RNA–Protein interactions for RNA: ENST00000523310.1

CCNC-212, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-212ENST00000523310 EPAS1Q99814 870 aa13.92□□□□□ -0.18
CCNC-212ENST00000523310 GOLGA8CPA6NN73 597 aa13.91□□□□□ -0.18
CCNC-212ENST00000523310 PROX2Q3B8N5 592 aa13.91□□□□□ -0.18
CCNC-212ENST00000523310 WNT2BQ93097 391 aa13.91□□□□□ -0.18
CCNC-212ENST00000523310 RABGEF1Q9UJ41 708 aa13.91□□□□□ -0.18
CCNC-212ENST00000523310 C6orf132Q5T0Z8 1188 aa13.87□□□□□ -0.19
CCNC-212ENST00000523310 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.87□□□□□ -0.19
CCNC-212ENST00000523310 PDIA6Q15084 440 aa13.85□□□□□ -0.19
CCNC-212ENST00000523310 RTN4Q9NQC3 1192 aaKnown RBP13.85□□□□□ -0.19
CCNC-212ENST00000523310 ONECUT3O60422 494 aaPredicted RBP13.84□□□□□ -0.19
CCNC-212ENST00000523310 IFFO2Q5TF58 517 aa13.84□□□□□ -0.19
CCNC-212ENST00000523310 LAPTM4BQ86VI4 370 aa13.82□□□□□ -0.2
CCNC-212ENST00000523310 DDX12PQ92771 950 aa13.82□□□□□ -0.2
CCNC-212ENST00000523310 KIAA1468Q9P260 1216 aa13.8□□□□□ -0.2
CCNC-212ENST00000523310 SPDYE16A6NNV3 312 aaPredicted RBP13.79□□□□□ -0.2
CCNC-212ENST00000523310 ANKK1Q8NFD2 765 aa13.79□□□□□ -0.2
CCNC-212ENST00000523310 TRIM6-TRIM34B2RNG4 842 aa13.78□□□□□ -0.2
CCNC-212ENST00000523310 EN1Q05925 392 aaPredicted RBP13.78□□□□□ -0.2
CCNC-212ENST00000523310 RBM33Q96EV2 1170 aaKnown RBP13.78□□□□□ -0.2
CCNC-212ENST00000523310 ARIH1Q9Y4X5 557 aaPredicted RBP13.78□□□□□ -0.2
CCNC-212ENST00000523310 E2F4Q16254 413 aa13.77□□□□□ -0.21
CCNC-212ENST00000523310 NBR1Q14596 966 aa13.76□□□□□ -0.21
CCNC-212ENST00000523310 PAXIP1Q6ZW49 1069 aaPredicted RBP13.76□□□□□ -0.21
CCNC-212ENST00000523310 SOWAHBA6NEL2 793 aa13.74□□□□□ -0.21
CCNC-212ENST00000523310 ZFRQ96KR1 1074 aaKnown RBP13.74□□□□□ -0.21
CCNC-212ENST00000523310 CFAP44Q96MT7 982 aa13.74□□□□□ -0.21
CCNC-212ENST00000523310 BCAMP50895 628 aa13.72□□□□□ -0.21
CCNC-212ENST00000523310 TSR1Q2NL82 804 aaKnown RBP13.72□□□□□ -0.21
CCNC-212ENST00000523310 SEPT9Q9UHD8 586 aaPredicted RBP13.72□□□□□ -0.21
CCNC-212ENST00000523310 MAP3K7O43318 606 aa13.7□□□□□ -0.22
CCNC-212ENST00000523310 A0A0G2JS52 829 aa13.69□□□□□ -0.22
CCNC-212ENST00000523310 FAM98CQ17RN3 349 aaKnown RBP13.69□□□□□ -0.22
CCNC-212ENST00000523310 RGS20O76081 388 aa13.68□□□□□ -0.22
CCNC-212ENST00000523310 ITGBL1O95965 494 aaPredicted RBP13.67□□□□□ -0.22
CCNC-212ENST00000523310 NYAP1Q6ZVC0 841 aa13.67□□□□□ -0.22
CCNC-212ENST00000523310 WDR70Q9NW82 654 aa13.67□□□□□ -0.22
CCNC-212ENST00000523310 TSKSQ9UJT2 592 aa13.67□□□□□ -0.22
CCNC-212ENST00000523310 PRIM1P49642 420 aaKnown RBP13.66□□□□□ -0.22
CCNC-212ENST00000523310 WBP1LQ9NX94 342 aa13.63□□□□□ -0.23
CCNC-212ENST00000523310 PACS2Q86VP3 889 aa13.62□□□□□ -0.23
CCNC-212ENST00000523310 CERKQ8TCT0 537 aa13.61□□□□□ -0.23
CCNC-212ENST00000523310 CDCA7LQ96GN5 454 aa13.61□□□□□ -0.23
CCNC-212ENST00000523310 GRXCR2A6NFK2 248 aa13.6□□□□□ -0.23
CCNC-212ENST00000523310 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.6□□□□□ -0.23
CCNC-212ENST00000523310 PRSS12P56730 875 aa13.59□□□□□ -0.23
CCNC-212ENST00000523310 LRCH3Q96II8 777 aa13.59□□□□□ -0.23
CCNC-212ENST00000523310 OSBPP22059 807 aa13.58□□□□□ -0.24
CCNC-212ENST00000523310 FAM198AQ9UFP1 575 aa13.58□□□□□ -0.24
CCNC-212ENST00000523310 TSR3Q9UJK0 312 aaKnown RBP13.58□□□□□ -0.24
CCNC-212ENST00000523310 HPS5Q9UPZ3 1129 aa13.56□□□□□ -0.24
CCNC-212ENST00000523310 CDHR5Q9HBB8 845 aa13.54□□□□□ -0.24
CCNC-212ENST00000523310 C3orf80F5H4A9 247 aa13.53□□□□□ -0.24
CCNC-212ENST00000523310 RBM27Q9P2N5 1060 aaKnown RBP13.53□□□□□ -0.24
CCNC-212ENST00000523310 SMAPO00193 183 aa13.52□□□□□ -0.25
CCNC-212ENST00000523310 NBPF26B4DH59 902 aa13.5□□□□□ -0.25
CCNC-212ENST00000523310 KCNC4Q03721 635 aa13.5□□□□□ -0.25
CCNC-212ENST00000523310 TATDN2Q93075 761 aa13.5□□□□□ -0.25
CCNC-212ENST00000523310 SAMD7Q7Z3H4 446 aa13.49□□□□□ -0.25
CCNC-212ENST00000523310 TTC13Q8NBP0 860 aa13.47□□□□□ -0.25
CCNC-212ENST00000523310 PNMA3Q9UL41 463 aa13.47□□□□□ -0.25
CCNC-212ENST00000523310 PPP4CP60510 307 aa13.46□□□□□ -0.25
CCNC-212ENST00000523310 NPDC1Q9NQX5 325 aaPredicted RBP13.45□□□□□ -0.26
CCNC-212ENST00000523310 TSHZ2Q9NRE2 1034 aa13.45□□□□□ -0.26
CCNC-212ENST00000523310 NUDT18Q6ZVK8 323 aa13.44□□□□□ -0.26
CCNC-212ENST00000523310 IRX2Q9BZI1 471 aaPredicted RBP13.44□□□□□ -0.26
CCNC-212ENST00000523310 ARHGEF1Q92888 912 aaKnown RBP13.43□□□□□ -0.26
CCNC-212ENST00000523310 KCNV2Q8TDN2 545 aa13.4□□□□□ -0.26
CCNC-212ENST00000523310 TJAP1Q5JTD0 557 aa13.39□□□□□ -0.27
CCNC-212ENST00000523310 PADI6Q6TGC4 694 aa13.39□□□□□ -0.27
CCNC-212ENST00000523310 MLLT3P42568 568 aaPredicted RBP13.37□□□□□ -0.27
CCNC-212ENST00000523310 HDGFP51858 240 aaKnown RBP13.33□□□□□ -0.28
CCNC-212ENST00000523310 MTRQ99707 1265 aa13.33□□□□□ -0.28
CCNC-212ENST00000523310 IL21Q9HBE4 155 aa13.32□□□□□ -0.28
CCNC-212ENST00000523310 EYA1Q99502 592 aa13.31□□□□□ -0.28
CCNC-212ENST00000523310 APLP1P51693 650 aa13.3□□□□□ -0.28
CCNC-212ENST00000523310 SWT1Q5T5J6 900 aaKnown RBP13.3□□□□□ -0.28
CCNC-212ENST00000523310 RNF40O75150 1001 aa13.29□□□□□ -0.28
CCNC-212ENST00000523310 NECTIN2Q92692 538 aa13.29□□□□□ -0.28
CCNC-212ENST00000523310 PTGDRQ13258 359 aa13.28□□□□□ -0.28
CCNC-212ENST00000523310 SLF2Q8IX21 1173 aa13.28□□□□□ -0.28
CCNC-212ENST00000523310 P3H3Q8IVL6 736 aa13.24□□□□□ -0.29
CCNC-212ENST00000523310 ZNF516Q92618 1163 aa13.24□□□□□ -0.29
CCNC-212ENST00000523310 PPP1R18Q6NYC8 613 aa13.21□□□□□ -0.29
CCNC-212ENST00000523310 SLC4A3P48751 1232 aa13.19□□□□□ -0.3
CCNC-212ENST00000523310 ADGRG1Q9Y653 693 aa13.19□□□□□ -0.3
CCNC-212ENST00000523310 DNAJB2P25686 324 aa13.18□□□□□ -0.3
CCNC-212ENST00000523310 RBM46Q8TBY0 533 aaKnown RBP13.17□□□□□ -0.3
CCNC-212ENST00000523310 NKX2-3Q8TAU0 364 aa13.16□□□□□ -0.3
CCNC-212ENST00000523310 PRR14Q9BWN1 585 aa13.16□□□□□ -0.3
CCNC-212ENST00000523310 PRKD2Q9BZL6 878 aa13.16□□□□□ -0.3
CCNC-212ENST00000523310 TMEM134Q9H6X4 195 aa13.16□□□□□ -0.3
CCNC-212ENST00000523310 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.16□□□□□ -0.3
CCNC-212ENST00000523310 NUTM2FA1L443 756 aa13.15□□□□□ -0.3
CCNC-212ENST00000523310 SEMA3EO15041 775 aa13.15□□□□□ -0.3
CCNC-212ENST00000523310 COPS2P61201 443 aa13.15□□□□□ -0.3
CCNC-212ENST00000523310 LAPTM4AQ15012 233 aa13.15□□□□□ -0.3
CCNC-212ENST00000523310 Q6ZNB5 142 aa13.14□□□□□ -0.31
CCNC-212ENST00000523310 V9GY48 417 aaPredicted RBP13.14□□□□□ -0.31
CCNC-212ENST00000523310 ZPR1O75312 459 aa13.12□□□□□ -0.31
CCNC-212ENST00000523310 FCHSD2O94868 740 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms