RNA–Protein interactions for RNA: ENST00000522878.5

ARFGEF1-208, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARFGEF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-208ENST00000522878 ZRANB1Q9UGI0 708 aa9.81□□□□□ -0.84
ARFGEF1-208ENST00000522878 XIRP1Q702N8 1843 aaKnown RBP9.81□□□□□ -0.84
ARFGEF1-208ENST00000522878 NEURL4Q96JN8 1562 aa9.8□□□□□ -0.84
ARFGEF1-208ENST00000522878 MAGI2Q86UL8 1455 aa9.79□□□□□ -0.84
ARFGEF1-208ENST00000522878 MYO3AQ8NEV4 1616 aa9.78□□□□□ -0.84
ARFGEF1-208ENST00000522878 ABCA8O94911 1581 aa9.78□□□□□ -0.84
ARFGEF1-208ENST00000522878 PKD2Q13563 968 aa9.77□□□□□ -0.85
ARFGEF1-208ENST00000522878 UTRNP46939 3433 aa9.77□□□□□ -0.85
ARFGEF1-208ENST00000522878 SENP3-EIF4A1A0A087X0R7 540 aa9.76□□□□□ -0.85
ARFGEF1-208ENST00000522878 YY1P25490 414 aa9.76□□□□□ -0.85
ARFGEF1-208ENST00000522878 CEP170BQ9Y4F5 1589 aaPredicted RBP9.75□□□□□ -0.85
ARFGEF1-208ENST00000522878 C9orf84Q5VXU9 1444 aa9.74□□□□□ -0.85
ARFGEF1-208ENST00000522878 SYNMO15061 1565 aa9.74□□□□□ -0.85
ARFGEF1-208ENST00000522878 NHSL1Q5SYE7 1610 aa9.74□□□□□ -0.85
ARFGEF1-208ENST00000522878 MROH2AA6NES4 1674 aa9.74□□□□□ -0.85
ARFGEF1-208ENST00000522878 ATP10AO60312 1499 aa9.73□□□□□ -0.85
ARFGEF1-208ENST00000522878 CFAP74Q9C0B2 1584 aa9.73□□□□□ -0.85
ARFGEF1-208ENST00000522878 PRR29P0C7W0 189 aa9.73□□□□□ -0.85
ARFGEF1-208ENST00000522878 PLCB2Q00722 1185 aa9.72□□□□□ -0.85
ARFGEF1-208ENST00000522878 UGGT2Q9NYU1 1516 aa9.72□□□□□ -0.85
ARFGEF1-208ENST00000522878 NPATQ14207 1427 aa9.71□□□□□ -0.86
ARFGEF1-208ENST00000522878 LRP6O75581 1613 aa9.71□□□□□ -0.86
ARFGEF1-208ENST00000522878 POTEIP0CG38 1075 aa9.7□□□□□ -0.86
ARFGEF1-208ENST00000522878 PCDH10Q9P2E7 1040 aa9.7□□□□□ -0.86
ARFGEF1-208ENST00000522878 ROBO1Q9Y6N7 1651 aa9.7□□□□□ -0.86
ARFGEF1-208ENST00000522878 RGS12O14924 1447 aa9.69□□□□□ -0.86
ARFGEF1-208ENST00000522878 CD44P16070 742 aaKnown RBP9.69□□□□□ -0.86
ARFGEF1-208ENST00000522878 REREQ9P2R6 1566 aa9.67□□□□□ -0.86
ARFGEF1-208ENST00000522878 AGLP35573 1532 aa9.66□□□□□ -0.86
ARFGEF1-208ENST00000522878 CDK13Q14004 1512 aaKnown RBP9.66□□□□□ -0.86
ARFGEF1-208ENST00000522878 FAM135BQ49AJ0 1406 aa9.66□□□□□ -0.86
ARFGEF1-208ENST00000522878 DNMT1P26358 1616 aaKnown RBP9.66□□□□□ -0.86
ARFGEF1-208ENST00000522878 PHLPP1O60346 1717 aa9.65□□□□□ -0.86
ARFGEF1-208ENST00000522878 RXRBP28702 533 aa9.64□□□□□ -0.87
ARFGEF1-208ENST00000522878 ZNF772Q68DY9 489 aaPredicted RBP9.64□□□□□ -0.87
ARFGEF1-208ENST00000522878 BCANQ96GW7 911 aa9.64□□□□□ -0.87
ARFGEF1-208ENST00000522878 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.64□□□□□ -0.87
ARFGEF1-208ENST00000522878 KDM5CP41229 1560 aa9.63□□□□□ -0.87
ARFGEF1-208ENST00000522878 PLSCR2Q9NRY7 297 aa9.63□□□□□ -0.87
ARFGEF1-208ENST00000522878 DIP2CQ9Y2E4 1556 aa9.63□□□□□ -0.87
ARFGEF1-208ENST00000522878 HAP1P54257 671 aaPredicted RBP9.62□□□□□ -0.87
ARFGEF1-208ENST00000522878 FARP1Q9Y4F1 1045 aaPredicted RBP9.62□□□□□ -0.87
ARFGEF1-208ENST00000522878 ATP10BO94823 1461 aa9.61□□□□□ -0.87
ARFGEF1-208ENST00000522878 IGF1RP08069 1367 aa9.61□□□□□ -0.87
ARFGEF1-208ENST00000522878 COL16A1Q07092 1604 aaPredicted RBP9.6□□□□□ -0.87
ARFGEF1-208ENST00000522878 CHD4Q14839 1912 aa9.6□□□□□ -0.87
ARFGEF1-208ENST00000522878 BCL9LQ86UU0 1499 aa9.59□□□□□ -0.87
ARFGEF1-208ENST00000522878 CNTLNQ9NXG0 1405 aa9.59□□□□□ -0.87
ARFGEF1-208ENST00000522878 IQGAP1P46940 1657 aa9.59□□□□□ -0.87
ARFGEF1-208ENST00000522878 C1QTNF8P60827 252 aa9.59□□□□□ -0.87
ARFGEF1-208ENST00000522878 ABCA6Q8N139 1617 aa9.59□□□□□ -0.87
ARFGEF1-208ENST00000522878 SHPRHQ149N8 1683 aa9.58□□□□□ -0.88
ARFGEF1-208ENST00000522878 DEPDC5O75140 1603 aa9.58□□□□□ -0.88
ARFGEF1-208ENST00000522878 ATAD2Q6PL18 1390 aa9.58□□□□□ -0.88
ARFGEF1-208ENST00000522878 PRKCSHP14314 528 aaPredicted RBP9.57□□□□□ -0.88
ARFGEF1-208ENST00000522878 JCADQ9P266 1359 aa9.57□□□□□ -0.88
ARFGEF1-208ENST00000522878 DCBLD2Q96PD2 775 aa9.56□□□□□ -0.88
ARFGEF1-208ENST00000522878 CLTCQ00610 1675 aaKnown RBP9.55□□□□□ -0.88
ARFGEF1-208ENST00000522878 ZC3H13Q5T200 1668 aaKnown RBP9.55□□□□□ -0.88
ARFGEF1-208ENST00000522878 MED14O60244 1454 aa9.55□□□□□ -0.88
ARFGEF1-208ENST00000522878 A2ML1A8K2U0 1454 aa9.54□□□□□ -0.88
ARFGEF1-208ENST00000522878 CLCN6P51797 869 aa9.54□□□□□ -0.88
ARFGEF1-208ENST00000522878 TAOK2Q9UL54 1235 aa9.54□□□□□ -0.88
ARFGEF1-208ENST00000522878 NWD1Q149M9 1564 aa9.54□□□□□ -0.88
ARFGEF1-208ENST00000522878 ITSN2Q9NZM3 1697 aa9.53□□□□□ -0.88
ARFGEF1-208ENST00000522878 NUTM2BA6NNL0 878 aaPredicted RBP9.53□□□□□ -0.88
ARFGEF1-208ENST00000522878 NUTM2EB1AL46 878 aaPredicted RBP9.53□□□□□ -0.88
ARFGEF1-208ENST00000522878 NUTM2DQ5VT03 806 aaPredicted RBP9.53□□□□□ -0.88
ARFGEF1-208ENST00000522878 NUTM2AQ8IVF1 878 aaPredicted RBP9.53□□□□□ -0.88
ARFGEF1-208ENST00000522878 ZNF784Q8NCA9 323 aaPredicted RBP9.53□□□□□ -0.88
ARFGEF1-208ENST00000522878 ADGBQ8N7X0 1667 aa9.51□□□□□ -0.89
ARFGEF1-208ENST00000522878 SCAPERQ9BY12 1400 aa9.51□□□□□ -0.89
ARFGEF1-208ENST00000522878 ZNF579Q8NAF0 562 aaKnown RBP9.51□□□□□ -0.89
ARFGEF1-208ENST00000522878 CAMTA1Q9Y6Y1 1673 aa9.51□□□□□ -0.89
ARFGEF1-208ENST00000522878 ZMYM3Q14202 1370 aa9.5□□□□□ -0.89
ARFGEF1-208ENST00000522878 HRCP23327 699 aa9.5□□□□□ -0.89
ARFGEF1-208ENST00000522878 NPHP4O75161 1426 aaPredicted RBP9.49□□□□□ -0.89
ARFGEF1-208ENST00000522878 FBXO3Q9UK99 471 aa9.49□□□□□ -0.89
ARFGEF1-208ENST00000522878 SPATA31A6Q5VVP1 1343 aa9.49□□□□□ -0.89
ARFGEF1-208ENST00000522878 ARID3CA6NKF2 412 aa9.48□□□□□ -0.89
ARFGEF1-208ENST00000522878 CTTNBP2Q8WZ74 1663 aa9.48□□□□□ -0.89
ARFGEF1-208ENST00000522878 CARMIL1Q5VZK9 1371 aa9.48□□□□□ -0.89
ARFGEF1-208ENST00000522878 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.48□□□□□ -0.89
ARFGEF1-208ENST00000522878 PCNTO95613 3336 aa9.48□□□□□ -0.89
ARFGEF1-208ENST00000522878 FGD6Q6ZV73 1430 aa9.48□□□□□ -0.89
ARFGEF1-208ENST00000522878 VSIG10Q8N0Z9 540 aa9.47□□□□□ -0.89
ARFGEF1-208ENST00000522878 RBM6P78332 1123 aaKnown RBP9.46□□□□□ -0.9
ARFGEF1-208ENST00000522878 MEX3CQ5U5Q3 659 aaKnown RBP9.46□□□□□ -0.9
ARFGEF1-208ENST00000522878 ESF1Q9H501 851 aaKnown RBP9.46□□□□□ -0.9
ARFGEF1-208ENST00000522878 ABCC1P33527 1531 aa9.46□□□□□ -0.9
ARFGEF1-208ENST00000522878 CCDC125Q86Z20 511 aa9.45□□□□□ -0.9
ARFGEF1-208ENST00000522878 AFF2P51816 1311 aa9.45□□□□□ -0.9
ARFGEF1-208ENST00000522878 LRRC9Q6ZRR7 1453 aa9.45□□□□□ -0.9
ARFGEF1-208ENST00000522878 MAP3K1Q13233 1512 aa9.45□□□□□ -0.9
ARFGEF1-208ENST00000522878 GALR2O43603 387 aaPredicted RBP9.44□□□□□ -0.9
ARFGEF1-208ENST00000522878 ZNF518AQ6AHZ1 1483 aa9.44□□□□□ -0.9
ARFGEF1-208ENST00000522878 KIDINS220Q9ULH0 1771 aa9.43□□□□□ -0.9
ARFGEF1-208ENST00000522878 KIF14Q15058 1648 aa9.43□□□□□ -0.9
ARFGEF1-208ENST00000522878 DIP2AQ14689 1571 aa9.43□□□□□ -0.9
ARFGEF1-208ENST00000522878 KDM5DQ9BY66 1539 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms