RNA–Protein interactions for RNA: ENST00000523013.1

CLK4-213, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-213ENST00000523013 EPAS1Q99814 870 aa11.17□□□□□ -0.62
CLK4-213ENST00000523013 PPP1R3GB7ZBB8 358 aa11.14□□□□□ -0.63
CLK4-213ENST00000523013 COL9A1P20849 921 aa11.14□□□□□ -0.63
CLK4-213ENST00000523013 BHMG1C9JSJ3 638 aaPredicted RBP11.13□□□□□ -0.63
CLK4-213ENST00000523013 PLCB2Q00722 1185 aa11.13□□□□□ -0.63
CLK4-213ENST00000523013 C6orf132Q5T0Z8 1188 aa11.12□□□□□ -0.63
CLK4-213ENST00000523013 RBM33Q96EV2 1170 aaKnown RBP11.11□□□□□ -0.63
CLK4-213ENST00000523013 NBR1Q14596 966 aa11.1□□□□□ -0.63
CLK4-213ENST00000523013 PROX2Q3B8N5 592 aa11.09□□□□□ -0.63
CLK4-213ENST00000523013 PRIM1P49642 420 aaKnown RBP11.08□□□□□ -0.64
CLK4-213ENST00000523013 EN1Q05925 392 aaPredicted RBP11.08□□□□□ -0.64
CLK4-213ENST00000523013 KCNV2Q8TDN2 545 aa11.08□□□□□ -0.64
CLK4-213ENST00000523013 STAC3Q96MF2 364 aa11.08□□□□□ -0.64
CLK4-213ENST00000523013 TSR1Q2NL82 804 aaKnown RBP11.06□□□□□ -0.64
CLK4-213ENST00000523013 GRXCR2A6NFK2 248 aa11.05□□□□□ -0.64
CLK4-213ENST00000523013 ARHGEF1Q92888 912 aaKnown RBP11.05□□□□□ -0.64
CLK4-213ENST00000523013 KCTD12Q96CX2 325 aaKnown RBP11.05□□□□□ -0.64
CLK4-213ENST00000523013 MAP3K7O43318 606 aa11.04□□□□□ -0.64
CLK4-213ENST00000523013 RABGEF1Q9UJ41 708 aa11.04□□□□□ -0.64
CLK4-213ENST00000523013 HCSTQ9UBK5 93 aa11.03□□□□□ -0.64
CLK4-213ENST00000523013 OSBPP22059 807 aa11.02□□□□□ -0.65
CLK4-213ENST00000523013 MRPL50Q8N5N7 158 aaKnown RBP11.02□□□□□ -0.65
CLK4-213ENST00000523013 NBPF3Q9H094 633 aa11.02□□□□□ -0.65
CLK4-213ENST00000523013 ONECUT3O60422 494 aaPredicted RBP11.01□□□□□ -0.65
CLK4-213ENST00000523013 KIAA1468Q9P260 1216 aa11□□□□□ -0.65
CLK4-213ENST00000523013 TRIM6-TRIM34B2RNG4 842 aa10.99□□□□□ -0.65
CLK4-213ENST00000523013 THSD4Q6ZMP0 1018 aa10.97□□□□□ -0.65
CLK4-213ENST00000523013 WNT2BQ93097 391 aa10.97□□□□□ -0.65
CLK4-213ENST00000523013 GOLGA8CPA6NN73 597 aa10.96□□□□□ -0.65
CLK4-213ENST00000523013 MLLT3P42568 568 aaPredicted RBP10.96□□□□□ -0.65
CLK4-213ENST00000523013 CDHR5Q9HBB8 845 aa10.96□□□□□ -0.65
CLK4-213ENST00000523013 TSKSQ9UJT2 592 aa10.96□□□□□ -0.65
CLK4-213ENST00000523013 LAPTM4BQ86VI4 370 aa10.94□□□□□ -0.66
CLK4-213ENST00000523013 P3H3Q8IVL6 736 aa10.94□□□□□ -0.66
CLK4-213ENST00000523013 HAP1P54257 671 aaPredicted RBP10.93□□□□□ -0.66
CLK4-213ENST00000523013 PTPN5P54829 565 aa10.93□□□□□ -0.66
CLK4-213ENST00000523013 FAM198AQ9UFP1 575 aa10.93□□□□□ -0.66
CLK4-213ENST00000523013 SEPT9Q9UHD8 586 aaPredicted RBP10.93□□□□□ -0.66
CLK4-213ENST00000523013 PRSS12P56730 875 aa10.92□□□□□ -0.66
CLK4-213ENST00000523013 CERKQ8TCT0 537 aa10.92□□□□□ -0.66
CLK4-213ENST00000523013 CDCA7LQ96GN5 454 aa10.92□□□□□ -0.66
CLK4-213ENST00000523013 ZFRQ96KR1 1074 aaKnown RBP10.9□□□□□ -0.66
CLK4-213ENST00000523013 NPDC1Q9NQX5 325 aaPredicted RBP10.9□□□□□ -0.66
CLK4-213ENST00000523013 PACS2Q86VP3 889 aa10.89□□□□□ -0.67
CLK4-213ENST00000523013 ANKK1Q8NFD2 765 aa10.89□□□□□ -0.67
CLK4-213ENST00000523013 KDM2AQ9Y2K7 1162 aa10.89□□□□□ -0.67
CLK4-213ENST00000523013 C3orf80F5H4A9 247 aa10.88□□□□□ -0.67
CLK4-213ENST00000523013 FAM98CQ17RN3 349 aaKnown RBP10.88□□□□□ -0.67
CLK4-213ENST00000523013 PLA2G2EQ9NZK7 142 aa10.88□□□□□ -0.67
CLK4-213ENST00000523013 BCAMP50895 628 aa10.87□□□□□ -0.67
CLK4-213ENST00000523013 SOWAHBA6NEL2 793 aa10.86□□□□□ -0.67
CLK4-213ENST00000523013 SEMA3EO15041 775 aa10.86□□□□□ -0.67
CLK4-213ENST00000523013 RBM27Q9P2N5 1060 aaKnown RBP10.86□□□□□ -0.67
CLK4-213ENST00000523013 SMAPO00193 183 aa10.85□□□□□ -0.67
CLK4-213ENST00000523013 TTC13Q8NBP0 860 aa10.85□□□□□ -0.67
CLK4-213ENST00000523013 TATDN2Q93075 761 aa10.83□□□□□ -0.68
CLK4-213ENST00000523013 PADI6Q6TGC4 694 aa10.82□□□□□ -0.68
CLK4-213ENST00000523013 NBPF26B4DH59 902 aa10.81□□□□□ -0.68
CLK4-213ENST00000523013 PNMA3Q9UL41 463 aa10.81□□□□□ -0.68
CLK4-213ENST00000523013 PTGDRQ13258 359 aa10.79□□□□□ -0.68
CLK4-213ENST00000523013 NUDT18Q6ZVK8 323 aa10.79□□□□□ -0.68
CLK4-213ENST00000523013 WBP1LQ9NX94 342 aa10.79□□□□□ -0.68
CLK4-213ENST00000523013 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.79□□□□□ -0.68
CLK4-213ENST00000523013 TESPA1A2RU30 521 aaPredicted RBP10.78□□□□□ -0.68
CLK4-213ENST00000523013 LRCH3Q96II8 777 aa10.78□□□□□ -0.68
CLK4-213ENST00000523013 SAMD7Q7Z3H4 446 aa10.76□□□□□ -0.69
CLK4-213ENST00000523013 VSIG10Q8N0Z9 540 aa10.76□□□□□ -0.69
CLK4-213ENST00000523013 HPS5Q9UPZ3 1129 aa10.76□□□□□ -0.69
CLK4-213ENST00000523013 NUTM2FA1L443 756 aa10.75□□□□□ -0.69
CLK4-213ENST00000523013 TSR3Q9UJK0 312 aaKnown RBP10.75□□□□□ -0.69
CLK4-213ENST00000523013 IFFO2Q5TF58 517 aa10.74□□□□□ -0.69
CLK4-213ENST00000523013 NYAP1Q6ZVC0 841 aa10.74□□□□□ -0.69
CLK4-213ENST00000523013 EYA1Q99502 592 aa10.73□□□□□ -0.69
CLK4-213ENST00000523013 RBM26Q5T8P6 1007 aaKnown RBP10.71□□□□□ -0.69
CLK4-213ENST00000523013 FCHSD2O94868 740 aa10.7□□□□□ -0.7
CLK4-213ENST00000523013 ITGBL1O95965 494 aaPredicted RBP10.7□□□□□ -0.7
CLK4-213ENST00000523013 PPP4CP60510 307 aa10.68□□□□□ -0.7
CLK4-213ENST00000523013 SMYD5Q6GMV2 418 aa10.68□□□□□ -0.7
CLK4-213ENST00000523013 ADGRG1Q9Y653 693 aa10.68□□□□□ -0.7
CLK4-213ENST00000523013 SWT1Q5T5J6 900 aaKnown RBP10.67□□□□□ -0.7
CLK4-213ENST00000523013 GPR37O15354 613 aa10.66□□□□□ -0.7
CLK4-213ENST00000523013 FAM161AQ3B820 660 aa10.65□□□□□ -0.7
CLK4-213ENST00000523013 HDGFP51858 240 aaKnown RBP10.64□□□□□ -0.71
CLK4-213ENST00000523013 A0A0G2JS52 829 aa10.63□□□□□ -0.71
CLK4-213ENST00000523013 RNF40O75150 1001 aa10.63□□□□□ -0.71
CLK4-213ENST00000523013 HIC1Q14526 733 aa10.63□□□□□ -0.71
CLK4-213ENST00000523013 RBM46Q8TBY0 533 aaKnown RBP10.62□□□□□ -0.71
CLK4-213ENST00000523013 DNAJB2P25686 324 aa10.61□□□□□ -0.71
CLK4-213ENST00000523013 SLF2Q8IX21 1173 aa10.61□□□□□ -0.71
CLK4-213ENST00000523013 FECHP22830 423 aa10.6□□□□□ -0.71
CLK4-213ENST00000523013 APLP1P51693 650 aa10.6□□□□□ -0.71
CLK4-213ENST00000523013 KCNC4Q03721 635 aa10.6□□□□□ -0.71
CLK4-213ENST00000523013 TMEM134Q9H6X4 195 aa10.6□□□□□ -0.71
CLK4-213ENST00000523013 RCCD1A6NED2 376 aa10.59□□□□□ -0.71
CLK4-213ENST00000523013 GNPATO15228 680 aa10.59□□□□□ -0.71
CLK4-213ENST00000523013 TJAP1Q5JTD0 557 aa10.59□□□□□ -0.71
CLK4-213ENST00000523013 PXYLP1Q8TE99 480 aa10.57□□□□□ -0.72
CLK4-213ENST00000523013 MTRQ99707 1265 aa10.57□□□□□ -0.72
CLK4-213ENST00000523013 OATP04181 439 aa10.55□□□□□ -0.72
CLK4-213ENST00000523013 METTL3Q86U44 580 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms