RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 KIF7Q2M1P5 1343 aa16.88■□□□□ 0.29
PCDHGB1-201ENST00000523390 C9orf84Q5VXU9 1444 aa16.88■□□□□ 0.29
PCDHGB1-201ENST00000523390 MYBBP1AQ9BQG0 1328 aaKnown RBP16.88■□□□□ 0.29
PCDHGB1-201ENST00000523390 MINK1Q8N4C8 1332 aaPredicted RBP16.87■□□□□ 0.29
PCDHGB1-201ENST00000523390 CUL7Q14999 1698 aa16.87■□□□□ 0.29
PCDHGB1-201ENST00000523390 PLB1Q6P1J6 1458 aa16.86■□□□□ 0.29
PCDHGB1-201ENST00000523390 CCDC7Q96M83 1385 aa16.86■□□□□ 0.29
PCDHGB1-201ENST00000523390 GRIN2AQ12879 1464 aa16.85■□□□□ 0.29
PCDHGB1-201ENST00000523390 MS4A1P11836 297 aa16.84■□□□□ 0.29
PCDHGB1-201ENST00000523390 NGDNQ8NEJ9 315 aaKnown RBP16.84■□□□□ 0.29
PCDHGB1-201ENST00000523390 NBPF8Q3BBV2 869 aa16.83■□□□□ 0.29
PCDHGB1-201ENST00000523390 DAPK1P53355 1430 aa16.83■□□□□ 0.28
PCDHGB1-201ENST00000523390 WASHC2AQ641Q2 1341 aa16.83■□□□□ 0.28
PCDHGB1-201ENST00000523390 SUPT6HQ7KZ85 1726 aaKnown RBP16.83■□□□□ 0.28
PCDHGB1-201ENST00000523390 GOLGA2Q08379 1002 aa16.82■□□□□ 0.28
PCDHGB1-201ENST00000523390 SCAPERQ9BY12 1400 aa16.82■□□□□ 0.28
PCDHGB1-201ENST00000523390 NAIPQ13075 1403 aa16.82■□□□□ 0.28
PCDHGB1-201ENST00000523390 RTF1Q92541 710 aaKnown RBP16.81■□□□□ 0.28
PCDHGB1-201ENST00000523390 RRP7AQ9Y3A4 280 aaKnown RBP16.81■□□□□ 0.28
PCDHGB1-201ENST00000523390 EVC2Q86UK5 1308 aa16.81■□□□□ 0.28
PCDHGB1-201ENST00000523390 TMEM132EQ6IEE7 984 aa16.81■□□□□ 0.28
PCDHGB1-201ENST00000523390 NBPF1Q3BBV0 1214 aa16.8■□□□□ 0.28
PCDHGB1-201ENST00000523390 DDRGK1Q96HY6 314 aa16.8■□□□□ 0.28
PCDHGB1-201ENST00000523390 CFAP70Q5T0N1 1121 aa16.79■□□□□ 0.28
PCDHGB1-201ENST00000523390 MAGI1Q96QZ7 1491 aaPredicted RBP16.79■□□□□ 0.28
PCDHGB1-201ENST00000523390 BECN1Q14457 450 aa16.79■□□□□ 0.28
PCDHGB1-201ENST00000523390 ARHGEF11O15085 1522 aa16.79■□□□□ 0.28
PCDHGB1-201ENST00000523390 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.78■□□□□ 0.28
PCDHGB1-201ENST00000523390 KIAA1107Q9UPP5 1409 aa16.78■□□□□ 0.28
PCDHGB1-201ENST00000523390 RAPGEF3O95398 923 aa16.78■□□□□ 0.28
PCDHGB1-201ENST00000523390 CENPJQ9HC77 1338 aaPredicted RBP16.78■□□□□ 0.28
PCDHGB1-201ENST00000523390 CHMP4BQ9H444 224 aaKnown RBP16.76■□□□□ 0.27
PCDHGB1-201ENST00000523390 CGNL1Q0VF96 1302 aa16.76■□□□□ 0.27
PCDHGB1-201ENST00000523390 PDE3BQ13370 1112 aa16.75■□□□□ 0.27
PCDHGB1-201ENST00000523390 CLUAP1Q96AJ1 413 aa16.75■□□□□ 0.27
PCDHGB1-201ENST00000523390 LTV1Q96GA3 475 aaPredicted RBP16.74■□□□□ 0.27
PCDHGB1-201ENST00000523390 ERICH6BQ5W0A0 696 aa16.74■□□□□ 0.27
PCDHGB1-201ENST00000523390 PLEKHH2Q8IVE3 1493 aa16.74■□□□□ 0.27
PCDHGB1-201ENST00000523390 STAC3Q96MF2 364 aa16.73■□□□□ 0.27
PCDHGB1-201ENST00000523390 CNTLNQ9NXG0 1405 aa16.73■□□□□ 0.27
PCDHGB1-201ENST00000523390 AMPHP49418 695 aa16.72■□□□□ 0.27
PCDHGB1-201ENST00000523390 APAF1O14727 1248 aa16.72■□□□□ 0.27
PCDHGB1-201ENST00000523390 IPO8O15397 1037 aaKnown RBP16.72■□□□□ 0.27
PCDHGB1-201ENST00000523390 CSB-PGBD3P0DP91 1061 aa16.72■□□□□ 0.27
PCDHGB1-201ENST00000523390 ZBED9Q6R2W3 1325 aa16.72■□□□□ 0.27
PCDHGB1-201ENST00000523390 SMC4Q9NTJ3 1288 aa16.72■□□□□ 0.27
PCDHGB1-201ENST00000523390 MAP3K1Q13233 1512 aa16.71■□□□□ 0.27
PCDHGB1-201ENST00000523390 CALD1Q05682 793 aaKnown RBP16.71■□□□□ 0.27
PCDHGB1-201ENST00000523390 ITPRIPQ8IWB1 547 aa16.71■□□□□ 0.27
PCDHGB1-201ENST00000523390 OS9Q13438 667 aaPredicted RBP16.71■□□□□ 0.27
PCDHGB1-201ENST00000523390 ANP32BQ92688 251 aaKnown RBP16.7■□□□□ 0.26
PCDHGB1-201ENST00000523390 ABCC5O15440 1437 aa16.7■□□□□ 0.26
PCDHGB1-201ENST00000523390 APBB1O00213 710 aa16.7■□□□□ 0.26
PCDHGB1-201ENST00000523390 PLIN1O60240 522 aa16.69■□□□□ 0.26
PCDHGB1-201ENST00000523390 WDR97A6NE52 1622 aa16.68■□□□□ 0.26
PCDHGB1-201ENST00000523390 ROCK1Q13464 1354 aa16.68■□□□□ 0.26
PCDHGB1-201ENST00000523390 CASC1Q6TDU7 716 aa16.68■□□□□ 0.26
PCDHGB1-201ENST00000523390 COG3Q96JB2 828 aa16.68■□□□□ 0.26
PCDHGB1-201ENST00000523390 BCL2L13Q9BXK5 485 aa16.68■□□□□ 0.26
PCDHGB1-201ENST00000523390 CABP2Q9NPB3 220 aa16.68■□□□□ 0.26
PCDHGB1-201ENST00000523390 PTPN23Q9H3S7 1636 aa16.68■□□□□ 0.26
PCDHGB1-201ENST00000523390 CAMSAP2Q08AD1 1489 aa16.68■□□□□ 0.26
PCDHGB1-201ENST00000523390 ELL2O00472 640 aaPredicted RBP16.65■□□□□ 0.26
PCDHGB1-201ENST00000523390 CCDC141Q6ZP82 1450 aa16.65■□□□□ 0.26
PCDHGB1-201ENST00000523390 GGNBP2Q9H3C7 697 aa16.65■□□□□ 0.26
PCDHGB1-201ENST00000523390 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.63■□□□□ 0.25
PCDHGB1-201ENST00000523390 NOP58Q9Y2X3 529 aaKnown RBP16.63■□□□□ 0.25
PCDHGB1-201ENST00000523390 THOC2Q8NI27 1593 aaKnown RBP16.62■□□□□ 0.25
PCDHGB1-201ENST00000523390 RWDD1Q9H446 243 aaPredicted RBP16.62■□□□□ 0.25
PCDHGB1-201ENST00000523390 NCOA1Q15788 1441 aa16.6■□□□□ 0.25
PCDHGB1-201ENST00000523390 EXOC6Q8TAG9 804 aa16.6■□□□□ 0.25
PCDHGB1-201ENST00000523390 STK31Q9BXU1 1019 aa16.6■□□□□ 0.25
PCDHGB1-201ENST00000523390 ANKRD30BQ9BXX2 1392 aa16.6■□□□□ 0.25
PCDHGB1-201ENST00000523390 LMOD3Q0VAK6 560 aa16.6■□□□□ 0.25
PCDHGB1-201ENST00000523390 DEKP35659 375 aaKnown RBP16.6■□□□□ 0.25
PCDHGB1-201ENST00000523390 DIAPH1O60610 1272 aaKnown RBP16.59■□□□□ 0.25
PCDHGB1-201ENST00000523390 E9PSI1 815 aa16.59■□□□□ 0.25
PCDHGB1-201ENST00000523390 RRP1P56182 461 aaKnown RBP16.59■□□□□ 0.25
PCDHGB1-201ENST00000523390 AKNAQ7Z591 1439 aa16.59■□□□□ 0.25
PCDHGB1-201ENST00000523390 ZNF330Q9Y3S2 320 aaPredicted RBP16.58■□□□□ 0.25
PCDHGB1-201ENST00000523390 SLC4A10Q6U841 1118 aa16.58■□□□□ 0.25
PCDHGB1-201ENST00000523390 SLC12A5Q9H2X9 1139 aa16.58■□□□□ 0.25
PCDHGB1-201ENST00000523390 TCERG1O14776 1098 aaKnown RBP16.58■□□□□ 0.24
PCDHGB1-201ENST00000523390 KIF14Q15058 1648 aa16.58■□□□□ 0.24
PCDHGB1-201ENST00000523390 ADAMTS8Q9UP79 889 aa16.57■□□□□ 0.24
PCDHGB1-201ENST00000523390 PRAM1Q96QH2 718 aa16.57■□□□□ 0.24
PCDHGB1-201ENST00000523390 CD109Q6YHK3 1445 aa16.57■□□□□ 0.24
PCDHGB1-201ENST00000523390 CCDC184Q52MB2 194 aa16.56■□□□□ 0.24
PCDHGB1-201ENST00000523390 MTHFSP49914 203 aa16.55■□□□□ 0.24
PCDHGB1-201ENST00000523390 CRBNQ96SW2 442 aa16.55■□□□□ 0.24
PCDHGB1-201ENST00000523390 TPRNQ4KMQ1 711 aa16.55■□□□□ 0.24
PCDHGB1-201ENST00000523390 TXNDC2Q86VQ3 553 aa16.55■□□□□ 0.24
PCDHGB1-201ENST00000523390 SLC52A1Q9NWF4 448 aa16.55■□□□□ 0.24
PCDHGB1-201ENST00000523390 NPHP1O15259 732 aa16.55■□□□□ 0.24
PCDHGB1-201ENST00000523390 GOLGA6L22H0YM25 854 aa16.55■□□□□ 0.24
PCDHGB1-201ENST00000523390 PTPRKQ15262 1439 aa16.54■□□□□ 0.24
PCDHGB1-201ENST00000523390 NCLP19338 710 aaKnown RBP16.54■□□□□ 0.24
PCDHGB1-201ENST00000523390 KCNJ4P48050 445 aa16.54■□□□□ 0.24
PCDHGB1-201ENST00000523390 PMFBP1Q8TBY8 1022 aa16.54■□□□□ 0.24
PCDHGB1-201ENST00000523390 ERBINQ96RT1 1412 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms