RNA–Protein interactions for RNA: ENST00000522855.5

SKP1-210, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SKP1, Length 802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-210ENST00000522855 PDIA6Q15084 440 aa9.81□□□□□ -0.84
SKP1-210ENST00000522855 P3H3Q8IVL6 736 aa9.81□□□□□ -0.84
SKP1-210ENST00000522855 TYW1BQ6NUM6 668 aa9.8□□□□□ -0.84
SKP1-210ENST00000522855 ARIH1Q9Y4X5 557 aaPredicted RBP9.8□□□□□ -0.84
SKP1-210ENST00000522855 PPP1R3GB7ZBB8 358 aa9.79□□□□□ -0.84
SKP1-210ENST00000522855 FBXW7Q969H0 707 aa9.79□□□□□ -0.84
SKP1-210ENST00000522855 WDR70Q9NW82 654 aa9.79□□□□□ -0.84
SKP1-210ENST00000522855 COL9A1P20849 921 aa9.78□□□□□ -0.84
SKP1-210ENST00000522855 EPAS1Q99814 870 aa9.76□□□□□ -0.85
SKP1-210ENST00000522855 E2F4Q16254 413 aa9.75□□□□□ -0.85
SKP1-210ENST00000522855 HCSTQ9UBK5 93 aa9.75□□□□□ -0.85
SKP1-210ENST00000522855 SPDYE16A6NNV3 312 aaPredicted RBP9.73□□□□□ -0.85
SKP1-210ENST00000522855 PROX2Q3B8N5 592 aa9.73□□□□□ -0.85
SKP1-210ENST00000522855 KCTD12Q96CX2 325 aaKnown RBP9.73□□□□□ -0.85
SKP1-210ENST00000522855 C6orf132Q5T0Z8 1188 aa9.72□□□□□ -0.85
SKP1-210ENST00000522855 DDX12PQ92771 950 aa9.72□□□□□ -0.85
SKP1-210ENST00000522855 EN1Q05925 392 aaPredicted RBP9.71□□□□□ -0.86
SKP1-210ENST00000522855 PRIM1P49642 420 aaKnown RBP9.7□□□□□ -0.86
SKP1-210ENST00000522855 RABGEF1Q9UJ41 708 aa9.7□□□□□ -0.86
SKP1-210ENST00000522855 THSD4Q6ZMP0 1018 aa9.68□□□□□ -0.86
SKP1-210ENST00000522855 NBPF3Q9H094 633 aa9.68□□□□□ -0.86
SKP1-210ENST00000522855 ONECUT3O60422 494 aaPredicted RBP9.67□□□□□ -0.86
SKP1-210ENST00000522855 MRPL50Q8N5N7 158 aaKnown RBP9.67□□□□□ -0.86
SKP1-210ENST00000522855 STAC3Q96MF2 364 aa9.67□□□□□ -0.86
SKP1-210ENST00000522855 TSR1Q2NL82 804 aaKnown RBP9.66□□□□□ -0.86
SKP1-210ENST00000522855 RBM33Q96EV2 1170 aaKnown RBP9.66□□□□□ -0.86
SKP1-210ENST00000522855 TPRNQ4KMQ1 711 aa9.65□□□□□ -0.86
SKP1-210ENST00000522855 KCNV2Q8TDN2 545 aa9.65□□□□□ -0.86
SKP1-210ENST00000522855 TRIM6-TRIM34B2RNG4 842 aa9.64□□□□□ -0.87
SKP1-210ENST00000522855 WNT2BQ93097 391 aa9.64□□□□□ -0.87
SKP1-210ENST00000522855 PLA2G2EQ9NZK7 142 aa9.64□□□□□ -0.87
SKP1-210ENST00000522855 OSBPP22059 807 aa9.62□□□□□ -0.87
SKP1-210ENST00000522855 LAPTM4BQ86VI4 370 aa9.62□□□□□ -0.87
SKP1-210ENST00000522855 KIAA1468Q9P260 1216 aa9.62□□□□□ -0.87
SKP1-210ENST00000522855 MAP3K7O43318 606 aa9.61□□□□□ -0.87
SKP1-210ENST00000522855 TSKSQ9UJT2 592 aa9.61□□□□□ -0.87
SKP1-210ENST00000522855 PRKCSHP14314 528 aaPredicted RBP9.6□□□□□ -0.87
SKP1-210ENST00000522855 PTPN5P54829 565 aa9.59□□□□□ -0.87
SKP1-210ENST00000522855 ARHGEF1Q92888 912 aaKnown RBP9.59□□□□□ -0.87
SKP1-210ENST00000522855 GRXCR2A6NFK2 248 aa9.58□□□□□ -0.88
SKP1-210ENST00000522855 GOLGA8CPA6NN73 597 aa9.58□□□□□ -0.88
SKP1-210ENST00000522855 CDHR5Q9HBB8 845 aa9.58□□□□□ -0.88
SKP1-210ENST00000522855 FAM198AQ9UFP1 575 aa9.58□□□□□ -0.88
SKP1-210ENST00000522855 SEPT9Q9UHD8 586 aaPredicted RBP9.58□□□□□ -0.88
SKP1-210ENST00000522855 TULP1O00294 542 aaPredicted RBP9.57□□□□□ -0.88
SKP1-210ENST00000522855 ZFRQ96KR1 1074 aaKnown RBP9.57□□□□□ -0.88
SKP1-210ENST00000522855 SOWAHBA6NEL2 793 aa9.56□□□□□ -0.88
SKP1-210ENST00000522855 IFFO2Q5TF58 517 aa9.56□□□□□ -0.88
SKP1-210ENST00000522855 ANKK1Q8NFD2 765 aa9.56□□□□□ -0.88
SKP1-210ENST00000522855 C3orf80F5H4A9 247 aa9.55□□□□□ -0.88
SKP1-210ENST00000522855 BCAMP50895 628 aa9.55□□□□□ -0.88
SKP1-210ENST00000522855 FAM98CQ17RN3 349 aaKnown RBP9.55□□□□□ -0.88
SKP1-210ENST00000522855 PRSS12P56730 875 aa9.54□□□□□ -0.88
SKP1-210ENST00000522855 CERKQ8TCT0 537 aa9.54□□□□□ -0.88
SKP1-210ENST00000522855 CDCA7LQ96GN5 454 aa9.54□□□□□ -0.88
SKP1-210ENST00000522855 RBM27Q9P2N5 1060 aaKnown RBP9.53□□□□□ -0.88
SKP1-210ENST00000522855 TTC13Q8NBP0 860 aa9.52□□□□□ -0.89
SKP1-210ENST00000522855 NPDC1Q9NQX5 325 aaPredicted RBP9.52□□□□□ -0.89
SKP1-210ENST00000522855 MLLT3P42568 568 aaPredicted RBP9.51□□□□□ -0.89
SKP1-210ENST00000522855 PACS2Q86VP3 889 aa9.5□□□□□ -0.89
SKP1-210ENST00000522855 ITGBL1O95965 494 aaPredicted RBP9.49□□□□□ -0.89
SKP1-210ENST00000522855 WBP1LQ9NX94 342 aa9.48□□□□□ -0.89
SKP1-210ENST00000522855 SMAPO00193 183 aa9.47□□□□□ -0.89
SKP1-210ENST00000522855 NYAP1Q6ZVC0 841 aa9.47□□□□□ -0.89
SKP1-210ENST00000522855 NBPF26B4DH59 902 aa9.46□□□□□ -0.9
SKP1-210ENST00000522855 TATDN2Q93075 761 aa9.46□□□□□ -0.9
SKP1-210ENST00000522855 A0A0G2JS52 829 aa9.45□□□□□ -0.9
SKP1-210ENST00000522855 LMOD2Q6P5Q4 547 aa9.45□□□□□ -0.9
SKP1-210ENST00000522855 PADI6Q6TGC4 694 aa9.45□□□□□ -0.9
SKP1-210ENST00000522855 LRCH3Q96II8 777 aa9.45□□□□□ -0.9
SKP1-210ENST00000522855 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.45□□□□□ -0.9
SKP1-210ENST00000522855 SMYD5Q6GMV2 418 aa9.44□□□□□ -0.9
SKP1-210ENST00000522855 TSR3Q9UJK0 312 aaKnown RBP9.44□□□□□ -0.9
SKP1-210ENST00000522855 HPS5Q9UPZ3 1129 aa9.44□□□□□ -0.9
SKP1-210ENST00000522855 TESPA1A2RU30 521 aaPredicted RBP9.43□□□□□ -0.9
SKP1-210ENST00000522855 PNMA3Q9UL41 463 aa9.43□□□□□ -0.9
SKP1-210ENST00000522855 SEMA3EO15041 775 aa9.42□□□□□ -0.9
SKP1-210ENST00000522855 NUDT18Q6ZVK8 323 aa9.42□□□□□ -0.9
SKP1-210ENST00000522855 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.42□□□□□ -0.9
SKP1-210ENST00000522855 SAMD7Q7Z3H4 446 aa9.42□□□□□ -0.9
SKP1-210ENST00000522855 PTGDRQ13258 359 aa9.41□□□□□ -0.9
SKP1-210ENST00000522855 EYA1Q99502 592 aa9.38□□□□□ -0.91
SKP1-210ENST00000522855 RGS20O76081 388 aa9.37□□□□□ -0.91
SKP1-210ENST00000522855 PPP4CP60510 307 aa9.33□□□□□ -0.92
SKP1-210ENST00000522855 TJAP1Q5JTD0 557 aa9.33□□□□□ -0.92
SKP1-210ENST00000522855 SWT1Q5T5J6 900 aaKnown RBP9.33□□□□□ -0.92
SKP1-210ENST00000522855 ADGRG1Q9Y653 693 aa9.33□□□□□ -0.92
SKP1-210ENST00000522855 KCNC4Q03721 635 aa9.32□□□□□ -0.92
SKP1-210ENST00000522855 GPR37O15354 613 aa9.31□□□□□ -0.92
SKP1-210ENST00000522855 APLP1P51693 650 aa9.31□□□□□ -0.92
SKP1-210ENST00000522855 ZC3H15Q8WU90 426 aaKnown RBP9.29□□□□□ -0.92
SKP1-210ENST00000522855 NUTM2FA1L443 756 aa9.28□□□□□ -0.92
SKP1-210ENST00000522855 FCHSD2O94868 740 aa9.28□□□□□ -0.92
SKP1-210ENST00000522855 MTRQ99707 1265 aa9.28□□□□□ -0.92
SKP1-210ENST00000522855 SLF2Q8IX21 1173 aa9.27□□□□□ -0.93
SKP1-210ENST00000522855 TMEM134Q9H6X4 195 aa9.27□□□□□ -0.93
SKP1-210ENST00000522855 RNF40O75150 1001 aa9.26□□□□□ -0.93
SKP1-210ENST00000522855 DNAJB2P25686 324 aa9.26□□□□□ -0.93
SKP1-210ENST00000522855 RBM26Q5T8P6 1007 aaKnown RBP9.26□□□□□ -0.93
SKP1-210ENST00000522855 FAM161AQ3B820 660 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms