RNA–Protein interactions for RNA: ENST00000525508.1

CHD7-203, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 5 BASIC

Gene CHD7, Length 4,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-203ENST00000525508 FOXD4L1Q9NU39 408 aa10.53□□□□□ -0.72
CHD7-203ENST00000525508 FAM69CQ0P6D2 419 aa10.52□□□□□ -0.73
CHD7-203ENST00000525508 NECTIN2Q92692 538 aa10.52□□□□□ -0.73
CHD7-203ENST00000525508 NGEFQ8N5V2 710 aa10.51□□□□□ -0.73
CHD7-203ENST00000525508 RWDD1Q9H446 243 aaPredicted RBP10.51□□□□□ -0.73
CHD7-203ENST00000525508 GOLGA6L4A6NEF3 574 aa10.5□□□□□ -0.73
CHD7-203ENST00000525508 CENPJQ9HC77 1338 aaPredicted RBP10.5□□□□□ -0.73
CHD7-203ENST00000525508 TRIM6-TRIM34B2RNG4 842 aa10.5□□□□□ -0.73
CHD7-203ENST00000525508 USP47Q96K76 1375 aa10.5□□□□□ -0.73
CHD7-203ENST00000525508 GAPVD1Q14C86 1478 aa10.5□□□□□ -0.73
CHD7-203ENST00000525508 PHLDB1Q86UU1 1377 aa10.5□□□□□ -0.73
CHD7-203ENST00000525508 VGFO15240 615 aaPredicted RBP10.49□□□□□ -0.73
CHD7-203ENST00000525508 SLC4A3P48751 1232 aa10.49□□□□□ -0.73
CHD7-203ENST00000525508 EIF3AQ14152 1382 aaKnown RBP10.49□□□□□ -0.73
CHD7-203ENST00000525508 NUTM2GQ5VZR2 741 aa10.49□□□□□ -0.73
CHD7-203ENST00000525508 EXOC6Q8TAG9 804 aa10.49□□□□□ -0.73
CHD7-203ENST00000525508 COG6Q9Y2V7 657 aa10.49□□□□□ -0.73
CHD7-203ENST00000525508 KIAA1211Q6ZU35 1233 aa10.48□□□□□ -0.73
CHD7-203ENST00000525508 DNAJC5BQ9UF47 199 aa10.48□□□□□ -0.73
CHD7-203ENST00000525508 CALD1Q05682 793 aaKnown RBP10.47□□□□□ -0.73
CHD7-203ENST00000525508 GORABQ5T7V8 394 aa10.47□□□□□ -0.73
CHD7-203ENST00000525508 MYBBP1AQ9BQG0 1328 aaKnown RBP10.47□□□□□ -0.73
CHD7-203ENST00000525508 GGNBP2Q9H3C7 697 aa10.46□□□□□ -0.73
CHD7-203ENST00000525508 EIF2S2P20042 333 aaKnown RBP10.46□□□□□ -0.74
CHD7-203ENST00000525508 FOXD4L5Q5VV16 416 aaPredicted RBP10.46□□□□□ -0.74
CHD7-203ENST00000525508 FOXD4L4Q8WXT5 416 aaPredicted RBP10.46□□□□□ -0.74
CHD7-203ENST00000525508 COG3Q96JB2 828 aa10.46□□□□□ -0.74
CHD7-203ENST00000525508 MCCP23508 829 aa10.46□□□□□ -0.74
CHD7-203ENST00000525508 NAP1L5Q96NT1 182 aaPredicted RBP10.46□□□□□ -0.74
CHD7-203ENST00000525508 HMOX1P09601 288 aa10.45□□□□□ -0.74
CHD7-203ENST00000525508 TAF7LQ5H9L4 462 aa10.45□□□□□ -0.74
CHD7-203ENST00000525508 KIF15Q9NS87 1388 aa10.45□□□□□ -0.74
CHD7-203ENST00000525508 NESP48681 1621 aa10.44□□□□□ -0.74
CHD7-203ENST00000525508 CFAP70Q5T0N1 1121 aa10.44□□□□□ -0.74
CHD7-203ENST00000525508 CRBNQ96SW2 442 aa10.44□□□□□ -0.74
CHD7-203ENST00000525508 CABP2Q9NPB3 220 aa10.44□□□□□ -0.74
CHD7-203ENST00000525508 EVC2Q86UK5 1308 aa10.44□□□□□ -0.74
CHD7-203ENST00000525508 FOXD4L6Q3SYB3 417 aaPredicted RBP10.44□□□□□ -0.74
CHD7-203ENST00000525508 FOXD4L3Q6VB84 417 aaPredicted RBP10.44□□□□□ -0.74
CHD7-203ENST00000525508 CGNL1Q0VF96 1302 aa10.43□□□□□ -0.74
CHD7-203ENST00000525508 GTF2E1P29083 439 aaPredicted RBP10.43□□□□□ -0.74
CHD7-203ENST00000525508 NBPF1Q3BBV0 1214 aa10.43□□□□□ -0.74
CHD7-203ENST00000525508 KIF7Q2M1P5 1343 aa10.43□□□□□ -0.74
CHD7-203ENST00000525508 ERICH6BQ5W0A0 696 aa10.43□□□□□ -0.74
CHD7-203ENST00000525508 ANKRD45Q5TZF3 282 aa10.42□□□□□ -0.74
CHD7-203ENST00000525508 PMFBP1Q8TBY8 1022 aa10.42□□□□□ -0.74
CHD7-203ENST00000525508 SYTL4Q96C24 671 aaPredicted RBP10.42□□□□□ -0.74
CHD7-203ENST00000525508 FGD6Q6ZV73 1430 aa10.41□□□□□ -0.74
CHD7-203ENST00000525508 TEFQ10587 303 aa10.41□□□□□ -0.74
CHD7-203ENST00000525508 GNL2Q13823 731 aaKnown RBP10.41□□□□□ -0.74
CHD7-203ENST00000525508 RIPK4P57078 832 aa10.41□□□□□ -0.74
CHD7-203ENST00000525508 PDE3BQ13370 1112 aa10.41□□□□□ -0.74
CHD7-203ENST00000525508 RILPL2Q969X0 211 aa10.41□□□□□ -0.74
CHD7-203ENST00000525508 ZNF428Q96B54 188 aa10.41□□□□□ -0.74
CHD7-203ENST00000525508 NCBP3Q53F19 620 aaKnown RBP10.4□□□□□ -0.74
CHD7-203ENST00000525508 PSME1Q06323 249 aa10.4□□□□□ -0.74
CHD7-203ENST00000525508 TOMM22Q9NS69 142 aa10.4□□□□□ -0.74
CHD7-203ENST00000525508 HMMRO75330 724 aa10.39□□□□□ -0.75
CHD7-203ENST00000525508 FRAT2O75474 233 aaPredicted RBP10.39□□□□□ -0.75
CHD7-203ENST00000525508 EVA1CP58658 441 aa10.39□□□□□ -0.75
CHD7-203ENST00000525508 MYOM3Q5VTT5 1437 aa10.39□□□□□ -0.75
CHD7-203ENST00000525508 DIAPH1O60610 1272 aaKnown RBP10.39□□□□□ -0.75
CHD7-203ENST00000525508 USP35Q9P2H5 1018 aa10.39□□□□□ -0.75
CHD7-203ENST00000525508 RRP1P56182 461 aaKnown RBP10.39□□□□□ -0.75
CHD7-203ENST00000525508 CDCA7LQ96GN5 454 aa10.39□□□□□ -0.75
CHD7-203ENST00000525508 LMOD3Q0VAK6 560 aa10.38□□□□□ -0.75
CHD7-203ENST00000525508 WASHC2AQ641Q2 1341 aa10.38□□□□□ -0.75
CHD7-203ENST00000525508 DRC7Q8IY82 874 aa10.38□□□□□ -0.75
CHD7-203ENST00000525508 ANKRD50Q9ULJ7 1429 aa10.38□□□□□ -0.75
CHD7-203ENST00000525508 CLSTN1O94985 981 aa10.38□□□□□ -0.75
CHD7-203ENST00000525508 RAPGEF3O95398 923 aa10.38□□□□□ -0.75
CHD7-203ENST00000525508 ARAP1Q96P48 1450 aa10.38□□□□□ -0.75
CHD7-203ENST00000525508 ZKSCAN2Q63HK3 967 aa10.37□□□□□ -0.75
CHD7-203ENST00000525508 ARID3AQ99856 593 aa10.37□□□□□ -0.75
CHD7-203ENST00000525508 C1orf141Q5JVX7 400 aa10.37□□□□□ -0.75
CHD7-203ENST00000525508 ADAMTS8Q9UP79 889 aa10.37□□□□□ -0.75
CHD7-203ENST00000525508 MTHFSP49914 203 aa10.37□□□□□ -0.75
CHD7-203ENST00000525508 IPO9Q96P70 1041 aaKnown RBP10.37□□□□□ -0.75
CHD7-203ENST00000525508 KIF21BO75037 1637 aa10.36□□□□□ -0.75
CHD7-203ENST00000525508 E9PSI1 815 aa10.36□□□□□ -0.75
CHD7-203ENST00000525508 PDE4AP27815 886 aa10.36□□□□□ -0.75
CHD7-203ENST00000525508 HSP90B1P14625 803 aaKnown RBP10.36□□□□□ -0.75
CHD7-203ENST00000525508 NBPF8Q3BBV2 869 aa10.36□□□□□ -0.75
CHD7-203ENST00000525508 SLC12A5Q9H2X9 1139 aa10.36□□□□□ -0.75
CHD7-203ENST00000525508 ZBED9Q6R2W3 1325 aa10.36□□□□□ -0.75
CHD7-203ENST00000525508 CFTRP13569 1480 aa10.35□□□□□ -0.75
CHD7-203ENST00000525508 NLRP6P59044 892 aa10.35□□□□□ -0.75
CHD7-203ENST00000525508 PANK1Q8TE04 598 aa10.35□□□□□ -0.75
CHD7-203ENST00000525508 CCDC7Q96M83 1385 aa10.35□□□□□ -0.75
CHD7-203ENST00000525508 LRRC9Q6ZRR7 1453 aa10.35□□□□□ -0.75
CHD7-203ENST00000525508 FKBP5Q13451 457 aaPredicted RBP10.35□□□□□ -0.75
CHD7-203ENST00000525508 MSH5O43196 834 aa10.34□□□□□ -0.75
CHD7-203ENST00000525508 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.34□□□□□ -0.75
CHD7-203ENST00000525508 PRDM2Q13029 1718 aa10.34□□□□□ -0.75
CHD7-203ENST00000525508 TXNDC2Q86VQ3 553 aa10.34□□□□□ -0.75
CHD7-203ENST00000525508 C9orf78Q9NZ63 289 aaPredicted RBP10.34□□□□□ -0.75
CHD7-203ENST00000525508 NCAPD3P42695 1498 aa10.34□□□□□ -0.75
CHD7-203ENST00000525508 NCOA2Q15596 1464 aa10.34□□□□□ -0.75
CHD7-203ENST00000525508 AIMP1Q12904 312 aaKnown RBP10.34□□□□□ -0.75
CHD7-203ENST00000525508 GBP4Q96PP9 640 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms