RNA–Protein interactions for RNA: ENST00000521745.1

CDH12-207, Transcript of cadherin 12, humanhuman

TSL 4

Gene CDH12, Length 566 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-207ENST00000521745 WDR70Q9NW82 654 aa9.35□□□□□ -0.91
CDH12-207ENST00000521745 RSF1Q96T23 1441 aaPredicted RBP9.34□□□□□ -0.91
CDH12-207ENST00000521745 ADAM33Q9BZ11 813 aa9.34□□□□□ -0.91
CDH12-207ENST00000521745 SMARCA4P51532 1647 aa9.34□□□□□ -0.91
CDH12-207ENST00000521745 VPS9D1Q9Y2B5 631 aa9.33□□□□□ -0.92
CDH12-207ENST00000521745 MROH2BQ7Z745 1585 aa9.33□□□□□ -0.92
CDH12-207ENST00000521745 HRO43593 1189 aa9.32□□□□□ -0.92
CDH12-207ENST00000521745 FBXW7Q969H0 707 aa9.32□□□□□ -0.92
CDH12-207ENST00000521745 PCDHGA10Q9Y5H3 936 aa9.32□□□□□ -0.92
CDH12-207ENST00000521745 PHF14O94880 888 aa9.31□□□□□ -0.92
CDH12-207ENST00000521745 TYW1BQ6NUM6 668 aa9.31□□□□□ -0.92
CDH12-207ENST00000521745 HCSTQ9UBK5 93 aa9.31□□□□□ -0.92
CDH12-207ENST00000521745 KCTD12Q96CX2 325 aaKnown RBP9.29□□□□□ -0.92
CDH12-207ENST00000521745 SLC4A5Q9BY07 1137 aa9.29□□□□□ -0.92
CDH12-207ENST00000521745 GOLGA8CPA6NN73 597 aa9.28□□□□□ -0.92
CDH12-207ENST00000521745 E2F4Q16254 413 aa9.28□□□□□ -0.92
CDH12-207ENST00000521745 EPAS1Q99814 870 aa9.28□□□□□ -0.92
CDH12-207ENST00000521745 ZBED2Q9BTP6 218 aa9.28□□□□□ -0.92
CDH12-207ENST00000521745 WIZO95785 1651 aa9.28□□□□□ -0.92
CDH12-207ENST00000521745 PPP1R3GB7ZBB8 358 aa9.27□□□□□ -0.93
CDH12-207ENST00000521745 MRPL50Q8N5N7 158 aaKnown RBP9.26□□□□□ -0.93
CDH12-207ENST00000521745 DDX12PQ92771 950 aa9.26□□□□□ -0.93
CDH12-207ENST00000521745 NBPF3Q9H094 633 aa9.26□□□□□ -0.93
CDH12-207ENST00000521745 EIF4G1Q04637 1599 aaKnown RBP9.25□□□□□ -0.93
CDH12-207ENST00000521745 RBM33Q96EV2 1170 aaKnown RBP9.25□□□□□ -0.93
CDH12-207ENST00000521745 SPDYE16A6NNV3 312 aaPredicted RBP9.24□□□□□ -0.93
CDH12-207ENST00000521745 PDIA6Q15084 440 aa9.24□□□□□ -0.93
CDH12-207ENST00000521745 SMARCA2P51531 1590 aa9.24□□□□□ -0.93
CDH12-207ENST00000521745 COL9A1P20849 921 aa9.22□□□□□ -0.93
CDH12-207ENST00000521745 NBR1Q14596 966 aa9.22□□□□□ -0.93
CDH12-207ENST00000521745 C6orf132Q5T0Z8 1188 aa9.22□□□□□ -0.93
CDH12-207ENST00000521745 PTPN5P54829 565 aa9.21□□□□□ -0.94
CDH12-207ENST00000521745 BHMG1C9JSJ3 638 aaPredicted RBP9.2□□□□□ -0.94
CDH12-207ENST00000521745 PROX2Q3B8N5 592 aa9.2□□□□□ -0.94
CDH12-207ENST00000521745 WNT2BQ93097 391 aa9.2□□□□□ -0.94
CDH12-207ENST00000521745 PLA2G2EQ9NZK7 142 aa9.2□□□□□ -0.94
CDH12-207ENST00000521745 RABGEF1Q9UJ41 708 aa9.2□□□□□ -0.94
CDH12-207ENST00000521745 MAP3K7O43318 606 aa9.19□□□□□ -0.94
CDH12-207ENST00000521745 ATAD2BQ9ULI0 1458 aa9.19□□□□□ -0.94
CDH12-207ENST00000521745 TOP2AP11388 1531 aaKnown RBP9.19□□□□□ -0.94
CDH12-207ENST00000521745 PEG3Q9GZU2 1588 aa9.19□□□□□ -0.94
CDH12-207ENST00000521745 BAZ1BQ9UIG0 1483 aaKnown RBP9.18□□□□□ -0.94
CDH12-207ENST00000521745 GRXCR2A6NFK2 248 aa9.17□□□□□ -0.94
CDH12-207ENST00000521745 TSHZ2Q9NRE2 1034 aa9.17□□□□□ -0.94
CDH12-207ENST00000521745 EN1Q05925 392 aaPredicted RBP9.16□□□□□ -0.94
CDH12-207ENST00000521745 THSD4Q6ZMP0 1018 aa9.16□□□□□ -0.94
CDH12-207ENST00000521745 KIAA1468Q9P260 1216 aa9.16□□□□□ -0.94
CDH12-207ENST00000521745 ARIH1Q9Y4X5 557 aaPredicted RBP9.16□□□□□ -0.94
CDH12-207ENST00000521745 ANKK1Q8NFD2 765 aa9.15□□□□□ -0.94
CDH12-207ENST00000521745 CC2D2AQ9P2K1 1620 aa9.15□□□□□ -0.94
CDH12-207ENST00000521745 TSR1Q2NL82 804 aaKnown RBP9.14□□□□□ -0.95
CDH12-207ENST00000521745 TRIM6-TRIM34B2RNG4 842 aa9.13□□□□□ -0.95
CDH12-207ENST00000521745 ONECUT3O60422 494 aaPredicted RBP9.13□□□□□ -0.95
CDH12-207ENST00000521745 LAPTM4BQ86VI4 370 aa9.13□□□□□ -0.95
CDH12-207ENST00000521745 NCAPD3P42695 1498 aa9.13□□□□□ -0.95
CDH12-207ENST00000521745 HMGXB3Q12766 1538 aa9.12□□□□□ -0.95
CDH12-207ENST00000521745 PACS2Q86VP3 889 aa9.11□□□□□ -0.95
CDH12-207ENST00000521745 SEPT9Q9UHD8 586 aaPredicted RBP9.11□□□□□ -0.95
CDH12-207ENST00000521745 ZFRQ96KR1 1074 aaKnown RBP9.09□□□□□ -0.95
CDH12-207ENST00000521745 CERKQ8TCT0 537 aa9.08□□□□□ -0.96
CDH12-207ENST00000521745 CCDC88BA6NC98 1476 aa9.08□□□□□ -0.96
CDH12-207ENST00000521745 BCAMP50895 628 aa9.07□□□□□ -0.96
CDH12-207ENST00000521745 FAM98CQ17RN3 349 aaKnown RBP9.07□□□□□ -0.96
CDH12-207ENST00000521745 ARHGEF1Q92888 912 aaKnown RBP9.07□□□□□ -0.96
CDH12-207ENST00000521745 CDCA7LQ96GN5 454 aa9.07□□□□□ -0.96
CDH12-207ENST00000521745 OSBPP22059 807 aa9.06□□□□□ -0.96
CDH12-207ENST00000521745 PRSS12P56730 875 aa9.06□□□□□ -0.96
CDH12-207ENST00000521745 SOWAHBA6NEL2 793 aa9.05□□□□□ -0.96
CDH12-207ENST00000521745 KCNV2Q8TDN2 545 aa9.05□□□□□ -0.96
CDH12-207ENST00000521745 TSKSQ9UJT2 592 aa9.05□□□□□ -0.96
CDH12-207ENST00000521745 PRIM1P49642 420 aaKnown RBP9.04□□□□□ -0.96
CDH12-207ENST00000521745 P3H3Q8IVL6 736 aa9.04□□□□□ -0.96
CDH12-207ENST00000521745 LRCH3Q96II8 777 aa9.04□□□□□ -0.96
CDH12-207ENST00000521745 PLCB2Q00722 1185 aa9.03□□□□□ -0.96
CDH12-207ENST00000521745 CDHR5Q9HBB8 845 aa9.03□□□□□ -0.96
CDH12-207ENST00000521745 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.03□□□□□ -0.96
CDH12-207ENST00000521745 NBPF26B4DH59 902 aa9.02□□□□□ -0.97
CDH12-207ENST00000521745 SMAPO00193 183 aa9.01□□□□□ -0.97
CDH12-207ENST00000521745 NYAP1Q6ZVC0 841 aa9.01□□□□□ -0.97
CDH12-207ENST00000521745 WBP1LQ9NX94 342 aa9□□□□□ -0.97
CDH12-207ENST00000521745 PNMA3Q9UL41 463 aa9□□□□□ -0.97
CDH12-207ENST00000521745 HPS5Q9UPZ3 1129 aa9□□□□□ -0.97
CDH12-207ENST00000521745 TSR3Q9UJK0 312 aaKnown RBP8.99□□□□□ -0.97
CDH12-207ENST00000521745 MLLT3P42568 568 aaPredicted RBP8.98□□□□□ -0.97
CDH12-207ENST00000521745 HDGFP51858 240 aaKnown RBP8.98□□□□□ -0.97
CDH12-207ENST00000521745 TATDN2Q93075 761 aa8.98□□□□□ -0.97
CDH12-207ENST00000521745 RBM27Q9P2N5 1060 aaKnown RBP8.98□□□□□ -0.97
CDH12-207ENST00000521745 PPP4CP60510 307 aa8.97□□□□□ -0.97
CDH12-207ENST00000521745 FAM198AQ9UFP1 575 aa8.97□□□□□ -0.97
CDH12-207ENST00000521745 IFFO2Q5TF58 517 aa8.96□□□□□ -0.98
CDH12-207ENST00000521745 NUDT18Q6ZVK8 323 aa8.96□□□□□ -0.98
CDH12-207ENST00000521745 SAMD7Q7Z3H4 446 aa8.96□□□□□ -0.98
CDH12-207ENST00000521745 RNF40O75150 1001 aa8.95□□□□□ -0.98
CDH12-207ENST00000521745 HAP1P54257 671 aaPredicted RBP8.95□□□□□ -0.98
CDH12-207ENST00000521745 PADI6Q6TGC4 694 aa8.95□□□□□ -0.98
CDH12-207ENST00000521745 NPDC1Q9NQX5 325 aaPredicted RBP8.93□□□□□ -0.98
CDH12-207ENST00000521745 NUTM2FA1L443 756 aa8.92□□□□□ -0.98
CDH12-207ENST00000521745 C3orf80F5H4A9 247 aa8.92□□□□□ -0.98
CDH12-207ENST00000521745 ITGBL1O95965 494 aaPredicted RBP8.92□□□□□ -0.98
CDH12-207ENST00000521745 CADPSQ9ULU8 1353 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms