RNA–Protein interactions for RNA: ENST00000524317.1

SCUBE2-208, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 2

Gene SCUBE2, Length 2,322 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-208ENST00000524317 KDM5DQ9BY66 1539 aa16.44■□□□□ 0.22
SCUBE2-208ENST00000524317 EFCAB2Q5VUJ9 269 aa16.44■□□□□ 0.22
SCUBE2-208ENST00000524317 ANP32EQ9BTT0 268 aa16.43■□□□□ 0.22
SCUBE2-208ENST00000524317 ARHGEF12Q9NZN5 1544 aa16.42■□□□□ 0.22
SCUBE2-208ENST00000524317 NBPF8Q3BBV2 869 aa16.42■□□□□ 0.22
SCUBE2-208ENST00000524317 OSCARQ8IYS5 282 aa16.42■□□□□ 0.22
SCUBE2-208ENST00000524317 TSHZ2Q9NRE2 1034 aa16.42■□□□□ 0.22
SCUBE2-208ENST00000524317 HSPA5P11021 654 aaKnown RBP16.41■□□□□ 0.22
SCUBE2-208ENST00000524317 MAST1Q9Y2H9 1570 aa16.41■□□□□ 0.22
SCUBE2-208ENST00000524317 MYO5CQ9NQX4 1742 aa16.4■□□□□ 0.22
SCUBE2-208ENST00000524317 EIF4G2P78344 907 aaKnown RBP eCLIP16.4■□□□□ 0.22
SCUBE2-208ENST00000524317 WDR7Q9Y4E6 1490 aa16.39■□□□□ 0.21
SCUBE2-208ENST00000524317 CNKSR2Q8WXI2 1034 aa16.39■□□□□ 0.21
SCUBE2-208ENST00000524317 NPM1P06748 294 aaKnown RBP eCLIP16.36■□□□□ 0.21
SCUBE2-208ENST00000524317 ABCC1P33527 1531 aa16.36■□□□□ 0.21
SCUBE2-208ENST00000524317 TRAPPC8Q9Y2L5 1435 aa16.35■□□□□ 0.21
SCUBE2-208ENST00000524317 ARAP3Q8WWN8 1544 aa16.35■□□□□ 0.21
SCUBE2-208ENST00000524317 PLXNC1O60486 1568 aa16.35■□□□□ 0.21
SCUBE2-208ENST00000524317 FAM135AQ9P2D6 1515 aa16.35■□□□□ 0.21
SCUBE2-208ENST00000524317 WASHC2AQ641Q2 1341 aa16.34■□□□□ 0.21
SCUBE2-208ENST00000524317 NBR1Q14596 966 aa16.32■□□□□ 0.2
SCUBE2-208ENST00000524317 ASXL2Q76L83 1435 aa16.32■□□□□ 0.2
SCUBE2-208ENST00000524317 DUOX2Q9NRD8 1548 aa16.32■□□□□ 0.2
SCUBE2-208ENST00000524317 ERBINQ96RT1 1412 aa16.31■□□□□ 0.2
SCUBE2-208ENST00000524317 ANP32CO43423 234 aa16.31■□□□□ 0.2
SCUBE2-208ENST00000524317 AFAP1Q8N556 730 aa16.3■□□□□ 0.2
SCUBE2-208ENST00000524317 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.3■□□□□ 0.2
SCUBE2-208ENST00000524317 SPATA31E1Q6ZUB1 1445 aa16.3■□□□□ 0.2
SCUBE2-208ENST00000524317 UNC13BO14795 1591 aa16.29■□□□□ 0.2
SCUBE2-208ENST00000524317 SPAG9O60271 1321 aaKnown RBP16.29■□□□□ 0.2
SCUBE2-208ENST00000524317 FANCAO15360 1455 aa16.28■□□□□ 0.2
SCUBE2-208ENST00000524317 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.28■□□□□ 0.2
SCUBE2-208ENST00000524317 RTEL1-TNFRSF6BF6WH68 1400 aa16.28■□□□□ 0.2
SCUBE2-208ENST00000524317 C11orf95C9JLR9 678 aaPredicted RBP16.28■□□□□ 0.2
SCUBE2-208ENST00000524317 UHRF1BP1Q6BDS2 1440 aa16.28■□□□□ 0.2
SCUBE2-208ENST00000524317 ZNF326Q5BKZ1 582 aaKnown RBP16.27■□□□□ 0.2
SCUBE2-208ENST00000524317 FBXO3Q9UK99 471 aa16.27■□□□□ 0.2
SCUBE2-208ENST00000524317 CCER2I3L3R5 266 aa16.27■□□□□ 0.19
SCUBE2-208ENST00000524317 ABCA9Q8IUA7 1624 aa16.26■□□□□ 0.19
SCUBE2-208ENST00000524317 MAGI2Q86UL8 1455 aa16.26■□□□□ 0.19
SCUBE2-208ENST00000524317 BBXQ8WY36 941 aaPredicted RBP16.26■□□□□ 0.19
SCUBE2-208ENST00000524317 PLA2R1Q13018 1463 aa16.25■□□□□ 0.19
SCUBE2-208ENST00000524317 CCDC7Q96M83 1385 aa16.25■□□□□ 0.19
SCUBE2-208ENST00000524317 CCDC144AA2RUR9 1427 aa16.24■□□□□ 0.19
SCUBE2-208ENST00000524317 ZFYVE16Q7Z3T8 1539 aa16.24■□□□□ 0.19
SCUBE2-208ENST00000524317 IQGAP3Q86VI3 1631 aa16.23■□□□□ 0.19
SCUBE2-208ENST00000524317 ADGRL1O94910 1474 aa16.22■□□□□ 0.19
SCUBE2-208ENST00000524317 SCAPERQ9BY12 1400 aa16.22■□□□□ 0.19
SCUBE2-208ENST00000524317 USP47Q96K76 1375 aa16.22■□□□□ 0.19
SCUBE2-208ENST00000524317 DCAF11Q8TEB1 546 aa16.22■□□□□ 0.19
SCUBE2-208ENST00000524317 RALGAPBQ86X10 1494 aa16.21■□□□□ 0.19
SCUBE2-208ENST00000524317 KIF7Q2M1P5 1343 aa16.21■□□□□ 0.18
SCUBE2-208ENST00000524317 CNTLNQ9NXG0 1405 aa16.2■□□□□ 0.18
SCUBE2-208ENST00000524317 ATP10AO60312 1499 aa16.19■□□□□ 0.18
SCUBE2-208ENST00000524317 CARD11Q9BXL7 1154 aa16.17■□□□□ 0.18
SCUBE2-208ENST00000524317 ATP7AQ04656 1500 aa16.17■□□□□ 0.18
SCUBE2-208ENST00000524317 INO80Q9ULG1 1556 aaPredicted RBP16.16■□□□□ 0.18
SCUBE2-208ENST00000524317 RGL3Q3MIN7 710 aa16.16■□□□□ 0.18
SCUBE2-208ENST00000524317 CD109Q6YHK3 1445 aa16.15■□□□□ 0.18
SCUBE2-208ENST00000524317 ATXN8OSP0DMR3 200 aa16.15■□□□□ 0.18
SCUBE2-208ENST00000524317 DHX29Q7Z478 1369 aaKnown RBP16.14■□□□□ 0.17
SCUBE2-208ENST00000524317 IFNLR1Q8IU57 520 aaPredicted RBP16.14■□□□□ 0.17
SCUBE2-208ENST00000524317 MYT1LQ9UL68 1186 aa16.14■□□□□ 0.17
SCUBE2-208ENST00000524317 PRAG1Q86YV5 1406 aa16.14■□□□□ 0.17
SCUBE2-208ENST00000524317 KDM5CP41229 1560 aa16.13■□□□□ 0.17
SCUBE2-208ENST00000524317 A2MP01023 1474 aa16.13■□□□□ 0.17
SCUBE2-208ENST00000524317 ROCK2O75116 1388 aaKnown RBP16.12■□□□□ 0.17
SCUBE2-208ENST00000524317 SLC4A2P04920 1241 aa16.12■□□□□ 0.17
SCUBE2-208ENST00000524317 ZNF518AQ6AHZ1 1483 aa16.11■□□□□ 0.17
SCUBE2-208ENST00000524317 KIF3BO15066 747 aa16.11■□□□□ 0.17
SCUBE2-208ENST00000524317 ARID4BQ4LE39 1312 aaPredicted RBP16.11■□□□□ 0.17
SCUBE2-208ENST00000524317 DEPDC5O75140 1603 aa16.09■□□□□ 0.17
SCUBE2-208ENST00000524317 ST20-MTHFSA0A0A6YYL1 179 aa16.09■□□□□ 0.17
SCUBE2-208ENST00000524317 PRKRIP1Q9H875 184 aaPredicted RBP16.09■□□□□ 0.17
SCUBE2-208ENST00000524317 KANK1Q14678 1352 aa16.09■□□□□ 0.17
SCUBE2-208ENST00000524317 PTPRTO14522 1441 aa16.08■□□□□ 0.17
SCUBE2-208ENST00000524317 POGZQ7Z3K3 1410 aa16.08■□□□□ 0.16
SCUBE2-208ENST00000524317 VWDEQ8N2E2 1590 aa16.07■□□□□ 0.16
SCUBE2-208ENST00000524317 BCORL1Q5H9F3 1711 aa16.07■□□□□ 0.16
SCUBE2-208ENST00000524317 GPRASP1Q5JY77 1395 aa16.06■□□□□ 0.16
SCUBE2-208ENST00000524317 NBPF1Q3BBV0 1214 aa16.06■□□□□ 0.16
SCUBE2-208ENST00000524317 TRPM2O94759 1503 aa16.06■□□□□ 0.16
SCUBE2-208ENST00000524317 PRDM15P57071 1507 aaPredicted RBP16.05■□□□□ 0.16
SCUBE2-208ENST00000524317 POLR3GLQ9BT43 218 aa16.05■□□□□ 0.16
SCUBE2-208ENST00000524317 E9PCH4 1651 aa16.05■□□□□ 0.16
SCUBE2-208ENST00000524317 EIF2AK4Q9P2K8 1649 aaKnown RBP16.04■□□□□ 0.16
SCUBE2-208ENST00000524317 CYB5RLQ6IPT4 315 aa16.04■□□□□ 0.16
SCUBE2-208ENST00000524317 MLH3Q9UHC1 1453 aa16.04■□□□□ 0.16
SCUBE2-208ENST00000524317 CFAP74Q9C0B2 1584 aa16.03■□□□□ 0.16
SCUBE2-208ENST00000524317 KIDINS220Q9ULH0 1771 aa16.03■□□□□ 0.16
SCUBE2-208ENST00000524317 TRPM1Q7Z4N2 1603 aa16.03■□□□□ 0.16
SCUBE2-208ENST00000524317 MROH1Q8NDA8 1641 aa16.03■□□□□ 0.16
SCUBE2-208ENST00000524317 DNAJC5Q9H3Z4 198 aa16.02■□□□□ 0.16
SCUBE2-208ENST00000524317 POLR1AO95602 1720 aaPredicted RBP16.02■□□□□ 0.16
SCUBE2-208ENST00000524317 CCDC184Q52MB2 194 aa16.02■□□□□ 0.15
SCUBE2-208ENST00000524317 NEO1Q92859 1461 aa16.02■□□□□ 0.15
SCUBE2-208ENST00000524317 TET3O43151 1660 aa16.02■□□□□ 0.15
SCUBE2-208ENST00000524317 VASPP50552 380 aaPredicted RBP16.01■□□□□ 0.15
SCUBE2-208ENST00000524317 EIF5BO60841 1220 aaKnown RBP16■□□□□ 0.15
SCUBE2-208ENST00000524317 RAPGEF3O95398 923 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms