RNA–Protein interactions for RNA: ENST00000522088.1

EIF3E-213, Transcript of eukaryotic translation initiation factor 3 subunit E, humanhuman

TSL 3

Gene EIF3E, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3E-213ENST00000522088 RABGEF1Q9UJ41 708 aa13.14□□□□□ -0.31
EIF3E-213ENST00000522088 ANKK1Q8NFD2 765 aa13.13□□□□□ -0.31
EIF3E-213ENST00000522088 CAMK2BQ13554 666 aa13.1□□□□□ -0.31
EIF3E-213ENST00000522088 RBM33Q96EV2 1170 aaKnown RBP13.1□□□□□ -0.31
EIF3E-213ENST00000522088 DDX12PQ92771 950 aa13.09□□□□□ -0.31
EIF3E-213ENST00000522088 EPAS1Q99814 870 aa13.09□□□□□ -0.31
EIF3E-213ENST00000522088 BCAMP50895 628 aa13.08□□□□□ -0.32
EIF3E-213ENST00000522088 C6orf132Q5T0Z8 1188 aa13.07□□□□□ -0.32
EIF3E-213ENST00000522088 BBXQ8WY36 941 aaPredicted RBP13.07□□□□□ -0.32
EIF3E-213ENST00000522088 KIAA1468Q9P260 1216 aa13.07□□□□□ -0.32
EIF3E-213ENST00000522088 SEPT9Q9UHD8 586 aaPredicted RBP13.06□□□□□ -0.32
EIF3E-213ENST00000522088 A0A0G2JS52 829 aa13.03□□□□□ -0.32
EIF3E-213ENST00000522088 IFFO2Q5TF58 517 aa13.03□□□□□ -0.32
EIF3E-213ENST00000522088 LAPTM4BQ86VI4 370 aa13.03□□□□□ -0.32
EIF3E-213ENST00000522088 NBR1Q14596 966 aa13.02□□□□□ -0.33
EIF3E-213ENST00000522088 ZFRQ96KR1 1074 aaKnown RBP13.02□□□□□ -0.33
EIF3E-213ENST00000522088 SOWAHBA6NEL2 793 aa13□□□□□ -0.33
EIF3E-213ENST00000522088 TRIM6-TRIM34B2RNG4 842 aa13□□□□□ -0.33
EIF3E-213ENST00000522088 MAP3K7O43318 606 aa12.99□□□□□ -0.33
EIF3E-213ENST00000522088 SPRYD3Q8NCJ5 442 aa12.98□□□□□ -0.33
EIF3E-213ENST00000522088 TSR1Q2NL82 804 aaKnown RBP12.96□□□□□ -0.33
EIF3E-213ENST00000522088 WBP1LQ9NX94 342 aa12.96□□□□□ -0.33
EIF3E-213ENST00000522088 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.96□□□□□ -0.33
EIF3E-213ENST00000522088 ONECUT3O60422 494 aaPredicted RBP12.95□□□□□ -0.34
EIF3E-213ENST00000522088 EN1Q05925 392 aaPredicted RBP12.95□□□□□ -0.34
EIF3E-213ENST00000522088 PDIA6Q15084 440 aa12.95□□□□□ -0.34
EIF3E-213ENST00000522088 FAM98CQ17RN3 349 aaKnown RBP12.95□□□□□ -0.34
EIF3E-213ENST00000522088 RGS20O76081 388 aa12.94□□□□□ -0.34
EIF3E-213ENST00000522088 LRCH3Q96II8 777 aa12.93□□□□□ -0.34
EIF3E-213ENST00000522088 IRX2Q9BZI1 471 aaPredicted RBP12.93□□□□□ -0.34
EIF3E-213ENST00000522088 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.93□□□□□ -0.34
EIF3E-213ENST00000522088 ITGBL1O95965 494 aaPredicted RBP12.92□□□□□ -0.34
EIF3E-213ENST00000522088 NYAP1Q6ZVC0 841 aa12.91□□□□□ -0.34
EIF3E-213ENST00000522088 CFAP44Q96MT7 982 aa12.91□□□□□ -0.34
EIF3E-213ENST00000522088 HPS5Q9UPZ3 1129 aa12.91□□□□□ -0.34
EIF3E-213ENST00000522088 SPDYE16A6NNV3 312 aaPredicted RBP12.89□□□□□ -0.35
EIF3E-213ENST00000522088 PACS2Q86VP3 889 aa12.89□□□□□ -0.35
EIF3E-213ENST00000522088 TSKSQ9UJT2 592 aa12.89□□□□□ -0.35
EIF3E-213ENST00000522088 GRXCR2A6NFK2 248 aa12.88□□□□□ -0.35
EIF3E-213ENST00000522088 E2F4Q16254 413 aa12.88□□□□□ -0.35
EIF3E-213ENST00000522088 PAXIP1Q6ZW49 1069 aaPredicted RBP12.88□□□□□ -0.35
EIF3E-213ENST00000522088 WDR70Q9NW82 654 aa12.88□□□□□ -0.35
EIF3E-213ENST00000522088 TSR3Q9UJK0 312 aaKnown RBP12.87□□□□□ -0.35
EIF3E-213ENST00000522088 KCNC4Q03721 635 aa12.86□□□□□ -0.35
EIF3E-213ENST00000522088 SMAPO00193 183 aa12.85□□□□□ -0.35
EIF3E-213ENST00000522088 AMER1Q5JTC6 1135 aaPredicted RBP12.84□□□□□ -0.35
EIF3E-213ENST00000522088 CDCA7LQ96GN5 454 aa12.84□□□□□ -0.35
EIF3E-213ENST00000522088 PRIM1P49642 420 aaKnown RBP12.8□□□□□ -0.36
EIF3E-213ENST00000522088 PRSS12P56730 875 aa12.8□□□□□ -0.36
EIF3E-213ENST00000522088 PPP4CP60510 307 aa12.8□□□□□ -0.36
EIF3E-213ENST00000522088 RNF40O75150 1001 aa12.79□□□□□ -0.36
EIF3E-213ENST00000522088 SAMD7Q7Z3H4 446 aa12.79□□□□□ -0.36
EIF3E-213ENST00000522088 NBPF26B4DH59 902 aa12.78□□□□□ -0.36
EIF3E-213ENST00000522088 CERKQ8TCT0 537 aa12.78□□□□□ -0.36
EIF3E-213ENST00000522088 CDHR5Q9HBB8 845 aa12.78□□□□□ -0.36
EIF3E-213ENST00000522088 PNMA3Q9UL41 463 aa12.78□□□□□ -0.36
EIF3E-213ENST00000522088 RTN4Q9NQC3 1192 aaKnown RBP12.77□□□□□ -0.37
EIF3E-213ENST00000522088 FAM198AQ9UFP1 575 aa12.77□□□□□ -0.37
EIF3E-213ENST00000522088 TATDN2Q93075 761 aa12.74□□□□□ -0.37
EIF3E-213ENST00000522088 C3orf80F5H4A9 247 aa12.73□□□□□ -0.37
EIF3E-213ENST00000522088 ARIH1Q9Y4X5 557 aaPredicted RBP12.73□□□□□ -0.37
EIF3E-213ENST00000522088 OSBPP22059 807 aa12.71□□□□□ -0.37
EIF3E-213ENST00000522088 NUDT18Q6ZVK8 323 aa12.71□□□□□ -0.37
EIF3E-213ENST00000522088 Q6ZNB5 142 aa12.7□□□□□ -0.38
EIF3E-213ENST00000522088 HDGFP51858 240 aaKnown RBP12.68□□□□□ -0.38
EIF3E-213ENST00000522088 MTRQ99707 1265 aa12.66□□□□□ -0.38
EIF3E-213ENST00000522088 TJAP1Q5JTD0 557 aa12.65□□□□□ -0.38
EIF3E-213ENST00000522088 PADI6Q6TGC4 694 aa12.64□□□□□ -0.39
EIF3E-213ENST00000522088 RBM27Q9P2N5 1060 aaKnown RBP12.64□□□□□ -0.39
EIF3E-213ENST00000522088 IL21Q9HBE4 155 aa12.63□□□□□ -0.39
EIF3E-213ENST00000522088 APLP1P51693 650 aa12.6□□□□□ -0.39
EIF3E-213ENST00000522088 SWT1Q5T5J6 900 aaKnown RBP12.6□□□□□ -0.39
EIF3E-213ENST00000522088 ZNF516Q92618 1163 aa12.58□□□□□ -0.4
EIF3E-213ENST00000522088 PPP1R18Q6NYC8 613 aa12.57□□□□□ -0.4
EIF3E-213ENST00000522088 PRKD2Q9BZL6 878 aa12.57□□□□□ -0.4
EIF3E-213ENST00000522088 COPS2P61201 443 aa12.56□□□□□ -0.4
EIF3E-213ENST00000522088 SLF2Q8IX21 1173 aa12.56□□□□□ -0.4
EIF3E-213ENST00000522088 NPDC1Q9NQX5 325 aaPredicted RBP12.56□□□□□ -0.4
EIF3E-213ENST00000522088 NECTIN2Q92692 538 aa12.55□□□□□ -0.4
EIF3E-213ENST00000522088 GFRA3O60609 400 aa12.54□□□□□ -0.4
EIF3E-213ENST00000522088 MLLT3P42568 568 aaPredicted RBP12.54□□□□□ -0.4
EIF3E-213ENST00000522088 SLC4A3P48751 1232 aa12.54□□□□□ -0.4
EIF3E-213ENST00000522088 TTC13Q8NBP0 860 aa12.54□□□□□ -0.4
EIF3E-213ENST00000522088 LAPTM4AQ15012 233 aa12.53□□□□□ -0.4
EIF3E-213ENST00000522088 NKX2-3Q8TAU0 364 aa12.51□□□□□ -0.41
EIF3E-213ENST00000522088 KCNV2Q8TDN2 545 aa12.51□□□□□ -0.41
EIF3E-213ENST00000522088 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.51□□□□□ -0.41
EIF3E-213ENST00000522088 TSHZ2Q9NRE2 1034 aa12.51□□□□□ -0.41
EIF3E-213ENST00000522088 ARHGEF1Q92888 912 aaKnown RBP12.48□□□□□ -0.41
EIF3E-213ENST00000522088 GGCXP38435 758 aa12.46□□□□□ -0.41
EIF3E-213ENST00000522088 EYA1Q99502 592 aa12.46□□□□□ -0.41
EIF3E-213ENST00000522088 PCDHB3Q9Y5E6 796 aa12.45□□□□□ -0.42
EIF3E-213ENST00000522088 V9GY48 417 aaPredicted RBP12.45□□□□□ -0.42
EIF3E-213ENST00000522088 NUTM2FA1L443 756 aa12.43□□□□□ -0.42
EIF3E-213ENST00000522088 PRR14Q9BWN1 585 aa12.43□□□□□ -0.42
EIF3E-213ENST00000522088 NRG2O14511 850 aaPredicted RBP12.42□□□□□ -0.42
EIF3E-213ENST00000522088 ZPR1O75312 459 aa12.42□□□□□ -0.42
EIF3E-213ENST00000522088 DNAJB2P25686 324 aa12.42□□□□□ -0.42
EIF3E-213ENST00000522088 PTGDRQ13258 359 aa12.42□□□□□ -0.42
EIF3E-213ENST00000522088 TRAF7Q6Q0C0 670 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms