RNA–Protein interactions for RNA: ENST00000523768.5

TNPO1-213, Transcript of transportin 1, humanhuman

TSL 2 BASIC

Gene TNPO1, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-213ENST00000523768 DCAF11Q8TEB1 546 aa15.48■□□□□ 0.07
TNPO1-213ENST00000523768 CCDC144AA2RUR9 1427 aa15.47■□□□□ 0.07
TNPO1-213ENST00000523768 KDM2AQ9Y2K7 1162 aa15.47■□□□□ 0.07
TNPO1-213ENST00000523768 IQGAP3Q86VI3 1631 aa15.47■□□□□ 0.07
TNPO1-213ENST00000523768 UHRF1BP1LA0JNW5 1464 aa15.46■□□□□ 0.07
TNPO1-213ENST00000523768 PLA2R1Q13018 1463 aa15.46■□□□□ 0.07
TNPO1-213ENST00000523768 DUOX2Q9NRD8 1548 aa15.46■□□□□ 0.06
TNPO1-213ENST00000523768 PRAG1Q86YV5 1406 aa15.45■□□□□ 0.06
TNPO1-213ENST00000523768 ST20-MTHFSA0A0A6YYL1 179 aa15.45■□□□□ 0.06
TNPO1-213ENST00000523768 PLCH2O75038 1416 aa15.45■□□□□ 0.06
TNPO1-213ENST00000523768 TRPM1Q7Z4N2 1603 aa15.45■□□□□ 0.06
TNPO1-213ENST00000523768 CLASP1Q7Z460 1538 aa15.44■□□□□ 0.06
TNPO1-213ENST00000523768 MAGI2Q86UL8 1455 aa15.44■□□□□ 0.06
TNPO1-213ENST00000523768 POLR3GLQ9BT43 218 aa15.44■□□□□ 0.06
TNPO1-213ENST00000523768 ATP10AO60312 1499 aa15.43■□□□□ 0.06
TNPO1-213ENST00000523768 ERBINQ96RT1 1412 aa15.43■□□□□ 0.06
TNPO1-213ENST00000523768 KTN1Q86UP2 1357 aaKnown RBP15.43■□□□□ 0.06
TNPO1-213ENST00000523768 ZCCHC11Q5TAX3 1644 aaKnown RBP15.42■□□□□ 0.06
TNPO1-213ENST00000523768 GPRASP1Q5JY77 1395 aa15.42■□□□□ 0.06
TNPO1-213ENST00000523768 E9PCH4 1651 aa15.41■□□□□ 0.06
TNPO1-213ENST00000523768 EFCAB2Q5VUJ9 269 aa15.41■□□□□ 0.06
TNPO1-213ENST00000523768 A2MP01023 1474 aa15.4■□□□□ 0.06
TNPO1-213ENST00000523768 LAMC1P11047 1609 aa15.4■□□□□ 0.06
TNPO1-213ENST00000523768 IRX6P78412 446 aaPredicted RBP15.4■□□□□ 0.06
TNPO1-213ENST00000523768 ABCC1P33527 1531 aa15.39■□□□□ 0.06
TNPO1-213ENST00000523768 SMG6Q86US8 1419 aaKnown RBP15.39■□□□□ 0.05
TNPO1-213ENST00000523768 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.39■□□□□ 0.054e-9■■□□□ 12.1
TNPO1-213ENST00000523768 PPP4R2Q9NY27 417 aa15.39■□□□□ 0.05
TNPO1-213ENST00000523768 PNISRQ8TF01 805 aaKnown RBP15.38■□□□□ 0.05
TNPO1-213ENST00000523768 RBM19Q9Y4C8 960 aaKnown RBP15.38■□□□□ 0.05
TNPO1-213ENST00000523768 RALBP1Q15311 655 aa15.37■□□□□ 0.05
TNPO1-213ENST00000523768 BRD4O60885 1362 aaPredicted RBP15.37■□□□□ 0.05
TNPO1-213ENST00000523768 ARAP3Q8WWN8 1544 aa15.37■□□□□ 0.05
TNPO1-213ENST00000523768 EIF2AK4Q9P2K8 1649 aaKnown RBP15.36■□□□□ 0.05
TNPO1-213ENST00000523768 PRDM15P57071 1507 aaPredicted RBP15.36■□□□□ 0.05
TNPO1-213ENST00000523768 RGL3Q3MIN7 710 aa15.36■□□□□ 0.05
TNPO1-213ENST00000523768 MYBBP1AQ9BQG0 1328 aaKnown RBP15.35■□□□□ 0.05
TNPO1-213ENST00000523768 TMC1Q8TDI8 760 aa15.35■□□□□ 0.05
TNPO1-213ENST00000523768 TRAPPC8Q9Y2L5 1435 aa15.35■□□□□ 0.05
TNPO1-213ENST00000523768 LRPPRCP42704 1394 aaKnown RBP15.35■□□□□ 0.05
TNPO1-213ENST00000523768 RTEL1-TNFRSF6BF6WH68 1400 aa15.35■□□□□ 0.05
TNPO1-213ENST00000523768 NBPF1Q3BBV0 1214 aa15.34■□□□□ 0.05
TNPO1-213ENST00000523768 CNGB1Q14028 1251 aaPredicted RBP15.33■□□□□ 0.05
TNPO1-213ENST00000523768 NUDCQ9Y266 331 aa15.33■□□□□ 0.05
TNPO1-213ENST00000523768 COL17A1Q9UMD9 1497 aaPredicted RBP15.32■□□□□ 0.04
TNPO1-213ENST00000523768 RNF123Q5XPI4 1314 aa15.32■□□□□ 0.04
TNPO1-213ENST00000523768 TESK2Q96S53 571 aa15.3■□□□□ 0.04
TNPO1-213ENST00000523768 PARD3Q8TEW0 1356 aa15.3■□□□□ 0.04
TNPO1-213ENST00000523768 PER1O15534 1290 aaPredicted RBP15.3■□□□□ 0.04
TNPO1-213ENST00000523768 WASHC2CQ9Y4E1 1318 aa15.3■□□□□ 0.04
TNPO1-213ENST00000523768 SPAG9O60271 1321 aaKnown RBP15.29■□□□□ 0.04
TNPO1-213ENST00000523768 RNF17Q9BXT8 1623 aaKnown RBP15.29■□□□□ 0.04
TNPO1-213ENST00000523768 ZFYVE16Q7Z3T8 1539 aa15.29■□□□□ 0.04
TNPO1-213ENST00000523768 NLRP13Q86W25 1043 aa15.27■□□□□ 0.04
TNPO1-213ENST00000523768 DEPDC5O75140 1603 aa15.27■□□□□ 0.03
TNPO1-213ENST00000523768 TRPM2O94759 1503 aa15.26■□□□□ 0.03
TNPO1-213ENST00000523768 DISP3Q9P2K9 1392 aa15.26■□□□□ 0.03
TNPO1-213ENST00000523768 PTPRTO14522 1441 aa15.26■□□□□ 0.03
TNPO1-213ENST00000523768 WDR7Q9Y4E6 1490 aa15.26■□□□□ 0.03
TNPO1-213ENST00000523768 STAC3Q96MF2 364 aa15.26■□□□□ 0.03
TNPO1-213ENST00000523768 ANP32EQ9BTT0 268 aa15.26■□□□□ 0.03
TNPO1-213ENST00000523768 ABCA9Q8IUA7 1624 aa15.25■□□□□ 0.03
TNPO1-213ENST00000523768 AFAP1Q8N556 730 aa15.25■□□□□ 0.03
TNPO1-213ENST00000523768 TMF1P82094 1093 aa15.24■□□□□ 0.03
TNPO1-213ENST00000523768 MADDQ8WXG6 1647 aa15.23■□□□□ 0.03
TNPO1-213ENST00000523768 B4GALNT3Q6L9W6 998 aa15.23■□□□□ 0.03
TNPO1-213ENST00000523768 INO80Q9ULG1 1556 aaPredicted RBP15.23■□□□□ 0.03
TNPO1-213ENST00000523768 INSRP06213 1382 aa15.23■□□□□ 0.03
TNPO1-213ENST00000523768 VWDEQ8N2E2 1590 aa15.22■□□□□ 0.03
TNPO1-213ENST00000523768 CEP152O94986 1710 aa15.22■□□□□ 0.03
TNPO1-213ENST00000523768 SPHKAPQ2M3C7 1700 aa15.22■□□□□ 0.03
TNPO1-213ENST00000523768 TET3O43151 1660 aa15.22■□□□□ 0.03
TNPO1-213ENST00000523768 FANCAO15360 1455 aa15.22■□□□□ 0.03
TNPO1-213ENST00000523768 ATP7AQ04656 1500 aa15.22■□□□□ 0.03
TNPO1-213ENST00000523768 FANCIQ9NVI1 1328 aa15.21■□□□□ 0.03
TNPO1-213ENST00000523768 ZMYM4Q5VZL5 1548 aa15.21■□□□□ 0.03
TNPO1-213ENST00000523768 IQGAP1P46940 1657 aa15.21■□□□□ 0.02
TNPO1-213ENST00000523768 SCAPERQ9BY12 1400 aa15.2■□□□□ 0.02
TNPO1-213ENST00000523768 PANK3Q9H999 370 aa15.2■□□□□ 0.02
TNPO1-213ENST00000523768 NEURL4Q96JN8 1562 aa15.2■□□□□ 0.02
TNPO1-213ENST00000523768 CLTCL1P53675 1640 aa15.19■□□□□ 0.02
TNPO1-213ENST00000523768 KANK1Q14678 1352 aa15.19■□□□□ 0.02
TNPO1-213ENST00000523768 PDE3BQ13370 1112 aa15.18■□□□□ 0.02
TNPO1-213ENST00000523768 SCAF11Q99590 1463 aaKnown RBP15.17■□□□□ 0.02
TNPO1-213ENST00000523768 ADGRL1O94910 1474 aa15.17■□□□□ 0.02
TNPO1-213ENST00000523768 CC2D1BQ5T0F9 858 aaKnown RBP15.15■□□□□ 0.02
TNPO1-213ENST00000523768 KIAA1210Q9ULL0 1709 aa15.15■□□□□ 0.02
TNPO1-213ENST00000523768 BLMP54132 1417 aaPredicted RBP15.15■□□□□ 0.02
TNPO1-213ENST00000523768 MROH1Q8NDA8 1641 aa15.14■□□□□ 0.02
TNPO1-213ENST00000523768 SENP3-EIF4A1A0A087X0R7 540 aa15.14■□□□□ 0.01
TNPO1-213ENST00000523768 KIF3BO15066 747 aa15.13■□□□□ 0.01
TNPO1-213ENST00000523768 CDCA8Q53HL2 280 aa15.13■□□□□ 0.01
TNPO1-213ENST00000523768 ASXL2Q76L83 1435 aa15.13■□□□□ 0.01
TNPO1-213ENST00000523768 SYNMO15061 1565 aa15.12■□□□□ 0.01
TNPO1-213ENST00000523768 MSH5O43196 834 aa15.12■□□□□ 0.01
TNPO1-213ENST00000523768 CCDC136Q96JN2 1154 aa15.12■□□□□ 0.01
TNPO1-213ENST00000523768 RRP1P56182 461 aaKnown RBP15.11■□□□□ 0.01
TNPO1-213ENST00000523768 MYOM2P54296 1465 aa15.1■□□□□ 0.01
TNPO1-213ENST00000523768 EIF3AQ14152 1382 aaKnown RBP15.1■□□□□ 0.01
TNPO1-213ENST00000523768 RCAN3Q9UKA8 241 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms