RNA–Protein interactions for RNA: ENST00000525148.1

NPAS4-203, Transcript of neuronal PAS domain protein 4, humanhuman

TSL 1 (best)

Gene NPAS4, Length 2,454 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-203ENST00000525148 RGL3Q3MIN7 710 aa23.8■■□□□ 1.4
NPAS4-203ENST00000525148 SPAG9O60271 1321 aaKnown RBP23.8■■□□□ 1.4
NPAS4-203ENST00000525148 CARD11Q9BXL7 1154 aa23.79■■□□□ 1.4
NPAS4-203ENST00000525148 MAGI2Q86UL8 1455 aa23.79■■□□□ 1.4
NPAS4-203ENST00000525148 PRKRIP1Q9H875 184 aaPredicted RBP23.78■■□□□ 1.4
NPAS4-203ENST00000525148 POLR1AO95602 1720 aaPredicted RBP23.78■■□□□ 1.4
NPAS4-203ENST00000525148 ARAP3Q8WWN8 1544 aa23.77■■□□□ 1.4
NPAS4-203ENST00000525148 ASXL2Q76L83 1435 aa23.77■■□□□ 1.4
NPAS4-203ENST00000525148 POLR3GLQ9BT43 218 aa23.77■■□□□ 1.4
NPAS4-203ENST00000525148 OSCARQ8IYS5 282 aa23.77■■□□□ 1.4
NPAS4-203ENST00000525148 FANCAO15360 1455 aa23.76■■□□□ 1.39
NPAS4-203ENST00000525148 ZFYVE16Q7Z3T8 1539 aa23.76■■□□□ 1.39
NPAS4-203ENST00000525148 ABCA9Q8IUA7 1624 aa23.74■■□□□ 1.39
NPAS4-203ENST00000525148 A2MP01023 1474 aa23.73■■□□□ 1.39
NPAS4-203ENST00000525148 ST20-MTHFSA0A0A6YYL1 179 aa23.72■■□□□ 1.39
NPAS4-203ENST00000525148 RTEL1-TNFRSF6BF6WH68 1400 aa23.71■■□□□ 1.39
NPAS4-203ENST00000525148 PRAG1Q86YV5 1406 aa23.71■■□□□ 1.39
NPAS4-203ENST00000525148 DHX29Q7Z478 1369 aaKnown RBP23.7■■□□□ 1.38
NPAS4-203ENST00000525148 NBPF1Q3BBV0 1214 aa23.7■■□□□ 1.38
NPAS4-203ENST00000525148 CNGB1Q14028 1251 aaPredicted RBP23.7■■□□□ 1.38
NPAS4-203ENST00000525148 ROCK2O75116 1388 aaKnown RBP23.69■■□□□ 1.38
NPAS4-203ENST00000525148 SCAPERQ9BY12 1400 aa23.69■■□□□ 1.38
NPAS4-203ENST00000525148 HNRNPUQ00839 825 aaKnown RBP eCLIP23.68■■□□□ 1.38
NPAS4-203ENST00000525148 ADGRL1O94910 1474 aa23.67■■□□□ 1.38
NPAS4-203ENST00000525148 ATP10AO60312 1499 aa23.66■■□□□ 1.38
NPAS4-203ENST00000525148 ATP7AQ04656 1500 aa23.65■■□□□ 1.38
NPAS4-203ENST00000525148 TRPM1Q7Z4N2 1603 aa23.65■■□□□ 1.38
NPAS4-203ENST00000525148 INO80Q9ULG1 1556 aaPredicted RBP23.65■■□□□ 1.38
NPAS4-203ENST00000525148 MRS2Q9HD23 443 aa23.63■■□□□ 1.37
NPAS4-203ENST00000525148 MYT1LQ9UL68 1186 aa23.63■■□□□ 1.37
NPAS4-203ENST00000525148 E9PCH4 1651 aa23.63■■□□□ 1.37
NPAS4-203ENST00000525148 FAM9BQ8IZU0 186 aa23.61■■□□□ 1.37
NPAS4-203ENST00000525148 ARID4BQ4LE39 1312 aaPredicted RBP23.61■■□□□ 1.37
NPAS4-203ENST00000525148 KIF3BO15066 747 aa23.59■■□□□ 1.37
NPAS4-203ENST00000525148 NPM1P06748 294 aaKnown RBP eCLIP23.59■■□□□ 1.37
NPAS4-203ENST00000525148 FKBP8Q14318 412 aa23.59■■□□□ 1.37
NPAS4-203ENST00000525148 DEPDC5O75140 1603 aa23.58■■□□□ 1.36
NPAS4-203ENST00000525148 BCANQ96GW7 911 aa23.57■■□□□ 1.36
NPAS4-203ENST00000525148 GPRASP1Q5JY77 1395 aa23.56■■□□□ 1.36
NPAS4-203ENST00000525148 PTPRTO14522 1441 aa23.53■■□□□ 1.36
NPAS4-203ENST00000525148 VWDEQ8N2E2 1590 aa23.52■■□□□ 1.36
NPAS4-203ENST00000525148 TRPM2O94759 1503 aa23.52■■□□□ 1.36
NPAS4-203ENST00000525148 MROH1Q8NDA8 1641 aa23.52■■□□□ 1.36
NPAS4-203ENST00000525148 KIDINS220Q9ULH0 1771 aa23.51■■□□□ 1.35
NPAS4-203ENST00000525148 CD109Q6YHK3 1445 aa23.51■■□□□ 1.35
NPAS4-203ENST00000525148 CLTCL1P53675 1640 aa23.5■■□□□ 1.35
NPAS4-203ENST00000525148 PRDM15P57071 1507 aaPredicted RBP23.5■■□□□ 1.35
NPAS4-203ENST00000525148 TET3O43151 1660 aa23.49■■□□□ 1.35
NPAS4-203ENST00000525148 TESK2Q96S53 571 aa23.49■■□□□ 1.35
NPAS4-203ENST00000525148 SPHKAPQ2M3C7 1700 aa23.48■■□□□ 1.35
NPAS4-203ENST00000525148 KANK1Q14678 1352 aa23.47■■□□□ 1.35
NPAS4-203ENST00000525148 DISP3Q9P2K9 1392 aa23.47■■□□□ 1.35
NPAS4-203ENST00000525148 ZNF518AQ6AHZ1 1483 aa23.46■■□□□ 1.35
NPAS4-203ENST00000525148 LAMC1P11047 1609 aa23.46■■□□□ 1.35
NPAS4-203ENST00000525148 EIF2AK4Q9P2K8 1649 aaKnown RBP23.46■■□□□ 1.35
NPAS4-203ENST00000525148 PELP1Q8IZL8 1130 aaKnown RBP23.45■■□□□ 1.34
NPAS4-203ENST00000525148 UGGT1Q9NYU2 1555 aa23.45■■□□□ 1.34
NPAS4-203ENST00000525148 MADDQ8WXG6 1647 aa23.44■■□□□ 1.34
NPAS4-203ENST00000525148 POGZQ7Z3K3 1410 aa23.43■■□□□ 1.34
NPAS4-203ENST00000525148 CEP152O94986 1710 aa23.42■■□□□ 1.34
NPAS4-203ENST00000525148 RNF17Q9BXT8 1623 aaKnown RBP23.42■■□□□ 1.34
NPAS4-203ENST00000525148 COL17A1Q9UMD9 1497 aaPredicted RBP23.41■■□□□ 1.34
NPAS4-203ENST00000525148 NEFLP07196 543 aa23.4■■□□□ 1.34
NPAS4-203ENST00000525148 SENP3-EIF4A1A0A087X0R7 540 aa23.39■■□□□ 1.34
NPAS4-203ENST00000525148 FRMPD1Q5SYB0 1578 aa23.39■■□□□ 1.33
NPAS4-203ENST00000525148 RAPGEF3O95398 923 aa23.38■■□□□ 1.33
NPAS4-203ENST00000525148 ZBED9Q6R2W3 1325 aa23.37■■□□□ 1.33
NPAS4-203ENST00000525148 PPRC1Q5VV67 1664 aaKnown RBP23.37■■□□□ 1.33
NPAS4-203ENST00000525148 EFCAB6Q5THR3 1501 aa23.37■■□□□ 1.33
NPAS4-203ENST00000525148 PER1O15534 1290 aaPredicted RBP23.36■■□□□ 1.33
NPAS4-203ENST00000525148 IRX6P78412 446 aaPredicted RBP23.36■■□□□ 1.33
NPAS4-203ENST00000525148 PNISRQ8TF01 805 aaKnown RBP23.36■■□□□ 1.33
NPAS4-203ENST00000525148 MLH3Q9UHC1 1453 aa23.35■■□□□ 1.33
NPAS4-203ENST00000525148 CFAP74Q9C0B2 1584 aa23.34■■□□□ 1.33
NPAS4-203ENST00000525148 GGT6Q6P531 493 aa23.34■■□□□ 1.33
NPAS4-203ENST00000525148 CYB5RLQ6IPT4 315 aa23.33■■□□□ 1.32
NPAS4-203ENST00000525148 TMC1Q8TDI8 760 aa23.33■■□□□ 1.32
NPAS4-203ENST00000525148 HECW2Q9P2P5 1572 aa23.32■■□□□ 1.32
NPAS4-203ENST00000525148 TMF1P82094 1093 aa23.32■■□□□ 1.32
NPAS4-203ENST00000525148 ABCA6Q8N139 1617 aa23.31■■□□□ 1.32
NPAS4-203ENST00000525148 PANK3Q9H999 370 aa23.31■■□□□ 1.32
NPAS4-203ENST00000525148 ADGRF5Q8IZF2 1346 aa23.31■■□□□ 1.32
NPAS4-203ENST00000525148 MYBBP1AQ9BQG0 1328 aaKnown RBP23.31■■□□□ 1.32
NPAS4-203ENST00000525148 LMTK2Q8IWU2 1503 aa23.31■■□□□ 1.32
NPAS4-203ENST00000525148 IQGAP1P46940 1657 aa23.3■■□□□ 1.32
NPAS4-203ENST00000525148 RALBP1Q15311 655 aa23.3■■□□□ 1.32
NPAS4-203ENST00000525148 CFAP70Q5T0N1 1121 aa23.28■■□□□ 1.32
NPAS4-203ENST00000525148 PARD3Q8TEW0 1356 aa23.28■■□□□ 1.32
NPAS4-203ENST00000525148 MROH2AA6NES4 1674 aa23.27■■□□□ 1.32
NPAS4-203ENST00000525148 NPATQ14207 1427 aa23.27■■□□□ 1.32
NPAS4-203ENST00000525148 CC2D1BQ5T0F9 858 aaKnown RBP23.26■■□□□ 1.31
NPAS4-203ENST00000525148 NEO1Q92859 1461 aa23.26■■□□□ 1.31
NPAS4-203ENST00000525148 SCAF11Q99590 1463 aaKnown RBP23.26■■□□□ 1.31
NPAS4-203ENST00000525148 KTN1Q86UP2 1357 aaKnown RBP23.26■■□□□ 1.31
NPAS4-203ENST00000525148 BRD4O60885 1362 aaPredicted RBP23.25■■□□□ 1.31
NPAS4-203ENST00000525148 STAC3Q96MF2 364 aa23.25■■□□□ 1.31
NPAS4-203ENST00000525148 NEURL4Q96JN8 1562 aa23.24■■□□□ 1.31
NPAS4-203ENST00000525148 LRPPRCP42704 1394 aaKnown RBP23.23■■□□□ 1.31
NPAS4-203ENST00000525148 CHGAP10645 457 aaKnown RBP23.23■■□□□ 1.31
NPAS4-203ENST00000525148 TSHZ2Q9NRE2 1034 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms