A6A-204ENST00000525549 FAM98CQ17RN3 349 aaKnown RBP10.08□□□□□ -0.8
MS4A6A-204ENST00000525549 SMYD5Q6GMV2 418 aa10.08□□□□□ -0.8
MS4A6A-204ENST00000525549 ZFRQ96KR1 1074 aaKnown RBP10.08□□□□□ -0.8
MS4A6A-204ENST00000525549 NUTM2FA1L443 756 aa10.06□□□□□ -0.8
MS4A6A-204ENST00000525549 NBPF26B4DH59 902 aa10.06□□□□□ -0.8
MS4A6A-204ENST00000525549 PADI6Q6TGC4 694 aa10.05□□□□□ -0.8
MS4A6A-204ENST00000525549 TATDN2Q93075 761 aa10.05□□□□□ -0.8
MS4A6A-204ENST00000525549 SMAPO00193 183 aa10.04□□□□□ -0.8
MS4A6A-204ENST00000525549 PTGDRQ13258 359 aa10.04□□□□□ -0.8
MS4A6A-204ENST00000525549 TTC13Q8NBP0 860 aa10.04□□□□□ -0.8
MS4A6A-204ENST00000525549 PNMA3Q9UL41 463 aa10.04□□□□□ -0.8
MS4A6A-204ENST00000525549 SOWAHBA6NEL2 793 aa10.03□□□□□ -0.8
MS4A6A-204ENST00000525549 C3orf80F5H4A9 247 aa10.02□□□□□ -0.81
MS4A6A-204ENST00000525549 BCAMP50895 628 aa10.02□□□□□ -0.81
MS4A6A-204ENST00000525549 NUDT18Q6ZVK8 323 aa10.02□□□□□ -0.81
MS4A6A-204ENST00000525549 FCHSD2O94868 740 aa10.01□□□□□ -0.81
MS4A6A-204ENST00000525549 RBM26Q5T8P6 1007 aaKnown RBP10.01□□□□□ -0.81
MS4A6A-204ENST00000525549 LRCH3Q96II8 777 aa10□□□□□ -0.81
MS4A6A-204ENST00000525549 CDKN2AIPQ9NXV6 580 aaPredicted RBP10□□□□□ -0.81
MS4A6A-204ENST00000525549 SAMD7Q7Z3H4 446 aa9.97□□□□□ -0.81
MS4A6A-204ENST00000525549 PLA2G2EQ9NZK7 142 aa9.97□□□□□ -0.81
MS4A6A-204ENST00000525549 HDGFP51858 240 aaKnown RBP9.95□□□□□ -0.82
MS4A6A-204ENST00000525549 HIC1Q14526 733 aa9.95□□□□□ -0.82
MS4A6A-204ENST00000525549 WBP1LQ9NX94 342 aa9.95□□□□□ -0.82
MS4A6A-204ENST00000525549 TSR3Q9UJK0 312 aaKnown RBP9.95□□□□□ -0.82
MS4A6A-204ENST00000525549 HPS5Q9UPZ3 1129 aa9.95□□□□□ -0.82
MS4A6A-204ENST00000525549 TULP1O00294 542 aaPredicted RBP9.94□□□□□ -0.82
MS4A6A-204ENST00000525549 NYAP1Q6ZVC0 841 aa9.94□□□□□ -0.82
MS4A6A-204ENST00000525549 EYA1Q99502 592 aa9.94□□□□□ -0.82
MS4A6A-204ENST00000525549 ADGRG1Q9Y653 693 aa9.93□□□□□ -0.82
MS4A6A-204ENST00000525549 RBM46Q8TBY0 533 aaKnown RBP9.92□□□□□ -0.82
MS4A6A-204ENST00000525549 PPP4CP60510 307 aa9.91□□□□□ -0.82
MS4A6A-204ENST00000525549 GNPATO15228 680 aa9.9□□□□□ -0.82
MS4A6A-204ENST00000525549 GPR37O15354 613 aa9.9□□□□□ -0.82
MS4A6A-204ENST00000525549 FAM161AQ3B820 660 aa9.9□□□□□ -0.82
MS4A6A-204ENST00000525549 GPIHBP1Q8IV16 184 aa9.9□□□□□ -0.82
MS4A6A-204ENST00000525549 RNF40O75150 1001 aa9.89□□□□□ -0.83
MS4A6A-204ENST00000525549 SWT1Q5T5J6 900 aaKnown RBP9.89□□□□□ -0.83
MS4A6A-204ENST00000525549 DNAJB2P25686 324 aa9.88□□□□□ -0.83
MS4A6A-204ENST00000525549 OATP04181 439 aa9.87□□□□□ -0.83
MS4A6A-204ENST00000525549 SLF2Q8IX21 1173 aa9.87□□□□□ -0.83
MS4A6A-204ENST00000525549 FECHP22830 423 aa9.86□□□□□ -0.83
MS4A6A-204ENST00000525549 SLC4A3P48751 1232 aa9.86□□□□□ -0.83
MS4A6A-204ENST00000525549 RCCD1A6NED2 376 aa9.85□□□□□ -0.83
MS4A6A-204ENST00000525549 IFFO2Q5TF58 517 aa9.85□□□□□ -0.83
MS4A6A-204ENST00000525549 NECTIN2Q92692 538 aa9.85□□□□□ -0.83
MS4A6A-204ENST00000525549 ITGBL1O95965 494 aaPredicted RBP9.84□□□□□ -0.83
MS4A6A-204ENST00000525549 PXYLP1Q8TE99 480 aa9.84□□□□□ -0.83
MS4A6A-204ENST00000525549 TMEM134Q9H6X4 195 aa9.84□□□□□ -0.83
MS4A6A-204ENST00000525549 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.83□□□□□ -0.84
MS4A6A-204ENST00000525549 METTL3Q86U44 580 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms