RNA–Protein interactions for RNA: ENST00000523465.1

POLB-214, Transcript of DNA polymerase beta, humanhuman

TSL 3

Gene POLB, Length 649 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-214ENST00000523465 HOXB3P14651 431 aaPredicted RBP12.67□□□□□ -0.38
POLB-214ENST00000523465 ZNF710Q8N1W2 664 aa12.66□□□□□ -0.38
POLB-214ENST00000523465 ZC3H15Q8WU90 426 aaKnown RBP12.66□□□□□ -0.38
POLB-214ENST00000523465 DDX12PQ92771 950 aa12.66□□□□□ -0.38
POLB-214ENST00000523465 GPIHBP1Q8IV16 184 aa12.64□□□□□ -0.39
POLB-214ENST00000523465 PRDM2Q13029 1718 aa12.64□□□□□ -0.39
POLB-214ENST00000523465 POTEMA6NI47 508 aa12.62□□□□□ -0.39
POLB-214ENST00000523465 OSBPP22059 807 aa12.62□□□□□ -0.39
POLB-214ENST00000523465 ARSIQ5FYB1 569 aa12.61□□□□□ -0.39
POLB-214ENST00000523465 KDM4FA0A1W2PPD8 638 aa12.6□□□□□ -0.39
POLB-214ENST00000523465 PHF14O94880 888 aa12.6□□□□□ -0.39
POLB-214ENST00000523465 GPR153Q6NV75 609 aa12.6□□□□□ -0.39
POLB-214ENST00000523465 EPAS1Q99814 870 aa12.6□□□□□ -0.39
POLB-214ENST00000523465 POTEGQ6S5H5 508 aa12.59□□□□□ -0.39
POLB-214ENST00000523465 LCE2DQ5TA82 110 aaPredicted RBP12.58□□□□□ -0.4
POLB-214ENST00000523465 NUTM2FA1L443 756 aa12.57□□□□□ -0.4
POLB-214ENST00000523465 ZMYND10O75800 440 aa12.57□□□□□ -0.4
POLB-214ENST00000523465 NUDT7P0C024 238 aa12.57□□□□□ -0.4
POLB-214ENST00000523465 JPH4Q96JJ6 628 aa12.56□□□□□ -0.4
POLB-214ENST00000523465 ZNF608Q9ULD9 1512 aaPredicted RBP12.56□□□□□ -0.4
POLB-214ENST00000523465 CCDC88BA6NC98 1476 aa12.55□□□□□ -0.4
POLB-214ENST00000523465 TYW1BQ6NUM6 668 aa12.55□□□□□ -0.4
POLB-214ENST00000523465 KHSRPQ92945 711 aaKnown RBP eCLIP12.55□□□□□ -0.4
POLB-214ENST00000523465 PLSCR2Q9NRY7 297 aa12.55□□□□□ -0.4
POLB-214ENST00000523465 RIMBP3CA6NJZ7 1639 aa12.55□□□□□ -0.4
POLB-214ENST00000523465 RIMBP3BA6NNM3 1639 aa12.55□□□□□ -0.4
POLB-214ENST00000523465 RIMBP3Q9UFD9 1639 aa12.55□□□□□ -0.4
POLB-214ENST00000523465 FBXW7Q969H0 707 aa12.54□□□□□ -0.4
POLB-214ENST00000523465 PCDHGA10Q9Y5H3 936 aa12.54□□□□□ -0.4
POLB-214ENST00000523465 BARGINQ6ZT62 677 aa12.53□□□□□ -0.4
POLB-214ENST00000523465 EN1Q05925 392 aaPredicted RBP12.52□□□□□ -0.41
POLB-214ENST00000523465 IFT140Q96RY7 1462 aa12.52□□□□□ -0.41
POLB-214ENST00000523465 HOXB1P14653 301 aaPredicted RBP12.51□□□□□ -0.41
POLB-214ENST00000523465 FOSBP53539 338 aa12.51□□□□□ -0.41
POLB-214ENST00000523465 TOPBP1Q92547 1522 aa12.51□□□□□ -0.41
POLB-214ENST00000523465 PSDA5PKW4 1024 aaPredicted RBP12.5□□□□□ -0.41
POLB-214ENST00000523465 MAP3K7O43318 606 aa12.5□□□□□ -0.41
POLB-214ENST00000523465 FCHSD2O94868 740 aa12.5□□□□□ -0.41
POLB-214ENST00000523465 PRIM1P49642 420 aaKnown RBP12.5□□□□□ -0.41
POLB-214ENST00000523465 ZNF454Q8N9F8 522 aa12.5□□□□□ -0.41
POLB-214ENST00000523465 EIF4G3O43432 1585 aaKnown RBP12.49□□□□□ -0.41
POLB-214ENST00000523465 GPR37O15354 613 aa12.48□□□□□ -0.41
POLB-214ENST00000523465 KRI1Q8N9T8 703 aaKnown RBP12.48□□□□□ -0.41
POLB-214ENST00000523465 ZDHHC16Q969W1 377 aa12.48□□□□□ -0.41
POLB-214ENST00000523465 RBM33Q96EV2 1170 aaKnown RBP12.48□□□□□ -0.41
POLB-214ENST00000523465 SLC24A3Q9HC58 644 aa12.47□□□□□ -0.41
POLB-214ENST00000523465 LHX6Q9UPM6 363 aa12.47□□□□□ -0.41
POLB-214ENST00000523465 HIC1Q14526 733 aa12.46□□□□□ -0.41
POLB-214ENST00000523465 ARHGEF11O15085 1522 aa12.46□□□□□ -0.42
POLB-214ENST00000523465 CHD1O14646 1710 aa12.45□□□□□ -0.42
POLB-214ENST00000523465 DNMBPQ6XZF7 1577 aa12.45□□□□□ -0.42
POLB-214ENST00000523465 GNPATO15228 680 aa12.44□□□□□ -0.42
POLB-214ENST00000523465 PTGDRQ13258 359 aa12.44□□□□□ -0.42
POLB-214ENST00000523465 PPP4R3BQ5MIZ7 849 aa12.44□□□□□ -0.42
POLB-214ENST00000523465 FAM163AQ96GL9 167 aaPredicted RBP12.44□□□□□ -0.42
POLB-214ENST00000523465 AQRO60306 1485 aaKnown RBP eCLIP12.42□□□□□ -0.42
POLB-214ENST00000523465 ABCC8Q09428 1581 aa12.42□□□□□ -0.42
POLB-214ENST00000523465 TSR1Q2NL82 804 aaKnown RBP12.41□□□□□ -0.42
POLB-214ENST00000523465 C6orf132Q5T0Z8 1188 aa12.41□□□□□ -0.42
POLB-214ENST00000523465 AK7Q96M32 723 aa12.41□□□□□ -0.42
POLB-214ENST00000523465 TARBP1Q13395 1621 aaKnown RBP12.4□□□□□ -0.42
POLB-214ENST00000523465 CYB5RLQ6IPT4 315 aa12.4□□□□□ -0.42
POLB-214ENST00000523465 CERKQ8TCT0 537 aa12.4□□□□□ -0.42
POLB-214ENST00000523465 CDHR5Q9HBB8 845 aa12.4□□□□□ -0.42
POLB-214ENST00000523465 PCDH10Q9P2E7 1040 aa12.4□□□□□ -0.42
POLB-214ENST00000523465 MINK1Q8N4C8 1332 aaPredicted RBP12.39□□□□□ -0.43
POLB-214ENST00000523465 MAP2K5Q13163 448 aa12.39□□□□□ -0.43
POLB-214ENST00000523465 ADAM33Q9BZ11 813 aa12.39□□□□□ -0.43
POLB-214ENST00000523465 NPDC1Q9NQX5 325 aaPredicted RBP12.38□□□□□ -0.43
POLB-214ENST00000523465 POLA1P09884 1462 aaPredicted RBP12.37□□□□□ -0.43
POLB-214ENST00000523465 RAD54L2Q9Y4B4 1467 aa12.36□□□□□ -0.43
POLB-214ENST00000523465 BCL2L12Q9HB09 334 aa12.36□□□□□ -0.43
POLB-214ENST00000523465 IRF6O14896 467 aa12.34□□□□□ -0.43
POLB-214ENST00000523465 ST18O60284 1047 aa12.34□□□□□ -0.43
POLB-214ENST00000523465 ARAP1Q96P48 1450 aa12.34□□□□□ -0.43
POLB-214ENST00000523465 FECHP22830 423 aa12.33□□□□□ -0.44
POLB-214ENST00000523465 PTPREP23469 700 aa12.33□□□□□ -0.44
POLB-214ENST00000523465 ERBB3P21860 1342 aa12.33□□□□□ -0.44
POLB-214ENST00000523465 TDRD9Q8NDG6 1382 aaKnown RBP12.32□□□□□ -0.44
POLB-214ENST00000523465 SOGA1O94964 1423 aa12.31□□□□□ -0.44
POLB-214ENST00000523465 KCNH8Q96L42 1107 aa12.31□□□□□ -0.44
POLB-214ENST00000523465 SNAPC4Q5SXM2 1469 aa12.3□□□□□ -0.44
POLB-214ENST00000523465 TRIM66O15016 1216 aa12.3□□□□□ -0.44
POLB-214ENST00000523465 EMP3P54852 163 aa12.3□□□□□ -0.44
POLB-214ENST00000523465 CCDC102AQ96A19 550 aa12.3□□□□□ -0.44
POLB-214ENST00000523465 RBM27Q9P2N5 1060 aaKnown RBP12.3□□□□□ -0.44
POLB-214ENST00000523465 FGD5Q6ZNL6 1462 aa12.29□□□□□ -0.44
POLB-214ENST00000523465 PPP1R3GB7ZBB8 358 aa12.28□□□□□ -0.44
POLB-214ENST00000523465 BRPF1P55201 1214 aaPredicted RBP12.28□□□□□ -0.44
POLB-214ENST00000523465 NEUROD2Q15784 382 aa12.28□□□□□ -0.44
POLB-214ENST00000523465 PRSS12P56730 875 aa12.27□□□□□ -0.45
POLB-214ENST00000523465 VARS2Q5ST30 1063 aaKnown RBP12.27□□□□□ -0.45
POLB-214ENST00000523465 CDCA7LQ96GN5 454 aa12.26□□□□□ -0.45
POLB-214ENST00000523465 CUX1P39880 1505 aa12.26□□□□□ -0.45
POLB-214ENST00000523465 COL9A1P20849 921 aa12.25□□□□□ -0.45
POLB-214ENST00000523465 PADI6Q6TGC4 694 aa12.25□□□□□ -0.45
POLB-214ENST00000523465 MARVELD3Q96A59 401 aa12.25□□□□□ -0.45
POLB-214ENST00000523465 PDE4DQ08499 809 aa12.24□□□□□ -0.45
POLB-214ENST00000523465 TTC13Q8NBP0 860 aa12.24□□□□□ -0.45
POLB-214ENST00000523465 CHMP7Q8WUX9 453 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms