RNA–Protein interactions for RNA: ENST00000524094.1

LINC01339-204, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3

Gene LINC01339, Length 269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-204ENST00000524094 KRTAP9-6A0A140TA67 174 aa6.4□□□□□ -1.38
LINC01339-204ENST00000524094 PRKCSHP14314 528 aaPredicted RBP6.4□□□□□ -1.38
LINC01339-204ENST00000524094 TRIM41Q8WV44 630 aa6.4□□□□□ -1.38
LINC01339-204ENST00000524094 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.4□□□□□ -1.38
LINC01339-204ENST00000524094 SOWAHBA6NEL2 793 aa6.39□□□□□ -1.39
LINC01339-204ENST00000524094 GTPBP6O43824 516 aaPredicted RBP6.39□□□□□ -1.39
LINC01339-204ENST00000524094 KRTAP1-3Q8IUG1 177 aa6.39□□□□□ -1.39
LINC01339-204ENST00000524094 PPP1R18Q6NYC8 613 aa6.38□□□□□ -1.39
LINC01339-204ENST00000524094 BCL2L12Q9HB09 334 aa6.37□□□□□ -1.39
LINC01339-204ENST00000524094 PTCD2Q8WV60 388 aaKnown RBP6.36□□□□□ -1.39
LINC01339-204ENST00000524094 RIOK3O14730 519 aaKnown RBP6.35□□□□□ -1.39
LINC01339-204ENST00000524094 LCE2CQ5TA81 110 aa6.35□□□□□ -1.39
LINC01339-204ENST00000524094 TRIM67Q6ZTA4 783 aa6.35□□□□□ -1.39
LINC01339-204ENST00000524094 PTPREP23469 700 aa6.34□□□□□ -1.39
LINC01339-204ENST00000524094 TAOK2Q9UL54 1235 aa6.34□□□□□ -1.39
LINC01339-204ENST00000524094 BCANQ96GW7 911 aa6.33□□□□□ -1.4
LINC01339-204ENST00000524094 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.33□□□□□ -1.4
LINC01339-204ENST00000524094 ST8SIA5O15466 376 aa6.32□□□□□ -1.4
LINC01339-204ENST00000524094 ANO8Q9HCE9 1232 aaPredicted RBP6.32□□□□□ -1.4
LINC01339-204ENST00000524094 KCTD17Q8N5Z5 321 aa6.31□□□□□ -1.4
LINC01339-204ENST00000524094 TMC2Q8TDI7 906 aa6.31□□□□□ -1.4
LINC01339-204ENST00000524094 PSMG3-AS1Q96PY0 264 aa6.31□□□□□ -1.4
LINC01339-204ENST00000524094 AAASQ9NRG9 546 aa6.31□□□□□ -1.4
LINC01339-204ENST00000524094 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.29□□□□□ -1.4
LINC01339-204ENST00000524094 VGFO15240 615 aaPredicted RBP6.29□□□□□ -1.4
LINC01339-204ENST00000524094 ZNF454Q8N9F8 522 aa6.29□□□□□ -1.4
LINC01339-204ENST00000524094 ZFP91Q96JP5 570 aaPredicted RBP6.29□□□□□ -1.4
LINC01339-204ENST00000524094 FAM187AA6NFU0 413 aa6.28□□□□□ -1.4
LINC01339-204ENST00000524094 C11orf95C9JLR9 678 aaPredicted RBP6.27□□□□□ -1.41
LINC01339-204ENST00000524094 STK25O00506 426 aa6.26□□□□□ -1.41
LINC01339-204ENST00000524094 TJAP1Q5JTD0 557 aa6.26□□□□□ -1.41
LINC01339-204ENST00000524094 ZSCAN1Q8NBB4 408 aa6.26□□□□□ -1.41
LINC01339-204ENST00000524094 RABGEF1Q9UJ41 708 aa6.26□□□□□ -1.41
LINC01339-204ENST00000524094 TBC1D12O60347 775 aa6.25□□□□□ -1.41
LINC01339-204ENST00000524094 ZFRQ96KR1 1074 aaKnown RBP6.25□□□□□ -1.41
LINC01339-204ENST00000524094 BCL11BQ9C0K0 894 aaPredicted RBP6.25□□□□□ -1.41
LINC01339-204ENST00000524094 LORP23490 312 aaPredicted RBP6.24□□□□□ -1.41
LINC01339-204ENST00000524094 NLRP6P59044 892 aa6.24□□□□□ -1.41
LINC01339-204ENST00000524094 LAPTM4BQ86VI4 370 aa6.24□□□□□ -1.41
LINC01339-204ENST00000524094 TSR3Q9UJK0 312 aaKnown RBP6.24□□□□□ -1.41
LINC01339-204ENST00000524094 TERTO14746 1132 aaKnown RBP6.23□□□□□ -1.41
LINC01339-204ENST00000524094 PRR20EP86478 221 aa6.23□□□□□ -1.41
LINC01339-204ENST00000524094 PRR20CP86479 221 aa6.23□□□□□ -1.41
LINC01339-204ENST00000524094 PRR20DP86480 221 aa6.23□□□□□ -1.41
LINC01339-204ENST00000524094 PRR20BP86481 221 aa6.23□□□□□ -1.41
LINC01339-204ENST00000524094 PRR20AP86496 221 aa6.23□□□□□ -1.41
LINC01339-204ENST00000524094 GMPR2Q9P2T1 348 aaKnown RBP6.23□□□□□ -1.41
LINC01339-204ENST00000524094 CADPS2Q86UW7 1296 aa6.22□□□□□ -1.41
LINC01339-204ENST00000524094 DACH1Q9UI36 760 aa6.22□□□□□ -1.41
LINC01339-204ENST00000524094 HPS5Q9UPZ3 1129 aa6.22□□□□□ -1.41
LINC01339-204ENST00000524094 STK24Q9Y6E0 443 aa6.22□□□□□ -1.41
LINC01339-204ENST00000524094 TPRNQ4KMQ1 711 aa6.21□□□□□ -1.42
LINC01339-204ENST00000524094 FBXO22Q8NEZ5 403 aa6.21□□□□□ -1.42
LINC01339-204ENST00000524094 IL21Q9HBE4 155 aa6.19□□□□□ -1.42
LINC01339-204ENST00000524094 PROX2Q3B8N5 592 aa6.18□□□□□ -1.42
LINC01339-204ENST00000524094 LCE3BQ5TA77 95 aa6.18□□□□□ -1.42
LINC01339-204ENST00000524094 MFRPQ9BY79 579 aa6.18□□□□□ -1.42
LINC01339-204ENST00000524094 PPP1R37O75864 691 aa6.17□□□□□ -1.42
LINC01339-204ENST00000524094 FOSBP53539 338 aa6.17□□□□□ -1.42
LINC01339-204ENST00000524094 MTRQ99707 1265 aa6.17□□□□□ -1.42
LINC01339-204ENST00000524094 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.17□□□□□ -1.42
LINC01339-204ENST00000524094 GGCXP38435 758 aa6.16□□□□□ -1.42
LINC01339-204ENST00000524094 KCNMA1Q12791 1236 aa6.16□□□□□ -1.42
LINC01339-204ENST00000524094 SLC19A1P41440 591 aa6.15□□□□□ -1.42
LINC01339-204ENST00000524094 CRIPAKQ8N1N5 446 aa6.14□□□□□ -1.43
LINC01339-204ENST00000524094 ZNF516Q92618 1163 aa6.14□□□□□ -1.43
LINC01339-204ENST00000524094 LRCH3Q96II8 777 aa6.14□□□□□ -1.43
LINC01339-204ENST00000524094 GSK3AP49840 483 aa6.13□□□□□ -1.43
LINC01339-204ENST00000524094 ZNF598Q86UK7 904 aaKnown RBP6.13□□□□□ -1.43
LINC01339-204ENST00000524094 PLPP6Q8IY26 295 aa6.13□□□□□ -1.43
LINC01339-204ENST00000524094 ADAM33Q9BZ11 813 aa6.13□□□□□ -1.43
LINC01339-204ENST00000524094 TNFRSF10AO00220 468 aa6.12□□□□□ -1.43
LINC01339-204ENST00000524094 SPRYD7Q5W111 196 aa6.12□□□□□ -1.43
LINC01339-204ENST00000524094 PPP1R3GB7ZBB8 358 aa6.11□□□□□ -1.43
LINC01339-204ENST00000524094 GMPRP36959 345 aa6.11□□□□□ -1.43
LINC01339-204ENST00000524094 NKX2-3Q8TAU0 364 aa6.11□□□□□ -1.43
LINC01339-204ENST00000524094 TMUB1Q9BVT8 246 aa6.11□□□□□ -1.43
LINC01339-204ENST00000524094 KIAA1468Q9P260 1216 aa6.11□□□□□ -1.43
LINC01339-204ENST00000524094 KRTAP4-8A0A0G2JLE6 195 aa6.1□□□□□ -1.43
LINC01339-204ENST00000524094 GDF9O60383 454 aa6.1□□□□□ -1.43
LINC01339-204ENST00000524094 PPP4CP60510 307 aa6.1□□□□□ -1.43
LINC01339-204ENST00000524094 TMEM151AQ8N4L1 468 aa6.1□□□□□ -1.43
LINC01339-204ENST00000524094 ZDHHC16Q969W1 377 aa6.1□□□□□ -1.43
LINC01339-204ENST00000524094 EMID1Q96A84 441 aaPredicted RBP6.1□□□□□ -1.43
LINC01339-204ENST00000524094 KRTAP9-9Q9BYP9 154 aa6.1□□□□□ -1.43
LINC01339-204ENST00000524094 KRTAP9-4Q9BYQ2 154 aa6.1□□□□□ -1.43
LINC01339-204ENST00000524094 SEPT9Q9UHD8 586 aaPredicted RBP6.1□□□□□ -1.43
LINC01339-204ENST00000524094 AXIN1O15169 862 aa6.08□□□□□ -1.44
LINC01339-204ENST00000524094 FOXK1P85037 733 aa6.08□□□□□ -1.44
LINC01339-204ENST00000524094 KCNV2Q8TDN2 545 aa6.08□□□□□ -1.44
LINC01339-204ENST00000524094 BTBD11A6QL63 1104 aa6.07□□□□□ -1.44
LINC01339-204ENST00000524094 ZNF697Q5TEC3 545 aa6.07□□□□□ -1.44
LINC01339-204ENST00000524094 SLC16A10Q8TF71 515 aa6.07□□□□□ -1.44
LINC01339-204ENST00000524094 GDF11O95390 407 aa6.06□□□□□ -1.44
LINC01339-204ENST00000524094 SNRPBP14678 240 aaKnown RBP6.06□□□□□ -1.44
LINC01339-204ENST00000524094 FAM98CQ17RN3 349 aaKnown RBP6.06□□□□□ -1.44
LINC01339-204ENST00000524094 JPH4Q96JJ6 628 aa6.06□□□□□ -1.44
LINC01339-204ENST00000524094 RYDENQ9NUL5 291 aaKnown RBP6.06□□□□□ -1.44
LINC01339-204ENST00000524094 NCKAP5LQ9HCH0 1330 aa6.04□□□□□ -1.44
LINC01339-204ENST00000524094 COL9A1P20849 921 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms