RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 KIF21BO75037 1637 aa20.49■□□□□ 0.87
USP42-207ENST00000521713 FGD1P98174 961 aa20.49■□□□□ 0.87
USP42-207ENST00000521713 B4GALNT3Q6L9W6 998 aa20.49■□□□□ 0.87
USP42-207ENST00000521713 ANKRD50Q9ULJ7 1429 aa20.48■□□□□ 0.87
USP42-207ENST00000521713 COG3Q96JB2 828 aa20.48■□□□□ 0.87
USP42-207ENST00000521713 CGNL1Q0VF96 1302 aa20.47■□□□□ 0.87
USP42-207ENST00000521713 NCOA2Q15596 1464 aa20.46■□□□□ 0.87
USP42-207ENST00000521713 SYNJ1O43426 1573 aa20.46■□□□□ 0.87
USP42-207ENST00000521713 MSNP26038 577 aaKnown RBP20.46■□□□□ 0.87
USP42-207ENST00000521713 AFAP1Q8N556 730 aa20.45■□□□□ 0.86
USP42-207ENST00000521713 SNAPC4Q5SXM2 1469 aa20.45■□□□□ 0.86
USP42-207ENST00000521713 PTMSP20962 102 aa20.45■□□□□ 0.86
USP42-207ENST00000521713 PANK3Q9H999 370 aa20.45■□□□□ 0.86
USP42-207ENST00000521713 ZNF330Q9Y3S2 320 aaPredicted RBP20.45■□□□□ 0.86
USP42-207ENST00000521713 ZRSR1Q15695 479 aaKnown RBP20.45■□□□□ 0.86
USP42-207ENST00000521713 ARHGAP5Q13017 1502 aa20.45■□□□□ 0.86
USP42-207ENST00000521713 DNMBPQ6XZF7 1577 aa20.45■□□□□ 0.86
USP42-207ENST00000521713 MINK1Q8N4C8 1332 aaPredicted RBP20.44■□□□□ 0.86
USP42-207ENST00000521713 LTV1Q96GA3 475 aaPredicted RBP20.44■□□□□ 0.86
USP42-207ENST00000521713 RCAN3Q9UKA8 241 aa20.44■□□□□ 0.86
USP42-207ENST00000521713 EFCAB5A4FU69 1503 aa20.44■□□□□ 0.86
USP42-207ENST00000521713 CHAF1AQ13111 956 aaPredicted RBP20.44■□□□□ 0.86
USP42-207ENST00000521713 TOP2BQ02880 1626 aa20.43■□□□□ 0.86
USP42-207ENST00000521713 PDE3BQ13370 1112 aa20.43■□□□□ 0.86
USP42-207ENST00000521713 USP47Q96K76 1375 aa20.42■□□□□ 0.86
USP42-207ENST00000521713 PRXQ9BXM0 1461 aa20.41■□□□□ 0.86
USP42-207ENST00000521713 PLEKHH2Q8IVE3 1493 aa20.4■□□□□ 0.86
USP42-207ENST00000521713 MYBBP1AQ9BQG0 1328 aaKnown RBP20.4■□□□□ 0.86
USP42-207ENST00000521713 GOLGA6L6A8MZA4 724 aa20.4■□□□□ 0.86
USP42-207ENST00000521713 MCCP23508 829 aa20.4■□□□□ 0.86
USP42-207ENST00000521713 TCERG1O14776 1098 aaKnown RBP20.39■□□□□ 0.85
USP42-207ENST00000521713 HSP90AB1P08238 724 aaKnown RBP20.39■□□□□ 0.85
USP42-207ENST00000521713 LAMC3Q9Y6N6 1575 aa20.39■□□□□ 0.85
USP42-207ENST00000521713 NRDCO43847 1150 aa20.39■□□□□ 0.85
USP42-207ENST00000521713 TMX4Q9H1E5 349 aaPredicted RBP20.38■□□□□ 0.85
USP42-207ENST00000521713 RWDD1Q9H446 243 aaPredicted RBP20.38■□□□□ 0.85
USP42-207ENST00000521713 HSCBQ8IWL3 235 aa20.38■□□□□ 0.85
USP42-207ENST00000521713 ITPRIPQ8IWB1 547 aa20.37■□□□□ 0.85
USP42-207ENST00000521713 SMC4Q9NTJ3 1288 aa20.37■□□□□ 0.85
USP42-207ENST00000521713 CENPJQ9HC77 1338 aaPredicted RBP20.37■□□□□ 0.85
USP42-207ENST00000521713 AEBP2Q6ZN18 517 aaPredicted RBP20.36■□□□□ 0.85
USP42-207ENST00000521713 USP35Q9P2H5 1018 aa20.36■□□□□ 0.85
USP42-207ENST00000521713 TROQ12816 1431 aaPredicted RBP20.35■□□□□ 0.85
USP42-207ENST00000521713 EVA1CP58658 441 aa20.35■□□□□ 0.85
USP42-207ENST00000521713 BICRAQ9NZM4 1560 aa20.35■□□□□ 0.85
USP42-207ENST00000521713 ARAP1Q96P48 1450 aa20.34■□□□□ 0.85
USP42-207ENST00000521713 KIAA0586Q9BVV6 1533 aa20.34■□□□□ 0.85
USP42-207ENST00000521713 PSME1Q06323 249 aa20.34■□□□□ 0.85
USP42-207ENST00000521713 CCDC146Q8IYE0 955 aa20.34■□□□□ 0.85
USP42-207ENST00000521713 HMMRO75330 724 aa20.34■□□□□ 0.85
USP42-207ENST00000521713 IPO9Q96P70 1041 aaKnown RBP20.33■□□□□ 0.85
USP42-207ENST00000521713 C1orf141Q5JVX7 400 aa20.32■□□□□ 0.84
USP42-207ENST00000521713 NAP1L2Q9ULW6 460 aaPredicted RBP20.32■□□□□ 0.84
USP42-207ENST00000521713 ATF3P18847 181 aa20.31■□□□□ 0.84
USP42-207ENST00000521713 MIA2Q96PC5 1412 aa20.31■□□□□ 0.84
USP42-207ENST00000521713 DNAJC5BQ9UF47 199 aa20.31■□□□□ 0.84
USP42-207ENST00000521713 KIAA1211Q6ZU35 1233 aa20.3■□□□□ 0.84
USP42-207ENST00000521713 ABCA10Q8WWZ4 1543 aa20.3■□□□□ 0.84
USP42-207ENST00000521713 APBB1O00213 710 aa20.3■□□□□ 0.84
USP42-207ENST00000521713 TAF7LQ5H9L4 462 aa20.3■□□□□ 0.84
USP42-207ENST00000521713 PMFBP1Q8TBY8 1022 aa20.29■□□□□ 0.84
USP42-207ENST00000521713 RSPH6AQ9H0K4 717 aa20.29■□□□□ 0.84
USP42-207ENST00000521713 TEFQ10587 303 aa20.28■□□□□ 0.84
USP42-207ENST00000521713 EHBP1L1Q8N3D4 1523 aa20.27■□□□□ 0.84
USP42-207ENST00000521713 GORABQ5T7V8 394 aa20.27■□□□□ 0.84
USP42-207ENST00000521713 RRBP1Q9P2E9 1410 aaKnown RBP20.27■□□□□ 0.83
USP42-207ENST00000521713 GBP4Q96PP9 640 aa20.27■□□□□ 0.83
USP42-207ENST00000521713 NGEFQ8N5V2 710 aa20.26■□□□□ 0.83
USP42-207ENST00000521713 PRKRIP1Q9H875 184 aaPredicted RBP20.26■□□□□ 0.83
USP42-207ENST00000521713 SLC4A10Q6U841 1118 aa20.26■□□□□ 0.83
USP42-207ENST00000521713 CHMP3Q9Y3E7 222 aa20.26■□□□□ 0.83
USP42-207ENST00000521713 SCAPERQ9BY12 1400 aa20.26■□□□□ 0.83
USP42-207ENST00000521713 GPATCH3Q96I76 525 aa20.25■□□□□ 0.83
USP42-207ENST00000521713 HFM1A2PYH4 1435 aa20.25■□□□□ 0.83
USP42-207ENST00000521713 TXNDC2Q86VQ3 553 aa20.25■□□□□ 0.83
USP42-207ENST00000521713 THEMISQ8N1K5 641 aaPredicted RBP20.25■□□□□ 0.83
USP42-207ENST00000521713 DIAPH1O60610 1272 aaKnown RBP20.25■□□□□ 0.83
USP42-207ENST00000521713 GTF2E1P29083 439 aaPredicted RBP20.25■□□□□ 0.83
USP42-207ENST00000521713 C9orf84Q5VXU9 1444 aa20.24■□□□□ 0.83
USP42-207ENST00000521713 SLC52A1Q9NWF4 448 aa20.24■□□□□ 0.83
USP42-207ENST00000521713 HECW1Q76N89 1606 aa20.22■□□□□ 0.83
USP42-207ENST00000521713 TAOK2Q9UL54 1235 aa20.22■□□□□ 0.83
USP42-207ENST00000521713 PLCB2Q00722 1185 aa20.21■□□□□ 0.83
USP42-207ENST00000521713 POGZQ7Z3K3 1410 aa20.21■□□□□ 0.83
USP42-207ENST00000521713 RRP7AQ9Y3A4 280 aaKnown RBP20.2■□□□□ 0.82
USP42-207ENST00000521713 E9PSI1 815 aa20.2■□□□□ 0.82
USP42-207ENST00000521713 GOLGA6L3A6NEY3 463 aa20.19■□□□□ 0.82
USP42-207ENST00000521713 TTC5Q8N0Z6 440 aa20.19■□□□□ 0.82
USP42-207ENST00000521713 CLUAP1Q96AJ1 413 aa20.19■□□□□ 0.82
USP42-207ENST00000521713 GOLGA6L4A6NEF3 574 aa20.19■□□□□ 0.82
USP42-207ENST00000521713 KIAA2012Q0VF49 1180 aa20.18■□□□□ 0.82
USP42-207ENST00000521713 FANCIQ9NVI1 1328 aa20.18■□□□□ 0.82
USP42-207ENST00000521713 MAGI1Q96QZ7 1491 aaPredicted RBP20.18■□□□□ 0.82
USP42-207ENST00000521713 RAPGEF3O95398 923 aa20.17■□□□□ 0.82
USP42-207ENST00000521713 TMEM132EQ6IEE7 984 aa20.17■□□□□ 0.82
USP42-207ENST00000521713 ISY1Q9ULR0 285 aaKnown RBP20.17■□□□□ 0.82
USP42-207ENST00000521713 TPRNQ4KMQ1 711 aa20.16■□□□□ 0.82
USP42-207ENST00000521713 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.16■□□□□ 0.82
USP42-207ENST00000521713 CFAP70Q5T0N1 1121 aa20.15■□□□□ 0.82
USP42-207ENST00000521713 G3V3G9 751 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms