RNA–Protein interactions for RNA: ENST00000523742.1

LINC01947-201, Transcript of long intergenic non-protein coding RNA 1947, humanhuman

TSL 4 BASIC

Gene LINC01947, Length 566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01947-201ENST00000523742 CRISPLD2Q9H0B8 497 aa11.72□□□□□ -0.53
LINC01947-201ENST00000523742 PKD2Q13563 968 aa11.71□□□□□ -0.53
LINC01947-201ENST00000523742 NYAP1Q6ZVC0 841 aa11.71□□□□□ -0.53
LINC01947-201ENST00000523742 LAPTM4BQ86VI4 370 aa11.69□□□□□ -0.54
LINC01947-201ENST00000523742 PRKD2Q9BZL6 878 aa11.69□□□□□ -0.54
LINC01947-201ENST00000523742 KIAA1468Q9P260 1216 aa11.69□□□□□ -0.54
LINC01947-201ENST00000523742 SEPT9Q9UHD8 586 aaPredicted RBP11.68□□□□□ -0.54
LINC01947-201ENST00000523742 PCDHGA10Q9Y5H3 936 aa11.68□□□□□ -0.54
LINC01947-201ENST00000523742 NCKAP5LQ9HCH0 1330 aa11.64□□□□□ -0.55
LINC01947-201ENST00000523742 DCAF8L2P0C7V8 631 aa11.63□□□□□ -0.55
LINC01947-201ENST00000523742 RB1CC1Q8TDY2 1594 aa11.62□□□□□ -0.55
LINC01947-201ENST00000523742 HPS5Q9UPZ3 1129 aa11.62□□□□□ -0.55
LINC01947-201ENST00000523742 TSR3Q9UJK0 312 aaKnown RBP11.61□□□□□ -0.55
LINC01947-201ENST00000523742 TJAP1Q5JTD0 557 aa11.58□□□□□ -0.56
LINC01947-201ENST00000523742 PPP1R18Q6NYC8 613 aa11.57□□□□□ -0.56
LINC01947-201ENST00000523742 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.57□□□□□ -0.56
LINC01947-201ENST00000523742 NACADO15069 1562 aa11.54□□□□□ -0.56
LINC01947-201ENST00000523742 FAM98CQ17RN3 349 aaKnown RBP11.54□□□□□ -0.56
LINC01947-201ENST00000523742 HS6ST3Q8IZP7 471 aa11.54□□□□□ -0.56
LINC01947-201ENST00000523742 LRCH3Q96II8 777 aa11.54□□□□□ -0.56
LINC01947-201ENST00000523742 PDZRN3Q9UPQ7 1066 aa11.54□□□□□ -0.56
LINC01947-201ENST00000523742 V9GY48 417 aaPredicted RBP11.54□□□□□ -0.56
LINC01947-201ENST00000523742 MAP3K9P80192 1104 aa11.53□□□□□ -0.56
LINC01947-201ENST00000523742 NKX1-1Q15270 411 aaPredicted RBP11.53□□□□□ -0.56
LINC01947-201ENST00000523742 EMILIN3Q9NT22 766 aa11.53□□□□□ -0.56
LINC01947-201ENST00000523742 ONECUT3O60422 494 aaPredicted RBP11.52□□□□□ -0.57
LINC01947-201ENST00000523742 TYW1BQ6NUM6 668 aa11.52□□□□□ -0.57
LINC01947-201ENST00000523742 TRIM6-TRIM34B2RNG4 842 aa11.51□□□□□ -0.57
LINC01947-201ENST00000523742 POTECB2RU33 542 aa11.51□□□□□ -0.57
LINC01947-201ENST00000523742 PHF14O94880 888 aa11.48□□□□□ -0.57
LINC01947-201ENST00000523742 PDE4AP27815 886 aa11.48□□□□□ -0.57
LINC01947-201ENST00000523742 C6orf132Q5T0Z8 1188 aa11.48□□□□□ -0.57
LINC01947-201ENST00000523742 ZNF516Q92618 1163 aa11.48□□□□□ -0.57
LINC01947-201ENST00000523742 FBXW7Q969H0 707 aa11.48□□□□□ -0.57
LINC01947-201ENST00000523742 MTRQ99707 1265 aa11.48□□□□□ -0.57
LINC01947-201ENST00000523742 PPP4CP60510 307 aa11.44□□□□□ -0.58
LINC01947-201ENST00000523742 LARP6Q9BRS8 491 aaKnown RBP11.44□□□□□ -0.58
LINC01947-201ENST00000523742 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.44□□□□□ -0.58
LINC01947-201ENST00000523742 TRIM67Q6ZTA4 783 aa11.42□□□□□ -0.58
LINC01947-201ENST00000523742 NKX2-3Q8TAU0 364 aa11.42□□□□□ -0.58
LINC01947-201ENST00000523742 DDX27Q96GQ7 796 aaKnown RBP11.42□□□□□ -0.58
LINC01947-201ENST00000523742 LCE2AQ5TA79 106 aaPredicted RBP11.41□□□□□ -0.58
LINC01947-201ENST00000523742 IL21Q9HBE4 155 aa11.41□□□□□ -0.58
LINC01947-201ENST00000523742 TSKSQ9UJT2 592 aa11.41□□□□□ -0.58
LINC01947-201ENST00000523742 CHGAP10645 457 aaKnown RBP11.38□□□□□ -0.59
LINC01947-201ENST00000523742 MYT1Q01538 1121 aa11.38□□□□□ -0.59
LINC01947-201ENST00000523742 MFSD10Q14728 455 aa11.38□□□□□ -0.59
LINC01947-201ENST00000523742 SAMD7Q7Z3H4 446 aa11.38□□□□□ -0.59
LINC01947-201ENST00000523742 RBM33Q96EV2 1170 aaKnown RBP11.38□□□□□ -0.59
LINC01947-201ENST00000523742 MYO15BQ96JP2 1530 aa11.36□□□□□ -0.59
LINC01947-201ENST00000523742 SMAPO00193 183 aa11.36□□□□□ -0.59
LINC01947-201ENST00000523742 C3orf80F5H4A9 247 aa11.35□□□□□ -0.59
LINC01947-201ENST00000523742 EMID1Q96A84 441 aaPredicted RBP11.33□□□□□ -0.6
LINC01947-201ENST00000523742 EPAS1Q99814 870 aa11.33□□□□□ -0.6
LINC01947-201ENST00000523742 TREML4Q6UXN2 200 aa11.32□□□□□ -0.6
LINC01947-201ENST00000523742 DNAJC5Q9H3Z4 198 aa11.32□□□□□ -0.6
LINC01947-201ENST00000523742 APLP1P51693 650 aa11.31□□□□□ -0.6
LINC01947-201ENST00000523742 FAM198AQ9UFP1 575 aa11.31□□□□□ -0.6
LINC01947-201ENST00000523742 TSR1Q2NL82 804 aaKnown RBP11.29□□□□□ -0.6
LINC01947-201ENST00000523742 PACS2Q86VP3 889 aa11.28□□□□□ -0.6
LINC01947-201ENST00000523742 PKDCCQ504Y2 493 aa11.27□□□□□ -0.61
LINC01947-201ENST00000523742 DDX12PQ92771 950 aa11.26□□□□□ -0.61
LINC01947-201ENST00000523742 DGAT1O75907 488 aa11.23□□□□□ -0.61
LINC01947-201ENST00000523742 DPYSL4O14531 572 aa11.22□□□□□ -0.61
LINC01947-201ENST00000523742 COPS2P61201 443 aa11.22□□□□□ -0.61
LINC01947-201ENST00000523742 RYDENQ9NUL5 291 aaKnown RBP11.22□□□□□ -0.61
LINC01947-201ENST00000523742 DCAF1Q9Y4B6 1507 aa11.21□□□□□ -0.61
LINC01947-201ENST00000523742 ST8SIA5O15466 376 aa11.21□□□□□ -0.61
LINC01947-201ENST00000523742 ZCCHC6Q5VYS8 1495 aaKnown RBP11.2□□□□□ -0.62
LINC01947-201ENST00000523742 GTPBP6O43824 516 aaPredicted RBP11.2□□□□□ -0.62
LINC01947-201ENST00000523742 RNF40O75150 1001 aa11.2□□□□□ -0.62
LINC01947-201ENST00000523742 EN1Q05925 392 aaPredicted RBP11.2□□□□□ -0.62
LINC01947-201ENST00000523742 CADPS2Q86UW7 1296 aa11.2□□□□□ -0.62
LINC01947-201ENST00000523742 CDCA7LQ96GN5 454 aa11.2□□□□□ -0.62
LINC01947-201ENST00000523742 UNC13AQ9UPW8 1703 aa11.19□□□□□ -0.62
LINC01947-201ENST00000523742 SLC19A1P41440 591 aa11.19□□□□□ -0.62
LINC01947-201ENST00000523742 GGCXP38435 758 aa11.18□□□□□ -0.62
LINC01947-201ENST00000523742 TMUB1Q9BVT8 246 aa11.18□□□□□ -0.62
LINC01947-201ENST00000523742 BICRAQ9NZM4 1560 aa11.17□□□□□ -0.62
LINC01947-201ENST00000523742 RNF223E7ERA6 249 aa11.17□□□□□ -0.62
LINC01947-201ENST00000523742 TATDN2Q93075 761 aa11.17□□□□□ -0.62
LINC01947-201ENST00000523742 MAP3K7O43318 606 aa11.16□□□□□ -0.62
LINC01947-201ENST00000523742 PRR20EP86478 221 aa11.16□□□□□ -0.62
LINC01947-201ENST00000523742 PRR20CP86479 221 aa11.16□□□□□ -0.62
LINC01947-201ENST00000523742 PRR20DP86480 221 aa11.16□□□□□ -0.62
LINC01947-201ENST00000523742 PRR20BP86481 221 aa11.16□□□□□ -0.62
LINC01947-201ENST00000523742 PRR20AP86496 221 aa11.16□□□□□ -0.62
LINC01947-201ENST00000523742 SPRYD7Q5W111 196 aa11.16□□□□□ -0.62
LINC01947-201ENST00000523742 LOC100996750A0A140TA64 210 aa11.15□□□□□ -0.62
LINC01947-201ENST00000523742 FAM187AA6NFU0 413 aa11.15□□□□□ -0.62
LINC01947-201ENST00000523742 PRSS12P56730 875 aa11.15□□□□□ -0.62
LINC01947-201ENST00000523742 CAMK2BQ13554 666 aa11.15□□□□□ -0.62
LINC01947-201ENST00000523742 NBR1Q14596 966 aa11.15□□□□□ -0.62
LINC01947-201ENST00000523742 KRTAP4-6Q9BYQ5 205 aa11.15□□□□□ -0.62
LINC01947-201ENST00000523742 AAASQ9NRG9 546 aa11.15□□□□□ -0.62
LINC01947-201ENST00000523742 PNMA3Q9UL41 463 aa11.15□□□□□ -0.62
LINC01947-201ENST00000523742 SHROOM4Q9ULL8 1493 aa11.14□□□□□ -0.63
LINC01947-201ENST00000523742 PRIM1P49642 420 aaKnown RBP11.14□□□□□ -0.63
LINC01947-201ENST00000523742 TNFRSF10AO00220 468 aa11.13□□□□□ -0.63
LINC01947-201ENST00000523742 ZPR1O75312 459 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms