RNA–Protein interactions for RNA: ENST00000522411.5

LSS-211, Transcript of lanosterol synthase, humanhuman

TSL 2 BASIC

Gene LSS, Length 2,523 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-211ENST00000522411 ABCC10Q5T3U5 1492 aa19.29■□□□□ 0.68
LSS-211ENST00000522411 DCAF11Q8TEB1 546 aa19.28■□□□□ 0.68
LSS-211ENST00000522411 KIF15Q9NS87 1388 aa19.28■□□□□ 0.68
LSS-211ENST00000522411 RALGAPBQ86X10 1494 aa19.28■□□□□ 0.68
LSS-211ENST00000522411 NBR1Q14596 966 aa19.28■□□□□ 0.68
LSS-211ENST00000522411 ZCCHC11Q5TAX3 1644 aaKnown RBP19.27■□□□□ 0.68
LSS-211ENST00000522411 RIMBP3CA6NJZ7 1639 aa19.26■□□□□ 0.67
LSS-211ENST00000522411 RIMBP3BA6NNM3 1639 aa19.26■□□□□ 0.67
LSS-211ENST00000522411 RIMBP3Q9UFD9 1639 aa19.26■□□□□ 0.67
LSS-211ENST00000522411 DEKP35659 375 aaKnown RBP19.26■□□□□ 0.67
LSS-211ENST00000522411 SALL2Q9Y467 1007 aaPredicted RBP19.26■□□□□ 0.67
LSS-211ENST00000522411 UHRF1BP1LA0JNW5 1464 aa19.25■□□□□ 0.67
LSS-211ENST00000522411 NPM1P06748 294 aaKnown RBP eCLIP19.25■□□□□ 0.67
LSS-211ENST00000522411 LRPPRCP42704 1394 aaKnown RBP19.24■□□□□ 0.67
LSS-211ENST00000522411 C9orf84Q5VXU9 1444 aa19.24■□□□□ 0.67
LSS-211ENST00000522411 MYBBP1AQ9BQG0 1328 aaKnown RBP19.24■□□□□ 0.67
LSS-211ENST00000522411 MYT1LQ9UL68 1186 aa19.24■□□□□ 0.67
LSS-211ENST00000522411 SHANK2Q9UPX8 1470 aa19.24■□□□□ 0.67
LSS-211ENST00000522411 TSPY4P0CV99 314 aa19.22■□□□□ 0.67
LSS-211ENST00000522411 TSPY10P0CW01 314 aa19.22■□□□□ 0.67
LSS-211ENST00000522411 ANP32AP39687 249 aaKnown RBP19.22■□□□□ 0.67
LSS-211ENST00000522411 RALBP1Q15311 655 aa19.22■□□□□ 0.67
LSS-211ENST00000522411 BRD4O60885 1362 aaPredicted RBP19.22■□□□□ 0.67
LSS-211ENST00000522411 IPO9Q96P70 1041 aaKnown RBP19.22■□□□□ 0.67
LSS-211ENST00000522411 HNRNPMP52272 730 aaKnown RBP eCLIP19.21■□□□□ 0.673e-7■■■■□ 23.6
LSS-211ENST00000522411 EXOC6Q8TAG9 804 aa19.2■□□□□ 0.66
LSS-211ENST00000522411 RRP1P56182 461 aaKnown RBP19.19■□□□□ 0.66
LSS-211ENST00000522411 ARHGEF12Q9NZN5 1544 aa19.19■□□□□ 0.66
LSS-211ENST00000522411 KDM5DQ9BY66 1539 aa19.17■□□□□ 0.66
LSS-211ENST00000522411 ASXL2Q76L83 1435 aa19.17■□□□□ 0.66
LSS-211ENST00000522411 ZBTB47Q9UFB7 747 aaPredicted RBP19.16■□□□□ 0.66
LSS-211ENST00000522411 RCAN3Q9UKA8 241 aa19.16■□□□□ 0.66
LSS-211ENST00000522411 KTN1Q86UP2 1357 aaKnown RBP19.15■□□□□ 0.66
LSS-211ENST00000522411 ARHGEF5Q12774 1597 aa19.15■□□□□ 0.66
LSS-211ENST00000522411 CDC42BPBQ9Y5S2 1711 aa19.15■□□□□ 0.66
LSS-211ENST00000522411 RGL3Q3MIN7 710 aa19.14■□□□□ 0.65
LSS-211ENST00000522411 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.14■□□□□ 0.657e-7■■□□□ 13.3
LSS-211ENST00000522411 TTC37Q6PGP7 1564 aa19.14■□□□□ 0.65
LSS-211ENST00000522411 NBPF1Q3BBV0 1214 aa19.14■□□□□ 0.65
LSS-211ENST00000522411 SAMD9LQ8IVG5 1584 aa19.13■□□□□ 0.65
LSS-211ENST00000522411 NLRP13Q86W25 1043 aa19.13■□□□□ 0.65
LSS-211ENST00000522411 CDCA7LQ96GN5 454 aa19.12■□□□□ 0.65
LSS-211ENST00000522411 WDR7Q9Y4E6 1490 aa19.11■□□□□ 0.65
LSS-211ENST00000522411 NPM2Q86SE8 214 aaKnown RBP19.11■□□□□ 0.65
LSS-211ENST00000522411 PREX2Q70Z35 1606 aa19.11■□□□□ 0.65
LSS-211ENST00000522411 PER1O15534 1290 aaPredicted RBP19.11■□□□□ 0.65
LSS-211ENST00000522411 E9PCH4 1651 aa19.1■□□□□ 0.65
LSS-211ENST00000522411 PARD3Q8TEW0 1356 aa19.1■□□□□ 0.65
LSS-211ENST00000522411 CC2D1BQ5T0F9 858 aaKnown RBP19.09■□□□□ 0.65
LSS-211ENST00000522411 CCDC141Q6ZP82 1450 aa19.08■□□□□ 0.65
LSS-211ENST00000522411 PRAG1Q86YV5 1406 aa19.07■□□□□ 0.64
LSS-211ENST00000522411 PLIN1O60240 522 aa19.07■□□□□ 0.64
LSS-211ENST00000522411 PDE3BQ13370 1112 aa19.07■□□□□ 0.64
LSS-211ENST00000522411 TCERG1O14776 1098 aaKnown RBP19.06■□□□□ 0.64
LSS-211ENST00000522411 FAM135AQ9P2D6 1515 aa19.06■□□□□ 0.64
LSS-211ENST00000522411 PDE4AP27815 886 aa19.06■□□□□ 0.64
LSS-211ENST00000522411 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.06■□□□□ 0.641e-7■□□□□ 10.3
LSS-211ENST00000522411 ARHGAP5Q13017 1502 aa19.05■□□□□ 0.64
LSS-211ENST00000522411 CCDC144AA2RUR9 1427 aa19.05■□□□□ 0.64
LSS-211ENST00000522411 SYCP2Q9BX26 1530 aa19.04■□□□□ 0.64
LSS-211ENST00000522411 RTL5Q5HYW3 569 aaPredicted RBP19.03■□□□□ 0.64
LSS-211ENST00000522411 PANK3Q9H999 370 aa19.03■□□□□ 0.64
LSS-211ENST00000522411 TRPM1Q7Z4N2 1603 aa19.03■□□□□ 0.64
LSS-211ENST00000522411 DISP3Q9P2K9 1392 aa19.02■□□□□ 0.64
LSS-211ENST00000522411 TESK2Q96S53 571 aa19.02■□□□□ 0.63
LSS-211ENST00000522411 PLCH2O75038 1416 aa19.01■□□□□ 0.63
LSS-211ENST00000522411 EFCAB2Q5VUJ9 269 aa19.01■□□□□ 0.63
LSS-211ENST00000522411 SKAP1Q86WV1 359 aa19.01■□□□□ 0.63
LSS-211ENST00000522411 BACH2Q9BYV9 841 aa19.01■□□□□ 0.63
LSS-211ENST00000522411 PLA2R1Q13018 1463 aa19■□□□□ 0.63
LSS-211ENST00000522411 FAM69CQ0P6D2 419 aa18.99■□□□□ 0.63
LSS-211ENST00000522411 MYO5CQ9NQX4 1742 aa18.98■□□□□ 0.63
LSS-211ENST00000522411 A2MP01023 1474 aa18.98■□□□□ 0.63
LSS-211ENST00000522411 RSPH4AQ5TD94 716 aa18.98■□□□□ 0.63
LSS-211ENST00000522411 AFAP1Q8N556 730 aa18.98■□□□□ 0.63
LSS-211ENST00000522411 CRBNQ96SW2 442 aa18.98■□□□□ 0.63
LSS-211ENST00000522411 UNC13BO14795 1591 aa18.98■□□□□ 0.63
LSS-211ENST00000522411 GPRASP1Q5JY77 1395 aa18.97■□□□□ 0.63
LSS-211ENST00000522411 MAST1Q9Y2H9 1570 aa18.97■□□□□ 0.63
LSS-211ENST00000522411 COL17A1Q9UMD9 1497 aaPredicted RBP18.97■□□□□ 0.63
LSS-211ENST00000522411 WASHC2CQ9Y4E1 1318 aa18.96■□□□□ 0.63
LSS-211ENST00000522411 MS4A1P11836 297 aa18.96■□□□□ 0.63
LSS-211ENST00000522411 LAS1LQ9Y4W2 734 aaKnown RBP18.96■□□□□ 0.63
LSS-211ENST00000522411 CD109Q6YHK3 1445 aa18.94■□□□□ 0.62
LSS-211ENST00000522411 ERBINQ96RT1 1412 aa18.94■□□□□ 0.62
LSS-211ENST00000522411 TMF1P82094 1093 aa18.94■□□□□ 0.62
LSS-211ENST00000522411 BLMP54132 1417 aaPredicted RBP18.93■□□□□ 0.62
LSS-211ENST00000522411 ADAMTS8Q9UP79 889 aa18.93■□□□□ 0.62
LSS-211ENST00000522411 C20orf194Q5TEA3 1177 aa18.93■□□□□ 0.62
LSS-211ENST00000522411 PLXNC1O60486 1568 aa18.92■□□□□ 0.62
LSS-211ENST00000522411 ABCA9Q8IUA7 1624 aa18.91■□□□□ 0.62
LSS-211ENST00000522411 PRDM15P57071 1507 aaPredicted RBP18.91■□□□□ 0.62
LSS-211ENST00000522411 FANCAO15360 1455 aa18.91■□□□□ 0.62
LSS-211ENST00000522411 PLEKHH2Q8IVE3 1493 aa18.91■□□□□ 0.62
LSS-211ENST00000522411 IQGAP3Q86VI3 1631 aa18.91■□□□□ 0.62
LSS-211ENST00000522411 TRAPPC8Q9Y2L5 1435 aa18.9■□□□□ 0.62
LSS-211ENST00000522411 DNAJC5Q9H3Z4 198 aa18.9■□□□□ 0.62
LSS-211ENST00000522411 NEFMP07197 916 aa18.89■□□□□ 0.61
LSS-211ENST00000522411 INSRP06213 1382 aa18.87■□□□□ 0.61
LSS-211ENST00000522411 SCAPERQ9BY12 1400 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms