RNA–Protein interactions for RNA: ENST00000523752.5

TNFRSF10B-208, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 1 (best)

Gene TNFRSF10B, Length 3,328 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-208ENST00000523752 AEBP2Q6ZN18 517 aaPredicted RBP10.87□□□□□ -0.67
TNFRSF10B-208ENST00000523752 DCAF11Q8TEB1 546 aa10.87□□□□□ -0.67
TNFRSF10B-208ENST00000523752 E9PCH4 1651 aa10.86□□□□□ -0.67
TNFRSF10B-208ENST00000523752 SAMD9LQ8IVG5 1584 aa10.85□□□□□ -0.67
TNFRSF10B-208ENST00000523752 PTPRGP23470 1445 aa10.85□□□□□ -0.67
TNFRSF10B-208ENST00000523752 ARID4BQ4LE39 1312 aaPredicted RBP10.85□□□□□ -0.67
TNFRSF10B-208ENST00000523752 TMC1Q8TDI8 760 aa10.85□□□□□ -0.67
TNFRSF10B-208ENST00000523752 CDC42BPBQ9Y5S2 1711 aa10.85□□□□□ -0.67
TNFRSF10B-208ENST00000523752 RNF123Q5XPI4 1314 aa10.84□□□□□ -0.67
TNFRSF10B-208ENST00000523752 TSPY4P0CV99 314 aa10.84□□□□□ -0.67
TNFRSF10B-208ENST00000523752 TSPY10P0CW01 314 aa10.84□□□□□ -0.67
TNFRSF10B-208ENST00000523752 FAM135AQ9P2D6 1515 aa10.84□□□□□ -0.67
TNFRSF10B-208ENST00000523752 ROCK2O75116 1388 aaKnown RBP10.83□□□□□ -0.68
TNFRSF10B-208ENST00000523752 ARHGEF5Q12774 1597 aa10.83□□□□□ -0.68
TNFRSF10B-208ENST00000523752 LRPPRCP42704 1394 aaKnown RBP10.82□□□□□ -0.68
TNFRSF10B-208ENST00000523752 TRPM1Q7Z4N2 1603 aa10.82□□□□□ -0.68
TNFRSF10B-208ENST00000523752 PREX2Q70Z35 1606 aa10.81□□□□□ -0.68
TNFRSF10B-208ENST00000523752 NBPF1Q3BBV0 1214 aa10.81□□□□□ -0.68
TNFRSF10B-208ENST00000523752 BCL11AQ9H165 835 aa10.81□□□□□ -0.68
TNFRSF10B-208ENST00000523752 CCDC141Q6ZP82 1450 aa10.81□□□□□ -0.68
TNFRSF10B-208ENST00000523752 RGL3Q3MIN7 710 aa10.81□□□□□ -0.68
TNFRSF10B-208ENST00000523752 SYCP2Q9BX26 1530 aa10.8□□□□□ -0.68
TNFRSF10B-208ENST00000523752 CCDC136Q96JN2 1154 aa10.8□□□□□ -0.68
TNFRSF10B-208ENST00000523752 SALL2Q9Y467 1007 aaPredicted RBP10.8□□□□□ -0.68
TNFRSF10B-208ENST00000523752 PRAG1Q86YV5 1406 aa10.8□□□□□ -0.68
TNFRSF10B-208ENST00000523752 MYBBP1AQ9BQG0 1328 aaKnown RBP10.8□□□□□ -0.68
TNFRSF10B-208ENST00000523752 PLA2R1Q13018 1463 aa10.8□□□□□ -0.68
TNFRSF10B-208ENST00000523752 TTC37Q6PGP7 1564 aa10.79□□□□□ -0.68
TNFRSF10B-208ENST00000523752 BRD4O60885 1362 aaPredicted RBP10.78□□□□□ -0.68
TNFRSF10B-208ENST00000523752 CCDC144AA2RUR9 1427 aa10.78□□□□□ -0.68
TNFRSF10B-208ENST00000523752 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.78□□□□□ -0.68
TNFRSF10B-208ENST00000523752 A2MP01023 1474 aa10.78□□□□□ -0.68
TNFRSF10B-208ENST00000523752 PAK3O75914 559 aaPredicted RBP10.78□□□□□ -0.68
TNFRSF10B-208ENST00000523752 MYO5CQ9NQX4 1742 aa10.77□□□□□ -0.68
TNFRSF10B-208ENST00000523752 RALBP1Q15311 655 aa10.76□□□□□ -0.69
TNFRSF10B-208ENST00000523752 PARD3Q8TEW0 1356 aa10.76□□□□□ -0.69
TNFRSF10B-208ENST00000523752 DISP3Q9P2K9 1392 aa10.76□□□□□ -0.69
TNFRSF10B-208ENST00000523752 UNC13BO14795 1591 aa10.76□□□□□ -0.69
TNFRSF10B-208ENST00000523752 CHD1O14646 1710 aa10.76□□□□□ -0.69
TNFRSF10B-208ENST00000523752 ARHGAP5Q13017 1502 aa10.75□□□□□ -0.69
TNFRSF10B-208ENST00000523752 PER1O15534 1290 aaPredicted RBP10.75□□□□□ -0.69
TNFRSF10B-208ENST00000523752 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.75□□□□□ -0.69
TNFRSF10B-208ENST00000523752 PLEKHH2Q8IVE3 1493 aa10.74□□□□□ -0.69
TNFRSF10B-208ENST00000523752 RRP1P56182 461 aaKnown RBP10.74□□□□□ -0.69
TNFRSF10B-208ENST00000523752 CC2D1BQ5T0F9 858 aaKnown RBP10.74□□□□□ -0.69
TNFRSF10B-208ENST00000523752 EXOC6Q8TAG9 804 aa10.74□□□□□ -0.69
TNFRSF10B-208ENST00000523752 COL17A1Q9UMD9 1497 aaPredicted RBP10.74□□□□□ -0.69
TNFRSF10B-208ENST00000523752 KTN1Q86UP2 1357 aaKnown RBP10.74□□□□□ -0.69
TNFRSF10B-208ENST00000523752 CDCA7LQ96GN5 454 aa10.74□□□□□ -0.69
TNFRSF10B-208ENST00000523752 TESK2Q96S53 571 aa10.74□□□□□ -0.69
TNFRSF10B-208ENST00000523752 PRDM15P57071 1507 aaPredicted RBP10.74□□□□□ -0.69
TNFRSF10B-208ENST00000523752 NLRP13Q86W25 1043 aa10.73□□□□□ -0.69
TNFRSF10B-208ENST00000523752 ERCC6L2Q5T890 1561 aa10.73□□□□□ -0.69
TNFRSF10B-208ENST00000523752 NOP58Q9Y2X3 529 aaKnown RBP10.73□□□□□ -0.69
TNFRSF10B-208ENST00000523752 GPRASP1Q5JY77 1395 aa10.73□□□□□ -0.69
TNFRSF10B-208ENST00000523752 IQGAP3Q86VI3 1631 aa10.73□□□□□ -0.69
TNFRSF10B-208ENST00000523752 MAST1Q9Y2H9 1570 aa10.72□□□□□ -0.69
TNFRSF10B-208ENST00000523752 RCAN3Q9UKA8 241 aa10.72□□□□□ -0.69
TNFRSF10B-208ENST00000523752 PLXNC1O60486 1568 aa10.7□□□□□ -0.7
TNFRSF10B-208ENST00000523752 NBR1Q14596 966 aa10.7□□□□□ -0.7
TNFRSF10B-208ENST00000523752 PANK3Q9H999 370 aa10.7□□□□□ -0.7
TNFRSF10B-208ENST00000523752 LAMC1P11047 1609 aa10.7□□□□□ -0.7
TNFRSF10B-208ENST00000523752 ERBINQ96RT1 1412 aa10.7□□□□□ -0.7
TNFRSF10B-208ENST00000523752 PLIN1O60240 522 aa10.69□□□□□ -0.7
TNFRSF10B-208ENST00000523752 DAXXQ9UER7 740 aaPredicted RBP10.69□□□□□ -0.7
TNFRSF10B-208ENST00000523752 RSPH4AQ5TD94 716 aa10.69□□□□□ -0.7
TNFRSF10B-208ENST00000523752 SKAP1Q86WV1 359 aa10.68□□□□□ -0.7
TNFRSF10B-208ENST00000523752 RNF17Q9BXT8 1623 aaKnown RBP10.68□□□□□ -0.7
TNFRSF10B-208ENST00000523752 MAGI2Q86UL8 1455 aa10.68□□□□□ -0.7
TNFRSF10B-208ENST00000523752 MYT1LQ9UL68 1186 aa10.68□□□□□ -0.7
TNFRSF10B-208ENST00000523752 BLMP54132 1417 aaPredicted RBP10.67□□□□□ -0.7
TNFRSF10B-208ENST00000523752 SHROOM2Q13796 1616 aa10.67□□□□□ -0.7
TNFRSF10B-208ENST00000523752 EIF2AK4Q9P2K8 1649 aaKnown RBP10.67□□□□□ -0.7
TNFRSF10B-208ENST00000523752 IPO9Q96P70 1041 aaKnown RBP10.67□□□□□ -0.7
TNFRSF10B-208ENST00000523752 DUOX2Q9NRD8 1548 aa10.66□□□□□ -0.7
TNFRSF10B-208ENST00000523752 ANP32AP39687 249 aaKnown RBP10.66□□□□□ -0.7
TNFRSF10B-208ENST00000523752 ABCC2Q92887 1545 aa10.66□□□□□ -0.7
TNFRSF10B-208ENST00000523752 ATP10AO60312 1499 aa10.65□□□□□ -0.7
TNFRSF10B-208ENST00000523752 DEKP35659 375 aaKnown RBP10.65□□□□□ -0.7
TNFRSF10B-208ENST00000523752 NPM2Q86SE8 214 aaKnown RBP10.64□□□□□ -0.71
TNFRSF10B-208ENST00000523752 WDR7Q9Y4E6 1490 aa10.64□□□□□ -0.71
TNFRSF10B-208ENST00000523752 TRAPPC8Q9Y2L5 1435 aa10.64□□□□□ -0.71
TNFRSF10B-208ENST00000523752 MADDQ8WXG6 1647 aa10.64□□□□□ -0.71
TNFRSF10B-208ENST00000523752 TMF1P82094 1093 aa10.64□□□□□ -0.71
TNFRSF10B-208ENST00000523752 PDE3BQ13370 1112 aa10.64□□□□□ -0.71
TNFRSF10B-208ENST00000523752 CLASP1Q7Z460 1538 aa10.64□□□□□ -0.71
TNFRSF10B-208ENST00000523752 ADAMTS8Q9UP79 889 aa10.63□□□□□ -0.71
TNFRSF10B-208ENST00000523752 C20orf194Q5TEA3 1177 aa10.63□□□□□ -0.71
TNFRSF10B-208ENST00000523752 ZMYM4Q5VZL5 1548 aa10.63□□□□□ -0.71
TNFRSF10B-208ENST00000523752 IQGAP1P46940 1657 aa10.63□□□□□ -0.71
TNFRSF10B-208ENST00000523752 CRBNQ96SW2 442 aa10.63□□□□□ -0.71
TNFRSF10B-208ENST00000523752 ABCC1P33527 1531 aa10.62□□□□□ -0.71
TNFRSF10B-208ENST00000523752 ZCCHC11Q5TAX3 1644 aaKnown RBP10.62□□□□□ -0.71
TNFRSF10B-208ENST00000523752 WASHC2CQ9Y4E1 1318 aa10.62□□□□□ -0.71
TNFRSF10B-208ENST00000523752 PLEKHH1Q9ULM0 1364 aa10.61□□□□□ -0.71
TNFRSF10B-208ENST00000523752 PLCH2O75038 1416 aa10.61□□□□□ -0.71
TNFRSF10B-208ENST00000523752 PDE4AP27815 886 aa10.61□□□□□ -0.71
TNFRSF10B-208ENST00000523752 ZBTB47Q9UFB7 747 aaPredicted RBP10.61□□□□□ -0.71
TNFRSF10B-208ENST00000523752 SPHKAPQ2M3C7 1700 aa10.6□□□□□ -0.71
TNFRSF10B-208ENST00000523752 CLTCL1P53675 1640 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms