RNA–Protein interactions for RNA: ENST00000525116.5

CASP4-205, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-205ENST00000525116 PRKCSHP14314 528 aaPredicted RBP11.69□□□□□ -0.54
CASP4-205ENST00000525116 ARAP3Q8WWN8 1544 aa11.69□□□□□ -0.54
CASP4-205ENST00000525116 ARID4BQ4LE39 1312 aaPredicted RBP11.68□□□□□ -0.54
CASP4-205ENST00000525116 PHF8Q9UPP1 1060 aa11.66□□□□□ -0.54
CASP4-205ENST00000525116 PTPRMP28827 1452 aa11.65□□□□□ -0.54
CASP4-205ENST00000525116 C19orf67A6NJJ6 358 aa11.65□□□□□ -0.54
CASP4-205ENST00000525116 FBXO22Q8NEZ5 403 aa11.65□□□□□ -0.54
CASP4-205ENST00000525116 TMEM106CQ9BVX2 250 aa11.65□□□□□ -0.54
CASP4-205ENST00000525116 ABCA9Q8IUA7 1624 aa11.64□□□□□ -0.55
CASP4-205ENST00000525116 CADPS2Q86UW7 1296 aa11.64□□□□□ -0.55
CASP4-205ENST00000525116 FBXO41Q8TF61 875 aa11.64□□□□□ -0.55
CASP4-205ENST00000525116 PHLDB1Q86UU1 1377 aa11.64□□□□□ -0.55
CASP4-205ENST00000525116 ADAMTSL3P82987 1691 aa11.62□□□□□ -0.55
CASP4-205ENST00000525116 RAPGEF6Q8TEU7 1601 aa11.61□□□□□ -0.55
CASP4-205ENST00000525116 MS4A3Q96HJ5 214 aa11.61□□□□□ -0.55
CASP4-205ENST00000525116 NEO1Q92859 1461 aa11.61□□□□□ -0.55
CASP4-205ENST00000525116 SAMD9Q5K651 1589 aa11.6□□□□□ -0.55
CASP4-205ENST00000525116 MKRN3Q13064 507 aaKnown RBP11.6□□□□□ -0.55
CASP4-205ENST00000525116 PLEKHD1A6NEE1 506 aa11.59□□□□□ -0.55
CASP4-205ENST00000525116 PPP1R37O75864 691 aa11.59□□□□□ -0.55
CASP4-205ENST00000525116 MADDQ8WXG6 1647 aa11.59□□□□□ -0.55
CASP4-205ENST00000525116 FRMPD1Q5SYB0 1578 aa11.58□□□□□ -0.55
CASP4-205ENST00000525116 BCORL1Q5H9F3 1711 aa11.58□□□□□ -0.56
CASP4-205ENST00000525116 FHOD3Q2V2M9 1422 aa11.58□□□□□ -0.56
CASP4-205ENST00000525116 NUP153P49790 1475 aaKnown RBP11.57□□□□□ -0.56
CASP4-205ENST00000525116 TIE1P35590 1138 aa11.56□□□□□ -0.56
CASP4-205ENST00000525116 HSPA2P54652 639 aa11.56□□□□□ -0.56
CASP4-205ENST00000525116 MLECQ14165 292 aa11.56□□□□□ -0.56
CASP4-205ENST00000525116 DENND4BO75064 1496 aaPredicted RBP11.56□□□□□ -0.56
CASP4-205ENST00000525116 RIMS1Q86UR5 1692 aaKnown RBP11.55□□□□□ -0.56
CASP4-205ENST00000525116 PCF11O94913 1555 aaKnown RBP11.55□□□□□ -0.56
CASP4-205ENST00000525116 AKNAQ7Z591 1439 aa11.55□□□□□ -0.56
CASP4-205ENST00000525116 KCNV2Q8TDN2 545 aa11.55□□□□□ -0.56
CASP4-205ENST00000525116 LMTK3Q96Q04 1460 aa11.54□□□□□ -0.56
CASP4-205ENST00000525116 FANCAO15360 1455 aa11.53□□□□□ -0.56
CASP4-205ENST00000525116 TRPC6Q9Y210 931 aa11.53□□□□□ -0.56
CASP4-205ENST00000525116 ARHGEF40Q8TER5 1519 aa11.52□□□□□ -0.57
CASP4-205ENST00000525116 CLCN6P51797 869 aa11.52□□□□□ -0.57
CASP4-205ENST00000525116 ATP1B4Q9UN42 357 aaPredicted RBP11.52□□□□□ -0.57
CASP4-205ENST00000525116 RICTORQ6R327 1708 aa11.52□□□□□ -0.57
CASP4-205ENST00000525116 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.51□□□□□ -0.57
CASP4-205ENST00000525116 MS4A4AQ96JQ5 239 aa11.51□□□□□ -0.57
CASP4-205ENST00000525116 POGZQ7Z3K3 1410 aa11.51□□□□□ -0.57
CASP4-205ENST00000525116 YEATS2Q9ULM3 1422 aa11.51□□□□□ -0.57
CASP4-205ENST00000525116 TTLL13PA6NNM8 815 aa11.5□□□□□ -0.57
CASP4-205ENST00000525116 HAX1O00165 279 aa11.5□□□□□ -0.57
CASP4-205ENST00000525116 TTC37Q6PGP7 1564 aa11.5□□□□□ -0.57
CASP4-205ENST00000525116 PDE4AP27815 886 aa11.49□□□□□ -0.57
CASP4-205ENST00000525116 ZFYVE16Q7Z3T8 1539 aa11.49□□□□□ -0.57
CASP4-205ENST00000525116 CFAP74Q9C0B2 1584 aa11.49□□□□□ -0.57
CASP4-205ENST00000525116 E2F4Q16254 413 aa11.48□□□□□ -0.57
CASP4-205ENST00000525116 CDK13Q14004 1512 aaKnown RBP11.48□□□□□ -0.57
CASP4-205ENST00000525116 SIGLEC1Q9BZZ2 1709 aa11.48□□□□□ -0.57
CASP4-205ENST00000525116 SCAPERQ9BY12 1400 aa11.47□□□□□ -0.57
CASP4-205ENST00000525116 TULP1O00294 542 aaPredicted RBP11.47□□□□□ -0.57
CASP4-205ENST00000525116 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.47□□□□□ -0.57
CASP4-205ENST00000525116 HECW1Q76N89 1606 aa11.46□□□□□ -0.57
CASP4-205ENST00000525116 EFCAB5A4FU69 1503 aa11.46□□□□□ -0.57
CASP4-205ENST00000525116 EEA1Q15075 1411 aa11.46□□□□□ -0.57
CASP4-205ENST00000525116 CERKQ8TCT0 537 aa11.46□□□□□ -0.57
CASP4-205ENST00000525116 ARHGEF1Q92888 912 aaKnown RBP11.46□□□□□ -0.57
CASP4-205ENST00000525116 BMP2KQ9NSY1 1161 aaPredicted RBP11.46□□□□□ -0.57
CASP4-205ENST00000525116 ZMYM4Q5VZL5 1548 aa11.45□□□□□ -0.58
CASP4-205ENST00000525116 CEBPAP49715 358 aaPredicted RBP11.45□□□□□ -0.58
CASP4-205ENST00000525116 LARP6Q9BRS8 491 aaKnown RBP11.45□□□□□ -0.58
CASP4-205ENST00000525116 MYT1LQ9UL68 1186 aa11.45□□□□□ -0.58
CASP4-205ENST00000525116 MAGI2Q86UL8 1455 aa11.44□□□□□ -0.58
CASP4-205ENST00000525116 PLCH2O75038 1416 aa11.44□□□□□ -0.58
CASP4-205ENST00000525116 UBTFP17480 764 aaKnown RBP11.44□□□□□ -0.58
CASP4-205ENST00000525116 EFCAB2Q5VUJ9 269 aa11.44□□□□□ -0.58
CASP4-205ENST00000525116 TRIM35Q9UPQ4 493 aa11.44□□□□□ -0.58
CASP4-205ENST00000525116 FER1L4A9Z1Z3 1794 aa11.44□□□□□ -0.58
CASP4-205ENST00000525116 GALR2O43603 387 aaPredicted RBP11.43□□□□□ -0.58
CASP4-205ENST00000525116 NCKAP5LQ9HCH0 1330 aa11.42□□□□□ -0.58
CASP4-205ENST00000525116 ATP10AO60312 1499 aa11.42□□□□□ -0.58
CASP4-205ENST00000525116 AFAP1Q8N556 730 aa11.41□□□□□ -0.58
CASP4-205ENST00000525116 DDX27Q96GQ7 796 aaKnown RBP11.41□□□□□ -0.58
CASP4-205ENST00000525116 MFSD10Q14728 455 aa11.4□□□□□ -0.58
CASP4-205ENST00000525116 CRISPLD2Q9H0B8 497 aa11.4□□□□□ -0.58
CASP4-205ENST00000525116 CDK11AQ9UQ88 783 aaPredicted RBP11.4□□□□□ -0.58
CASP4-205ENST00000525116 C9orf84Q5VXU9 1444 aa11.39□□□□□ -0.59
CASP4-205ENST00000525116 ARHGEF12Q9NZN5 1544 aa11.39□□□□□ -0.59
CASP4-205ENST00000525116 MYO5CQ9NQX4 1742 aa11.38□□□□□ -0.59
CASP4-205ENST00000525116 ARHGAP5Q13017 1502 aa11.37□□□□□ -0.59
CASP4-205ENST00000525116 KIF14Q15058 1648 aa11.37□□□□□ -0.59
CASP4-205ENST00000525116 PREX1Q8TCU6 1659 aa11.36□□□□□ -0.59
CASP4-205ENST00000525116 FMN1Q68DA7 1419 aa11.36□□□□□ -0.59
CASP4-205ENST00000525116 LMOD2Q6P5Q4 547 aa11.36□□□□□ -0.59
CASP4-205ENST00000525116 ESF1Q9H501 851 aaKnown RBP11.35□□□□□ -0.59
CASP4-205ENST00000525116 ZNF518AQ6AHZ1 1483 aa11.35□□□□□ -0.59
CASP4-205ENST00000525116 ARHGAP35Q9NRY4 1499 aa11.35□□□□□ -0.59
CASP4-205ENST00000525116 CLIP1P30622 1438 aa11.34□□□□□ -0.59
CASP4-205ENST00000525116 TROQ12816 1431 aaPredicted RBP11.34□□□□□ -0.59
CASP4-205ENST00000525116 UHRF1BP1Q6BDS2 1440 aa11.34□□□□□ -0.59
CASP4-205ENST00000525116 DISP3Q9P2K9 1392 aa11.33□□□□□ -0.6
CASP4-205ENST00000525116 STRCQ7RTU9 1775 aa11.33□□□□□ -0.6
CASP4-205ENST00000525116 G3V3G9 751 aa11.32□□□□□ -0.6
CASP4-205ENST00000525116 IER5LQ5T953 404 aa11.32□□□□□ -0.6
CASP4-205ENST00000525116 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.32□□□□□ -0.6
CASP4-205ENST00000525116 ATN1P54259 1190 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms