RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 NBR1Q14596 966 aa11.07□□□□□ -0.64
HMGB1P1-201ENST00000522557 FBXW7Q969H0 707 aa11.07□□□□□ -0.64
HMGB1P1-201ENST00000522557 PRIM1P49642 420 aaKnown RBP11.06□□□□□ -0.64
HMGB1P1-201ENST00000522557 MLLT3P42568 568 aaPredicted RBP11.05□□□□□ -0.64
HMGB1P1-201ENST00000522557 C6orf132Q5T0Z8 1188 aa11.04□□□□□ -0.64
HMGB1P1-201ENST00000522557 KCNH8Q96L42 1107 aa11.04□□□□□ -0.64
HMGB1P1-201ENST00000522557 SEMA3EO15041 775 aa11.03□□□□□ -0.64
HMGB1P1-201ENST00000522557 COL9A1P20849 921 aa11.03□□□□□ -0.64
HMGB1P1-201ENST00000522557 OSBPP22059 807 aa11.03□□□□□ -0.64
HMGB1P1-201ENST00000522557 EN1Q05925 392 aaPredicted RBP11.02□□□□□ -0.65
HMGB1P1-201ENST00000522557 ADGRD1Q6QNK2 874 aa11.02□□□□□ -0.65
HMGB1P1-201ENST00000522557 MAP3K7O43318 606 aa11.01□□□□□ -0.65
HMGB1P1-201ENST00000522557 MMRN1Q13201 1228 aa11.01□□□□□ -0.65
HMGB1P1-201ENST00000522557 TSR1Q2NL82 804 aaKnown RBP11.01□□□□□ -0.65
HMGB1P1-201ENST00000522557 TK2O00142 265 aa11□□□□□ -0.65
HMGB1P1-201ENST00000522557 ZBED2Q9BTP6 218 aa11□□□□□ -0.65
HMGB1P1-201ENST00000522557 VPS9D1Q9Y2B5 631 aa10.99□□□□□ -0.65
HMGB1P1-201ENST00000522557 BCANQ96GW7 911 aa10.98□□□□□ -0.65
HMGB1P1-201ENST00000522557 PPP1R3GB7ZBB8 358 aa10.97□□□□□ -0.65
HMGB1P1-201ENST00000522557 SLC4A5Q9BY07 1137 aa10.97□□□□□ -0.65
HMGB1P1-201ENST00000522557 HRO43593 1189 aa10.96□□□□□ -0.65
HMGB1P1-201ENST00000522557 PROX2Q3B8N5 592 aa10.96□□□□□ -0.65
HMGB1P1-201ENST00000522557 CDHR5Q9HBB8 845 aa10.94□□□□□ -0.66
HMGB1P1-201ENST00000522557 MYT1LQ9UL68 1186 aa10.94□□□□□ -0.66
HMGB1P1-201ENST00000522557 TESPA1A2RU30 521 aaPredicted RBP10.93□□□□□ -0.66
HMGB1P1-201ENST00000522557 BHMG1C9JSJ3 638 aaPredicted RBP10.9□□□□□ -0.66
HMGB1P1-201ENST00000522557 RNF166Q96A37 237 aaPredicted RBP10.89□□□□□ -0.67
HMGB1P1-201ENST00000522557 NPDC1Q9NQX5 325 aaPredicted RBP10.89□□□□□ -0.67
HMGB1P1-201ENST00000522557 STAC3Q96MF2 364 aa10.88□□□□□ -0.67
HMGB1P1-201ENST00000522557 KIAA1468Q9P260 1216 aa10.88□□□□□ -0.67
HMGB1P1-201ENST00000522557 TRIM6-TRIM34B2RNG4 842 aa10.87□□□□□ -0.67
HMGB1P1-201ENST00000522557 RABGEF1Q9UJ41 708 aa10.87□□□□□ -0.67
HMGB1P1-201ENST00000522557 RBM26Q5T8P6 1007 aaKnown RBP10.86□□□□□ -0.67
HMGB1P1-201ENST00000522557 CDCA7LQ96GN5 454 aa10.86□□□□□ -0.67
HMGB1P1-201ENST00000522557 TSKSQ9UJT2 592 aa10.86□□□□□ -0.67
HMGB1P1-201ENST00000522557 NUTM2FA1L443 756 aa10.85□□□□□ -0.67
HMGB1P1-201ENST00000522557 ONECUT3O60422 494 aaPredicted RBP10.85□□□□□ -0.67
HMGB1P1-201ENST00000522557 PRSS12P56730 875 aa10.85□□□□□ -0.67
HMGB1P1-201ENST00000522557 CERKQ8TCT0 537 aa10.85□□□□□ -0.67
HMGB1P1-201ENST00000522557 FAM198AQ9UFP1 575 aa10.85□□□□□ -0.67
HMGB1P1-201ENST00000522557 SMYD5Q6GMV2 418 aa10.84□□□□□ -0.67
HMGB1P1-201ENST00000522557 MRPL50Q8N5N7 158 aaKnown RBP10.83□□□□□ -0.68
HMGB1P1-201ENST00000522557 C3orf80F5H4A9 247 aa10.81□□□□□ -0.68
HMGB1P1-201ENST00000522557 PTGDRQ13258 359 aa10.81□□□□□ -0.68
HMGB1P1-201ENST00000522557 KCTD12Q96CX2 325 aaKnown RBP10.81□□□□□ -0.68
HMGB1P1-201ENST00000522557 NBPF3Q9H094 633 aa10.81□□□□□ -0.68
HMGB1P1-201ENST00000522557 SEPT9Q9UHD8 586 aaPredicted RBP10.81□□□□□ -0.68
HMGB1P1-201ENST00000522557 PACS2Q86VP3 889 aa10.8□□□□□ -0.68
HMGB1P1-201ENST00000522557 SMAPO00193 183 aa10.79□□□□□ -0.68
HMGB1P1-201ENST00000522557 PADI6Q6TGC4 694 aa10.79□□□□□ -0.68
HMGB1P1-201ENST00000522557 GOLGA8CPA6NN73 597 aa10.78□□□□□ -0.68
HMGB1P1-201ENST00000522557 TTC13Q8NBP0 860 aa10.78□□□□□ -0.68
HMGB1P1-201ENST00000522557 PRKCSHP14314 528 aaPredicted RBP10.76□□□□□ -0.69
HMGB1P1-201ENST00000522557 RBM27Q9P2N5 1060 aaKnown RBP10.76□□□□□ -0.69
HMGB1P1-201ENST00000522557 FCHSD2O94868 740 aa10.75□□□□□ -0.69
HMGB1P1-201ENST00000522557 LAPTM4BQ86VI4 370 aa10.75□□□□□ -0.69
HMGB1P1-201ENST00000522557 TATDN2Q93075 761 aa10.75□□□□□ -0.69
HMGB1P1-201ENST00000522557 WNT2BQ93097 391 aa10.75□□□□□ -0.69
HMGB1P1-201ENST00000522557 PNMA3Q9UL41 463 aa10.75□□□□□ -0.69
HMGB1P1-201ENST00000522557 NUDT18Q6ZVK8 323 aa10.74□□□□□ -0.69
HMGB1P1-201ENST00000522557 ZFRQ96KR1 1074 aaKnown RBP10.74□□□□□ -0.69
HMGB1P1-201ENST00000522557 FAM98CQ17RN3 349 aaKnown RBP10.73□□□□□ -0.69
HMGB1P1-201ENST00000522557 NBPF26B4DH59 902 aa10.71□□□□□ -0.69
HMGB1P1-201ENST00000522557 GPR37O15354 613 aa10.71□□□□□ -0.69
HMGB1P1-201ENST00000522557 PTPN5P54829 565 aa10.71□□□□□ -0.69
HMGB1P1-201ENST00000522557 THSD4Q6ZMP0 1018 aa10.71□□□□□ -0.69
HMGB1P1-201ENST00000522557 FECHP22830 423 aa10.7□□□□□ -0.7
HMGB1P1-201ENST00000522557 FAM161AQ3B820 660 aa10.7□□□□□ -0.7
HMGB1P1-201ENST00000522557 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.7□□□□□ -0.7
HMGB1P1-201ENST00000522557 HCSTQ9UBK5 93 aa10.7□□□□□ -0.7
HMGB1P1-201ENST00000522557 TULP1O00294 542 aaPredicted RBP10.69□□□□□ -0.7
HMGB1P1-201ENST00000522557 HIC1Q14526 733 aa10.69□□□□□ -0.7
HMGB1P1-201ENST00000522557 GPIHBP1Q8IV16 184 aa10.69□□□□□ -0.7
HMGB1P1-201ENST00000522557 ANKK1Q8NFD2 765 aa10.69□□□□□ -0.7
HMGB1P1-201ENST00000522557 BCAMP50895 628 aa10.68□□□□□ -0.7
HMGB1P1-201ENST00000522557 EYA1Q99502 592 aa10.68□□□□□ -0.7
HMGB1P1-201ENST00000522557 GNPATO15228 680 aa10.67□□□□□ -0.7
HMGB1P1-201ENST00000522557 SOWAHBA6NEL2 793 aa10.66□□□□□ -0.7
HMGB1P1-201ENST00000522557 ADGRG1Q9Y653 693 aa10.66□□□□□ -0.7
HMGB1P1-201ENST00000522557 SAMD7Q7Z3H4 446 aa10.65□□□□□ -0.7
HMGB1P1-201ENST00000522557 LMOD2Q6P5Q4 547 aa10.64□□□□□ -0.71
HMGB1P1-201ENST00000522557 TPRNQ4KMQ1 711 aa10.63□□□□□ -0.71
HMGB1P1-201ENST00000522557 LRCH3Q96II8 777 aa10.63□□□□□ -0.71
HMGB1P1-201ENST00000522557 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.63□□□□□ -0.71
HMGB1P1-201ENST00000522557 RBM46Q8TBY0 533 aaKnown RBP10.61□□□□□ -0.71
HMGB1P1-201ENST00000522557 SWT1Q5T5J6 900 aaKnown RBP10.6□□□□□ -0.71
HMGB1P1-201ENST00000522557 WBP1LQ9NX94 342 aa10.6□□□□□ -0.71
HMGB1P1-201ENST00000522557 HPS5Q9UPZ3 1129 aa10.6□□□□□ -0.71
HMGB1P1-201ENST00000522557 RCCD1A6NED2 376 aa10.58□□□□□ -0.72
HMGB1P1-201ENST00000522557 HDGFP51858 240 aaKnown RBP10.58□□□□□ -0.72
HMGB1P1-201ENST00000522557 PXYLP1Q8TE99 480 aa10.58□□□□□ -0.72
HMGB1P1-201ENST00000522557 TSR3Q9UJK0 312 aaKnown RBP10.58□□□□□ -0.72
HMGB1P1-201ENST00000522557 OATP04181 439 aa10.57□□□□□ -0.72
HMGB1P1-201ENST00000522557 DNAJB2P25686 324 aa10.56□□□□□ -0.72
HMGB1P1-201ENST00000522557 PPP4CP60510 307 aa10.56□□□□□ -0.72
HMGB1P1-201ENST00000522557 METTL3Q86U44 580 aaKnown RBP10.56□□□□□ -0.72
HMGB1P1-201ENST00000522557 RNF40O75150 1001 aa10.55□□□□□ -0.72
HMGB1P1-201ENST00000522557 NLRP7Q8WX94 980 aa10.54□□□□□ -0.72
HMGB1P1-201ENST00000522557 TMEM134Q9H6X4 195 aa10.54□□□□□ -0.72
HMGB1P1-201ENST00000522557 ZC3H15Q8WU90 426 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms