RNA–Protein interactions for RNA: ENST00000524177.5

CSMD1-214, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-214ENST00000524177 DDX27Q96GQ7 796 aaKnown RBP7.84□□□□□ -1.15
CSMD1-214ENST00000524177 NBPF3Q9H094 633 aa7.84□□□□□ -1.15
CSMD1-214ENST00000524177 RGS20O76081 388 aa7.83□□□□□ -1.16
CSMD1-214ENST00000524177 PRKCSHP14314 528 aaPredicted RBP7.83□□□□□ -1.16
CSMD1-214ENST00000524177 MAP3K9P80192 1104 aa7.83□□□□□ -1.16
CSMD1-214ENST00000524177 IRX2Q9BZI1 471 aaPredicted RBP7.82□□□□□ -1.16
CSMD1-214ENST00000524177 GTPBP6O43824 516 aaPredicted RBP7.81□□□□□ -1.16
CSMD1-214ENST00000524177 PROX2Q3B8N5 592 aa7.81□□□□□ -1.16
CSMD1-214ENST00000524177 PPP1R3GB7ZBB8 358 aa7.8□□□□□ -1.16
CSMD1-214ENST00000524177 EMILIN3Q9NT22 766 aa7.8□□□□□ -1.16
CSMD1-214ENST00000524177 PCDHGA10Q9Y5H3 936 aa7.8□□□□□ -1.16
CSMD1-214ENST00000524177 COL9A1P20849 921 aa7.79□□□□□ -1.16
CSMD1-214ENST00000524177 MFSD10Q14728 455 aa7.79□□□□□ -1.16
CSMD1-214ENST00000524177 ANKK1Q8NFD2 765 aa7.78□□□□□ -1.16
CSMD1-214ENST00000524177 RABGEF1Q9UJ41 708 aa7.78□□□□□ -1.16
CSMD1-214ENST00000524177 BCAMP50895 628 aa7.77□□□□□ -1.17
CSMD1-214ENST00000524177 TYW1BQ6NUM6 668 aa7.75□□□□□ -1.17
CSMD1-214ENST00000524177 PHF14O94880 888 aa7.74□□□□□ -1.17
CSMD1-214ENST00000524177 ITGBL1O95965 494 aaPredicted RBP7.74□□□□□ -1.17
CSMD1-214ENST00000524177 FBXW7Q969H0 707 aa7.74□□□□□ -1.17
CSMD1-214ENST00000524177 SOWAHBA6NEL2 793 aa7.73□□□□□ -1.17
CSMD1-214ENST00000524177 CADPS2Q86UW7 1296 aa7.73□□□□□ -1.17
CSMD1-214ENST00000524177 KIAA1468Q9P260 1216 aa7.73□□□□□ -1.17
CSMD1-214ENST00000524177 TPRNQ4KMQ1 711 aa7.72□□□□□ -1.17
CSMD1-214ENST00000524177 LAPTM4BQ86VI4 370 aa7.72□□□□□ -1.17
CSMD1-214ENST00000524177 ZFRQ96KR1 1074 aaKnown RBP7.72□□□□□ -1.17
CSMD1-214ENST00000524177 SEPT9Q9UHD8 586 aaPredicted RBP7.71□□□□□ -1.18
CSMD1-214ENST00000524177 WBP1LQ9NX94 342 aa7.7□□□□□ -1.18
CSMD1-214ENST00000524177 C6orf132Q5T0Z8 1188 aa7.69□□□□□ -1.18
CSMD1-214ENST00000524177 DPYSL4O14531 572 aa7.68□□□□□ -1.18
CSMD1-214ENST00000524177 TRIM6-TRIM34B2RNG4 842 aa7.67□□□□□ -1.18
CSMD1-214ENST00000524177 ONECUT3O60422 494 aaPredicted RBP7.67□□□□□ -1.18
CSMD1-214ENST00000524177 NYAP1Q6ZVC0 841 aa7.67□□□□□ -1.18
CSMD1-214ENST00000524177 RBM33Q96EV2 1170 aaKnown RBP7.67□□□□□ -1.18
CSMD1-214ENST00000524177 EPAS1Q99814 870 aa7.67□□□□□ -1.18
CSMD1-214ENST00000524177 KCNC4Q03721 635 aa7.66□□□□□ -1.18
CSMD1-214ENST00000524177 Q6ZNB5 142 aa7.66□□□□□ -1.18
CSMD1-214ENST00000524177 CAMK2BQ13554 666 aa7.65□□□□□ -1.18
CSMD1-214ENST00000524177 DDX12PQ92771 950 aa7.65□□□□□ -1.18
CSMD1-214ENST00000524177 NBR1Q14596 966 aa7.64□□□□□ -1.19
CSMD1-214ENST00000524177 FAM98CQ17RN3 349 aaKnown RBP7.64□□□□□ -1.19
CSMD1-214ENST00000524177 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.64□□□□□ -1.19
CSMD1-214ENST00000524177 HPS5Q9UPZ3 1129 aa7.64□□□□□ -1.19
CSMD1-214ENST00000524177 LRCH3Q96II8 777 aa7.63□□□□□ -1.19
CSMD1-214ENST00000524177 TSR3Q9UJK0 312 aaKnown RBP7.63□□□□□ -1.19
CSMD1-214ENST00000524177 TSR1Q2NL82 804 aaKnown RBP7.61□□□□□ -1.19
CSMD1-214ENST00000524177 TSKSQ9UJT2 592 aa7.6□□□□□ -1.19
CSMD1-214ENST00000524177 EN1Q05925 392 aaPredicted RBP7.59□□□□□ -1.19
CSMD1-214ENST00000524177 MAP3K7O43318 606 aa7.58□□□□□ -1.2
CSMD1-214ENST00000524177 SMAPO00193 183 aa7.57□□□□□ -1.2
CSMD1-214ENST00000524177 PPP4CP60510 307 aa7.57□□□□□ -1.2
CSMD1-214ENST00000524177 PACS2Q86VP3 889 aa7.57□□□□□ -1.2
CSMD1-214ENST00000524177 PDIA6Q15084 440 aa7.55□□□□□ -1.2
CSMD1-214ENST00000524177 SAMD7Q7Z3H4 446 aa7.55□□□□□ -1.2
CSMD1-214ENST00000524177 LCE2BO14633 110 aa7.54□□□□□ -1.2
CSMD1-214ENST00000524177 GFRA3O60609 400 aa7.54□□□□□ -1.2
CSMD1-214ENST00000524177 LAPTM4AQ15012 233 aa7.54□□□□□ -1.2
CSMD1-214ENST00000524177 TJAP1Q5JTD0 557 aa7.54□□□□□ -1.2
CSMD1-214ENST00000524177 CDCA7LQ96GN5 454 aa7.54□□□□□ -1.2
CSMD1-214ENST00000524177 FAM198AQ9UFP1 575 aa7.53□□□□□ -1.2
CSMD1-214ENST00000524177 C3orf80F5H4A9 247 aa7.52□□□□□ -1.21
CSMD1-214ENST00000524177 PRKD2Q9BZL6 878 aa7.52□□□□□ -1.21
CSMD1-214ENST00000524177 PRIM1P49642 420 aaKnown RBP7.51□□□□□ -1.21
CSMD1-214ENST00000524177 PRSS12P56730 875 aa7.51□□□□□ -1.21
CSMD1-214ENST00000524177 MTRQ99707 1265 aa7.51□□□□□ -1.21
CSMD1-214ENST00000524177 PNMA3Q9UL41 463 aa7.51□□□□□ -1.21
CSMD1-214ENST00000524177 PPP1R18Q6NYC8 613 aa7.5□□□□□ -1.21
CSMD1-214ENST00000524177 TRAF7Q6Q0C0 670 aa7.5□□□□□ -1.21
CSMD1-214ENST00000524177 GRXCR2A6NFK2 248 aa7.49□□□□□ -1.21
CSMD1-214ENST00000524177 SPDYE16A6NNV3 312 aaPredicted RBP7.49□□□□□ -1.21
CSMD1-214ENST00000524177 RNF40O75150 1001 aa7.49□□□□□ -1.21
CSMD1-214ENST00000524177 P3H3Q8IVL6 736 aa7.49□□□□□ -1.21
CSMD1-214ENST00000524177 TATDN2Q93075 761 aa7.49□□□□□ -1.21
CSMD1-214ENST00000524177 IL21Q9HBE4 155 aa7.49□□□□□ -1.21
CSMD1-214ENST00000524177 NBPF26B4DH59 902 aa7.48□□□□□ -1.21
CSMD1-214ENST00000524177 CERKQ8TCT0 537 aa7.48□□□□□ -1.21
CSMD1-214ENST00000524177 KCNV2Q8TDN2 545 aa7.48□□□□□ -1.21
CSMD1-214ENST00000524177 ZNF516Q92618 1163 aa7.48□□□□□ -1.21
CSMD1-214ENST00000524177 CDHR5Q9HBB8 845 aa7.48□□□□□ -1.21
CSMD1-214ENST00000524177 NRG2O14511 850 aaPredicted RBP7.46□□□□□ -1.22
CSMD1-214ENST00000524177 NUDT18Q6ZVK8 323 aa7.46□□□□□ -1.22
CSMD1-214ENST00000524177 APLP1P51693 650 aa7.45□□□□□ -1.22
CSMD1-214ENST00000524177 E2F4Q16254 413 aa7.45□□□□□ -1.22
CSMD1-214ENST00000524177 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.45□□□□□ -1.22
CSMD1-214ENST00000524177 NKX2-3Q8TAU0 364 aa7.44□□□□□ -1.22
CSMD1-214ENST00000524177 V9GY48 417 aaPredicted RBP7.44□□□□□ -1.22
CSMD1-214ENST00000524177 HDGFP51858 240 aaKnown RBP7.43□□□□□ -1.22
CSMD1-214ENST00000524177 OSBPP22059 807 aa7.42□□□□□ -1.22
CSMD1-214ENST00000524177 COPS2P61201 443 aa7.41□□□□□ -1.22
CSMD1-214ENST00000524177 SWT1Q5T5J6 900 aaKnown RBP7.41□□□□□ -1.22
CSMD1-214ENST00000524177 WDR70Q9NW82 654 aa7.41□□□□□ -1.22
CSMD1-214ENST00000524177 RBM27Q9P2N5 1060 aaKnown RBP7.4□□□□□ -1.22
CSMD1-214ENST00000524177 PDZRN3Q9UPQ7 1066 aa7.4□□□□□ -1.22
CSMD1-214ENST00000524177 ARIH1Q9Y4X5 557 aaPredicted RBP7.4□□□□□ -1.22
CSMD1-214ENST00000524177 PADI6Q6TGC4 694 aa7.39□□□□□ -1.23
CSMD1-214ENST00000524177 GGCXP38435 758 aa7.37□□□□□ -1.23
CSMD1-214ENST00000524177 ZNF787Q6DD87 383 aa7.37□□□□□ -1.23
CSMD1-214ENST00000524177 SLF2Q8IX21 1173 aa7.37□□□□□ -1.23
CSMD1-214ENST00000524177 TTC13Q8NBP0 860 aa7.37□□□□□ -1.23
CSMD1-214ENST00000524177 NECTIN2Q92692 538 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms