RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 SPDYE16A6NNV3 312 aaPredicted RBP8.08□□□□□ -1.12
CSDE1-208ENST00000524652 BHMG1C9JSJ3 638 aaPredicted RBP8.06□□□□□ -1.12
CSDE1-208ENST00000524652 HCSTQ9UBK5 93 aa8.06□□□□□ -1.12
CSDE1-208ENST00000524652 NBPF3Q9H094 633 aa8.05□□□□□ -1.12
CSDE1-208ENST00000524652 DDX12PQ92771 950 aa8.04□□□□□ -1.12
CSDE1-208ENST00000524652 KCTD12Q96CX2 325 aaKnown RBP8.03□□□□□ -1.12
CSDE1-208ENST00000524652 COL9A1P20849 921 aa8.02□□□□□ -1.13
CSDE1-208ENST00000524652 EN1Q05925 392 aaPredicted RBP8.02□□□□□ -1.13
CSDE1-208ENST00000524652 NBR1Q14596 966 aa8.02□□□□□ -1.13
CSDE1-208ENST00000524652 C6orf132Q5T0Z8 1188 aa8.02□□□□□ -1.13
CSDE1-208ENST00000524652 RABGEF1Q9UJ41 708 aa8.02□□□□□ -1.13
CSDE1-208ENST00000524652 MRPL50Q8N5N7 158 aaKnown RBP8.01□□□□□ -1.13
CSDE1-208ENST00000524652 ONECUT3O60422 494 aaPredicted RBP8□□□□□ -1.13
CSDE1-208ENST00000524652 PROX2Q3B8N5 592 aa8□□□□□ -1.13
CSDE1-208ENST00000524652 TSHZ2Q9NRE2 1034 aa8□□□□□ -1.13
CSDE1-208ENST00000524652 RBM33Q96EV2 1170 aaKnown RBP7.99□□□□□ -1.13
CSDE1-208ENST00000524652 GOLGA8CPA6NN73 597 aa7.98□□□□□ -1.13
CSDE1-208ENST00000524652 MAP3K7O43318 606 aa7.98□□□□□ -1.13
CSDE1-208ENST00000524652 THSD4Q6ZMP0 1018 aa7.97□□□□□ -1.13
CSDE1-208ENST00000524652 LAPTM4BQ86VI4 370 aa7.97□□□□□ -1.13
CSDE1-208ENST00000524652 WNT2BQ93097 391 aa7.97□□□□□ -1.13
CSDE1-208ENST00000524652 TRIM6-TRIM34B2RNG4 842 aa7.96□□□□□ -1.14
CSDE1-208ENST00000524652 GRXCR2A6NFK2 248 aa7.95□□□□□ -1.14
CSDE1-208ENST00000524652 TSR1Q2NL82 804 aaKnown RBP7.95□□□□□ -1.14
CSDE1-208ENST00000524652 ARHGEF1Q92888 912 aaKnown RBP7.95□□□□□ -1.14
CSDE1-208ENST00000524652 CERKQ8TCT0 537 aa7.94□□□□□ -1.14
CSDE1-208ENST00000524652 PLA2G2EQ9NZK7 142 aa7.94□□□□□ -1.14
CSDE1-208ENST00000524652 KIAA1468Q9P260 1216 aa7.94□□□□□ -1.14
CSDE1-208ENST00000524652 PTPN5P54829 565 aa7.93□□□□□ -1.14
CSDE1-208ENST00000524652 PLCB2Q00722 1185 aa7.93□□□□□ -1.14
CSDE1-208ENST00000524652 ANKK1Q8NFD2 765 aa7.93□□□□□ -1.14
CSDE1-208ENST00000524652 KCNV2Q8TDN2 545 aa7.93□□□□□ -1.14
CSDE1-208ENST00000524652 OSBPP22059 807 aa7.92□□□□□ -1.14
CSDE1-208ENST00000524652 P3H3Q8IVL6 736 aa7.92□□□□□ -1.14
CSDE1-208ENST00000524652 PRIM1P49642 420 aaKnown RBP7.91□□□□□ -1.14
CSDE1-208ENST00000524652 FAM98CQ17RN3 349 aaKnown RBP7.91□□□□□ -1.14
CSDE1-208ENST00000524652 ZFRQ96KR1 1074 aaKnown RBP7.91□□□□□ -1.14
CSDE1-208ENST00000524652 PACS2Q86VP3 889 aa7.9□□□□□ -1.14
CSDE1-208ENST00000524652 SEPT9Q9UHD8 586 aaPredicted RBP7.9□□□□□ -1.14
CSDE1-208ENST00000524652 TSKSQ9UJT2 592 aa7.9□□□□□ -1.14
CSDE1-208ENST00000524652 SOWAHBA6NEL2 793 aa7.89□□□□□ -1.15
CSDE1-208ENST00000524652 CDCA7LQ96GN5 454 aa7.89□□□□□ -1.15
CSDE1-208ENST00000524652 RBM27Q9P2N5 1060 aaKnown RBP7.89□□□□□ -1.15
CSDE1-208ENST00000524652 PRSS12P56730 875 aa7.88□□□□□ -1.15
CSDE1-208ENST00000524652 CDHR5Q9HBB8 845 aa7.87□□□□□ -1.15
CSDE1-208ENST00000524652 BCAMP50895 628 aa7.86□□□□□ -1.15
CSDE1-208ENST00000524652 IFFO2Q5TF58 517 aa7.86□□□□□ -1.15
CSDE1-208ENST00000524652 NYAP1Q6ZVC0 841 aa7.86□□□□□ -1.15
CSDE1-208ENST00000524652 NBPF26B4DH59 902 aa7.85□□□□□ -1.15
CSDE1-208ENST00000524652 LRCH3Q96II8 777 aa7.84□□□□□ -1.15
CSDE1-208ENST00000524652 MLLT3P42568 568 aaPredicted RBP7.83□□□□□ -1.16
CSDE1-208ENST00000524652 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.83□□□□□ -1.16
CSDE1-208ENST00000524652 FAM198AQ9UFP1 575 aa7.83□□□□□ -1.16
CSDE1-208ENST00000524652 TATDN2Q93075 761 aa7.82□□□□□ -1.16
CSDE1-208ENST00000524652 NPDC1Q9NQX5 325 aaPredicted RBP7.82□□□□□ -1.16
CSDE1-208ENST00000524652 TTC13Q8NBP0 860 aa7.81□□□□□ -1.16
CSDE1-208ENST00000524652 WBP1LQ9NX94 342 aa7.81□□□□□ -1.16
CSDE1-208ENST00000524652 TSR3Q9UJK0 312 aaKnown RBP7.81□□□□□ -1.16
CSDE1-208ENST00000524652 PNMA3Q9UL41 463 aa7.81□□□□□ -1.16
CSDE1-208ENST00000524652 SMAPO00193 183 aa7.8□□□□□ -1.16
CSDE1-208ENST00000524652 ITGBL1O95965 494 aaPredicted RBP7.8□□□□□ -1.16
CSDE1-208ENST00000524652 HPS5Q9UPZ3 1129 aa7.8□□□□□ -1.16
CSDE1-208ENST00000524652 PADI6Q6TGC4 694 aa7.79□□□□□ -1.16
CSDE1-208ENST00000524652 NUDT18Q6ZVK8 323 aa7.79□□□□□ -1.16
CSDE1-208ENST00000524652 C3orf80F5H4A9 247 aa7.78□□□□□ -1.16
CSDE1-208ENST00000524652 PTGDRQ13258 359 aa7.78□□□□□ -1.16
CSDE1-208ENST00000524652 SAMD7Q7Z3H4 446 aa7.78□□□□□ -1.16
CSDE1-208ENST00000524652 SEMA3EO15041 775 aa7.77□□□□□ -1.17
CSDE1-208ENST00000524652 HAP1P54257 671 aaPredicted RBP7.77□□□□□ -1.17
CSDE1-208ENST00000524652 A0A0G2JS52 829 aa7.76□□□□□ -1.17
CSDE1-208ENST00000524652 HDGFP51858 240 aaKnown RBP7.75□□□□□ -1.17
CSDE1-208ENST00000524652 PPP4CP60510 307 aa7.75□□□□□ -1.17
CSDE1-208ENST00000524652 RGS20O76081 388 aa7.74□□□□□ -1.17
CSDE1-208ENST00000524652 NECTIN2Q92692 538 aa7.74□□□□□ -1.17
CSDE1-208ENST00000524652 TESPA1A2RU30 521 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-208ENST00000524652 EYA1Q99502 592 aa7.73□□□□□ -1.17
CSDE1-208ENST00000524652 NUTM2FA1L443 756 aa7.72□□□□□ -1.17
CSDE1-208ENST00000524652 KCNC4Q03721 635 aa7.72□□□□□ -1.17
CSDE1-208ENST00000524652 SMYD5Q6GMV2 418 aa7.72□□□□□ -1.17
CSDE1-208ENST00000524652 RNF40O75150 1001 aa7.71□□□□□ -1.18
CSDE1-208ENST00000524652 FCHSD2O94868 740 aa7.71□□□□□ -1.18
CSDE1-208ENST00000524652 SLF2Q8IX21 1173 aa7.71□□□□□ -1.18
CSDE1-208ENST00000524652 SLC4A3P48751 1232 aa7.7□□□□□ -1.18
CSDE1-208ENST00000524652 SWT1Q5T5J6 900 aaKnown RBP7.7□□□□□ -1.18
CSDE1-208ENST00000524652 RBM46Q8TBY0 533 aaKnown RBP7.69□□□□□ -1.18
CSDE1-208ENST00000524652 KDM2AQ9Y2K7 1162 aa7.69□□□□□ -1.18
CSDE1-208ENST00000524652 ADGRG1Q9Y653 693 aa7.69□□□□□ -1.18
CSDE1-208ENST00000524652 DNAJB2P25686 324 aa7.68□□□□□ -1.18
CSDE1-208ENST00000524652 HIC1Q14526 733 aa7.68□□□□□ -1.18
CSDE1-208ENST00000524652 VSIG10Q8N0Z9 540 aa7.67□□□□□ -1.18
CSDE1-208ENST00000524652 APLP1P51693 650 aa7.66□□□□□ -1.18
CSDE1-208ENST00000524652 TJAP1Q5JTD0 557 aa7.66□□□□□ -1.18
CSDE1-208ENST00000524652 RBM26Q5T8P6 1007 aaKnown RBP7.66□□□□□ -1.18
CSDE1-208ENST00000524652 TMEM134Q9H6X4 195 aa7.66□□□□□ -1.18
CSDE1-208ENST00000524652 MTRQ99707 1265 aa7.65□□□□□ -1.18
CSDE1-208ENST00000524652 PRR14Q9BWN1 585 aa7.65□□□□□ -1.18
CSDE1-208ENST00000524652 IL21Q9HBE4 155 aa7.65□□□□□ -1.18
CSDE1-208ENST00000524652 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.63□□□□□ -1.19
CSDE1-208ENST00000524652 RCCD1A6NED2 376 aa7.63□□□□□ -1.19
CSDE1-208ENST00000524652 GPR37O15354 613 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms