RNA–Protein interactions for RNA: ENST00000523054.5

CDKL3-209, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 2 BASIC

Gene CDKL3, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-209ENST00000523054 PLCB2Q00722 1185 aa8.16□□□□□ -1.1
CDKL3-209ENST00000523054 FAM212AQ96EL1 285 aa8.16□□□□□ -1.1
CDKL3-209ENST00000523054 TTC37Q6PGP7 1564 aa8.15□□□□□ -1.1
CDKL3-209ENST00000523054 ABCA10Q8WWZ4 1543 aa8.15□□□□□ -1.1
CDKL3-209ENST00000523054 UHRF1BP1Q6BDS2 1440 aa8.15□□□□□ -1.1
CDKL3-209ENST00000523054 CD109Q6YHK3 1445 aa8.15□□□□□ -1.1
CDKL3-209ENST00000523054 PTPRGP23470 1445 aa8.14□□□□□ -1.11
CDKL3-209ENST00000523054 POGZQ7Z3K3 1410 aa8.14□□□□□ -1.11
CDKL3-209ENST00000523054 FER1L4A9Z1Z3 1794 aa8.14□□□□□ -1.11
CDKL3-209ENST00000523054 UHRF1BP1LA0JNW5 1464 aa8.12□□□□□ -1.11
CDKL3-209ENST00000523054 CCDC88BA6NC98 1476 aa8.12□□□□□ -1.11
CDKL3-209ENST00000523054 KIAA0556O60303 1618 aa8.11□□□□□ -1.11
CDKL3-209ENST00000523054 EMP3P54852 163 aa8.11□□□□□ -1.11
CDKL3-209ENST00000523054 RBM33Q96EV2 1170 aaKnown RBP8.11□□□□□ -1.11
CDKL3-209ENST00000523054 KRTAP3-3Q9BYR6 98 aa8.11□□□□□ -1.11
CDKL3-209ENST00000523054 KRTAP3-2Q9BYR7 98 aa8.11□□□□□ -1.11
CDKL3-209ENST00000523054 ZNF335Q9H4Z2 1342 aaPredicted RBP8.11□□□□□ -1.11
CDKL3-209ENST00000523054 CUX1P39880 1505 aa8.1□□□□□ -1.11
CDKL3-209ENST00000523054 SETD1BQ9UPS6 1966 aaKnown RBP8.09□□□□□ -1.11
CDKL3-209ENST00000523054 FANCAO15360 1455 aa8.09□□□□□ -1.11
CDKL3-209ENST00000523054 ZCCHC11Q5TAX3 1644 aaKnown RBP8.08□□□□□ -1.12
CDKL3-209ENST00000523054 TTBK1Q5TCY1 1321 aaPredicted RBP8.08□□□□□ -1.12
CDKL3-209ENST00000523054 WDR7Q9Y4E6 1490 aa8.08□□□□□ -1.12
CDKL3-209ENST00000523054 ARHGEF40Q8TER5 1519 aa8.08□□□□□ -1.12
CDKL3-209ENST00000523054 KDM5BQ9UGL1 1544 aa8.08□□□□□ -1.12
CDKL3-209ENST00000523054 HS3ST6Q96QI5 342 aa8.07□□□□□ -1.12
CDKL3-209ENST00000523054 NCOA1Q15788 1441 aa8.07□□□□□ -1.12
CDKL3-209ENST00000523054 POTEB3A0JP26 581 aa8.07□□□□□ -1.12
CDKL3-209ENST00000523054 POTEBQ6S5H4 581 aa8.07□□□□□ -1.12
CDKL3-209ENST00000523054 PDCD7Q8N8D1 485 aaKnown RBP8.07□□□□□ -1.12
CDKL3-209ENST00000523054 C3orf67Q6ZVT6 689 aa8.06□□□□□ -1.12
CDKL3-209ENST00000523054 PHLDB1Q86UU1 1377 aa8.06□□□□□ -1.12
CDKL3-209ENST00000523054 IFNLR1Q8IU57 520 aaPredicted RBP8.05□□□□□ -1.12
CDKL3-209ENST00000523054 TAOK2Q9UL54 1235 aa8.05□□□□□ -1.12
CDKL3-209ENST00000523054 UACAQ9BZF9 1416 aa8.05□□□□□ -1.12
CDKL3-209ENST00000523054 TNIKQ9UKE5 1360 aa8.05□□□□□ -1.12
CDKL3-209ENST00000523054 KLHL34Q8N239 644 aa8.05□□□□□ -1.12
CDKL3-209ENST00000523054 L3MBTL3Q96JM7 780 aaPredicted RBP8.04□□□□□ -1.12
CDKL3-209ENST00000523054 ERICH3Q5RHP9 1530 aa8.04□□□□□ -1.12
CDKL3-209ENST00000523054 PTPRKQ15262 1439 aa8.03□□□□□ -1.12
CDKL3-209ENST00000523054 FAM205CA6NFA0 338 aa8.03□□□□□ -1.12
CDKL3-209ENST00000523054 RAPGEF3O95398 923 aa8.03□□□□□ -1.12
CDKL3-209ENST00000523054 PYGBP11216 843 aa8.03□□□□□ -1.12
CDKL3-209ENST00000523054 PCDHB8Q9UN66 801 aa8.03□□□□□ -1.12
CDKL3-209ENST00000523054 HAP1P54257 671 aaPredicted RBP8.02□□□□□ -1.13
CDKL3-209ENST00000523054 BCANQ96GW7 911 aa8.02□□□□□ -1.13
CDKL3-209ENST00000523054 FRMPD1Q5SYB0 1578 aa8.01□□□□□ -1.13
CDKL3-209ENST00000523054 MLECQ14165 292 aa8.01□□□□□ -1.13
CDKL3-209ENST00000523054 SETBP1Q9Y6X0 1596 aa8.01□□□□□ -1.13
CDKL3-209ENST00000523054 CEBPAP49715 358 aaPredicted RBP8□□□□□ -1.13
CDKL3-209ENST00000523054 DCAF8Q5TAQ9 597 aa8□□□□□ -1.13
CDKL3-209ENST00000523054 AKNAQ7Z591 1439 aa8□□□□□ -1.13
CDKL3-209ENST00000523054 CARMIL2Q6F5E8 1435 aa8□□□□□ -1.13
CDKL3-209ENST00000523054 SENP3-EIF4A1A0A087X0R7 540 aa7.99□□□□□ -1.13
CDKL3-209ENST00000523054 SLC34A2O95436 690 aa7.99□□□□□ -1.13
CDKL3-209ENST00000523054 CPS1P31327 1500 aa7.99□□□□□ -1.13
CDKL3-209ENST00000523054 CAMSAP1Q5T5Y3 1602 aa7.98□□□□□ -1.13
CDKL3-209ENST00000523054 YY1P25490 414 aa7.98□□□□□ -1.13
CDKL3-209ENST00000523054 ARHGEF12Q9NZN5 1544 aa7.98□□□□□ -1.13
CDKL3-209ENST00000523054 MKRN3Q13064 507 aaKnown RBP7.97□□□□□ -1.13
CDKL3-209ENST00000523054 KCNH8Q96L42 1107 aa7.97□□□□□ -1.13
CDKL3-209ENST00000523054 ALKQ9UM73 1620 aa7.97□□□□□ -1.13
CDKL3-209ENST00000523054 SIGLEC1Q9BZZ2 1709 aa7.97□□□□□ -1.13
CDKL3-209ENST00000523054 TRIM52Q96A61 297 aa7.97□□□□□ -1.13
CDKL3-209ENST00000523054 GOLGA2Q08379 1002 aa7.96□□□□□ -1.14
CDKL3-209ENST00000523054 SPOCK2Q92563 424 aa7.96□□□□□ -1.14
CDKL3-209ENST00000523054 ZNF467Q7Z7K2 595 aaPredicted RBP7.95□□□□□ -1.14
CDKL3-209ENST00000523054 NEO1Q92859 1461 aa7.95□□□□□ -1.14
CDKL3-209ENST00000523054 LRP5O75197 1615 aa7.95□□□□□ -1.14
CDKL3-209ENST00000523054 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.94□□□□□ -1.14
CDKL3-209ENST00000523054 NCKAP5LQ9HCH0 1330 aa7.94□□□□□ -1.14
CDKL3-209ENST00000523054 HOXB3P14651 431 aaPredicted RBP7.92□□□□□ -1.14
CDKL3-209ENST00000523054 PKD2Q13563 968 aa7.92□□□□□ -1.14
CDKL3-209ENST00000523054 EFCAB5A4FU69 1503 aa7.92□□□□□ -1.14
CDKL3-209ENST00000523054 RNF166Q96A37 237 aaPredicted RBP7.92□□□□□ -1.14
CDKL3-209ENST00000523054 ZFYVE16Q7Z3T8 1539 aa7.92□□□□□ -1.14
CDKL3-209ENST00000523054 LRRC7Q96NW7 1537 aa7.92□□□□□ -1.14
CDKL3-209ENST00000523054 RAPGEF6Q8TEU7 1601 aa7.91□□□□□ -1.14
CDKL3-209ENST00000523054 HOXB1P14653 301 aaPredicted RBP7.91□□□□□ -1.14
CDKL3-209ENST00000523054 TPRNQ4KMQ1 711 aa7.91□□□□□ -1.14
CDKL3-209ENST00000523054 RICTORQ6R327 1708 aa7.9□□□□□ -1.14
CDKL3-209ENST00000523054 TRAPPC8Q9Y2L5 1435 aa7.9□□□□□ -1.14
CDKL3-209ENST00000523054 C3P01024 1663 aa7.9□□□□□ -1.15
CDKL3-209ENST00000523054 WRNQ14191 1432 aaPredicted RBP eCLIP7.89□□□□□ -1.15
CDKL3-209ENST00000523054 CDK12Q9NYV4 1490 aaPredicted RBP7.89□□□□□ -1.15
CDKL3-209ENST00000523054 VSIG10Q8N0Z9 540 aa7.89□□□□□ -1.15
CDKL3-209ENST00000523054 PLA2R1Q13018 1463 aa7.89□□□□□ -1.15
CDKL3-209ENST00000523054 PSEN1P49768 467 aa7.88□□□□□ -1.15
CDKL3-209ENST00000523054 DENND4BO75064 1496 aaPredicted RBP7.88□□□□□ -1.15
CDKL3-209ENST00000523054 SHANK2Q9UPX8 1470 aa7.88□□□□□ -1.15
CDKL3-209ENST00000523054 SUPT6HQ7KZ85 1726 aaKnown RBP7.87□□□□□ -1.15
CDKL3-209ENST00000523054 ZMYM4Q5VZL5 1548 aa7.87□□□□□ -1.15
CDKL3-209ENST00000523054 CHRM1P11229 460 aaPredicted RBP7.87□□□□□ -1.15
CDKL3-209ENST00000523054 GSE1Q14687 1217 aa7.87□□□□□ -1.15
CDKL3-209ENST00000523054 ZNF772Q68DY9 489 aaPredicted RBP7.87□□□□□ -1.15
CDKL3-209ENST00000523054 KDM2AQ9Y2K7 1162 aa7.87□□□□□ -1.15
CDKL3-209ENST00000523054 RNF17Q9BXT8 1623 aaKnown RBP7.87□□□□□ -1.15
CDKL3-209ENST00000523054 ABCA9Q8IUA7 1624 aa7.86□□□□□ -1.15
CDKL3-209ENST00000523054 TCOF1Q13428 1488 aaKnown RBP7.86□□□□□ -1.15
CDKL3-209ENST00000523054 FHOD3Q2V2M9 1422 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms