RNA–Protein interactions for RNA: ENST00000519802.5

PCM1-213, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-213ENST00000519802 FBXW7Q969H0 707 aa12.16□□□□□ -0.46
PCM1-213ENST00000519802 RABGEF1Q9UJ41 708 aa12.15□□□□□ -0.46
PCM1-213ENST00000519802 PROX2Q3B8N5 592 aa12.14□□□□□ -0.47
PCM1-213ENST00000519802 DPYSL4O14531 572 aa12.1□□□□□ -0.47
PCM1-213ENST00000519802 EPAS1Q99814 870 aa12.09□□□□□ -0.47
PCM1-213ENST00000519802 ANKK1Q8NFD2 765 aa12.08□□□□□ -0.48
PCM1-213ENST00000519802 C6orf132Q5T0Z8 1188 aa12.07□□□□□ -0.48
PCM1-213ENST00000519802 LAPTM4BQ86VI4 370 aa12.07□□□□□ -0.48
PCM1-213ENST00000519802 A0A0G2JS52 829 aa12.06□□□□□ -0.48
PCM1-213ENST00000519802 RGS20O76081 388 aa12.06□□□□□ -0.48
PCM1-213ENST00000519802 KIAA1468Q9P260 1216 aa12.06□□□□□ -0.48
PCM1-213ENST00000519802 BBXQ8WY36 941 aaPredicted RBP12.05□□□□□ -0.48
PCM1-213ENST00000519802 ONECUT3O60422 494 aaPredicted RBP12.04□□□□□ -0.48
PCM1-213ENST00000519802 BCAMP50895 628 aa12.03□□□□□ -0.48
PCM1-213ENST00000519802 SOWAHBA6NEL2 793 aa12.02□□□□□ -0.49
PCM1-213ENST00000519802 DDX12PQ92771 950 aa12.01□□□□□ -0.49
PCM1-213ENST00000519802 ZFRQ96KR1 1074 aaKnown RBP12.01□□□□□ -0.49
PCM1-213ENST00000519802 RBM33Q96EV2 1170 aaKnown RBP12□□□□□ -0.49
PCM1-213ENST00000519802 TRIM6-TRIM34B2RNG4 842 aa11.99□□□□□ -0.49
PCM1-213ENST00000519802 ITGBL1O95965 494 aaPredicted RBP11.99□□□□□ -0.49
PCM1-213ENST00000519802 SEPT9Q9UHD8 586 aaPredicted RBP11.99□□□□□ -0.49
PCM1-213ENST00000519802 PDIA6Q15084 440 aa11.96□□□□□ -0.49
PCM1-213ENST00000519802 NYAP1Q6ZVC0 841 aa11.96□□□□□ -0.49
PCM1-213ENST00000519802 FAM98CQ17RN3 349 aaKnown RBP11.95□□□□□ -0.5
PCM1-213ENST00000519802 WBP1LQ9NX94 342 aa11.95□□□□□ -0.5
PCM1-213ENST00000519802 EN1Q05925 392 aaPredicted RBP11.94□□□□□ -0.5
PCM1-213ENST00000519802 NBR1Q14596 966 aa11.94□□□□□ -0.5
PCM1-213ENST00000519802 TSR1Q2NL82 804 aaKnown RBP11.92□□□□□ -0.5
PCM1-213ENST00000519802 SPRYD3Q8NCJ5 442 aa11.92□□□□□ -0.5
PCM1-213ENST00000519802 SPDYE16A6NNV3 312 aaPredicted RBP11.91□□□□□ -0.5
PCM1-213ENST00000519802 MAP3K7O43318 606 aa11.91□□□□□ -0.5
PCM1-213ENST00000519802 IRX2Q9BZI1 471 aaPredicted RBP11.91□□□□□ -0.5
PCM1-213ENST00000519802 TSKSQ9UJT2 592 aa11.9□□□□□ -0.5
PCM1-213ENST00000519802 LRCH3Q96II8 777 aa11.89□□□□□ -0.51
PCM1-213ENST00000519802 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.89□□□□□ -0.51
PCM1-213ENST00000519802 PACS2Q86VP3 889 aa11.88□□□□□ -0.51
PCM1-213ENST00000519802 TSR3Q9UJK0 312 aaKnown RBP11.88□□□□□ -0.51
PCM1-213ENST00000519802 HPS5Q9UPZ3 1129 aa11.87□□□□□ -0.51
PCM1-213ENST00000519802 KCNC4Q03721 635 aa11.86□□□□□ -0.51
PCM1-213ENST00000519802 E2F4Q16254 413 aa11.86□□□□□ -0.51
PCM1-213ENST00000519802 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.86□□□□□ -0.51
PCM1-213ENST00000519802 ARIH1Q9Y4X5 557 aaPredicted RBP11.85□□□□□ -0.51
PCM1-213ENST00000519802 PRIM1P49642 420 aaKnown RBP11.83□□□□□ -0.52
PCM1-213ENST00000519802 CDCA7LQ96GN5 454 aa11.83□□□□□ -0.52
PCM1-213ENST00000519802 PRSS12P56730 875 aa11.82□□□□□ -0.52
PCM1-213ENST00000519802 FAM198AQ9UFP1 575 aa11.81□□□□□ -0.52
PCM1-213ENST00000519802 CERKQ8TCT0 537 aa11.8□□□□□ -0.52
PCM1-213ENST00000519802 GRXCR2A6NFK2 248 aa11.79□□□□□ -0.52
PCM1-213ENST00000519802 SMAPO00193 183 aa11.79□□□□□ -0.52
PCM1-213ENST00000519802 PPP4CP60510 307 aa11.78□□□□□ -0.52
PCM1-213ENST00000519802 WDR70Q9NW82 654 aa11.78□□□□□ -0.52
PCM1-213ENST00000519802 C3orf80F5H4A9 247 aa11.77□□□□□ -0.53
PCM1-213ENST00000519802 PAXIP1Q6ZW49 1069 aaPredicted RBP11.77□□□□□ -0.53
PCM1-213ENST00000519802 SAMD7Q7Z3H4 446 aa11.77□□□□□ -0.53
PCM1-213ENST00000519802 OSBPP22059 807 aa11.76□□□□□ -0.53
PCM1-213ENST00000519802 CFAP44Q96MT7 982 aa11.76□□□□□ -0.53
PCM1-213ENST00000519802 SLC24A1O60721 1099 aa11.75□□□□□ -0.53
PCM1-213ENST00000519802 TATDN2Q93075 761 aa11.75□□□□□ -0.53
PCM1-213ENST00000519802 NBPF26B4DH59 902 aa11.74□□□□□ -0.53
PCM1-213ENST00000519802 CDHR5Q9HBB8 845 aa11.74□□□□□ -0.53
PCM1-213ENST00000519802 PNMA3Q9UL41 463 aa11.73□□□□□ -0.53
PCM1-213ENST00000519802 TJAP1Q5JTD0 557 aa11.72□□□□□ -0.53
PCM1-213ENST00000519802 RBM27Q9P2N5 1060 aaKnown RBP11.71□□□□□ -0.53
PCM1-213ENST00000519802 NUDT18Q6ZVK8 323 aa11.69□□□□□ -0.54
PCM1-213ENST00000519802 MTRQ99707 1265 aa11.67□□□□□ -0.54
PCM1-213ENST00000519802 Q6ZNB5 142 aa11.66□□□□□ -0.54
PCM1-213ENST00000519802 TTC13Q8NBP0 860 aa11.66□□□□□ -0.54
PCM1-213ENST00000519802 IL21Q9HBE4 155 aa11.65□□□□□ -0.54
PCM1-213ENST00000519802 NPDC1Q9NQX5 325 aaPredicted RBP11.65□□□□□ -0.54
PCM1-213ENST00000519802 HDGFP51858 240 aaKnown RBP11.64□□□□□ -0.55
PCM1-213ENST00000519802 RNF40O75150 1001 aa11.63□□□□□ -0.55
PCM1-213ENST00000519802 APLP1P51693 650 aa11.62□□□□□ -0.55
PCM1-213ENST00000519802 PADI6Q6TGC4 694 aa11.62□□□□□ -0.55
PCM1-213ENST00000519802 ZNF516Q92618 1163 aa11.61□□□□□ -0.55
PCM1-213ENST00000519802 LAPTM4AQ15012 233 aa11.6□□□□□ -0.55
PCM1-213ENST00000519802 SWT1Q5T5J6 900 aaKnown RBP11.59□□□□□ -0.55
PCM1-213ENST00000519802 PPP1R18Q6NYC8 613 aa11.59□□□□□ -0.55
PCM1-213ENST00000519802 PRKD2Q9BZL6 878 aa11.58□□□□□ -0.56
PCM1-213ENST00000519802 NECTIN2Q92692 538 aa11.57□□□□□ -0.56
PCM1-213ENST00000519802 GFRA3O60609 400 aa11.56□□□□□ -0.56
PCM1-213ENST00000519802 SLF2Q8IX21 1173 aa11.56□□□□□ -0.56
PCM1-213ENST00000519802 EYA1Q99502 592 aa11.55□□□□□ -0.56
PCM1-213ENST00000519802 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.55□□□□□ -0.56
PCM1-213ENST00000519802 NKX2-3Q8TAU0 364 aa11.54□□□□□ -0.56
PCM1-213ENST00000519802 LCE2BO14633 110 aa11.53□□□□□ -0.56
PCM1-213ENST00000519802 MLLT3P42568 568 aaPredicted RBP11.53□□□□□ -0.56
PCM1-213ENST00000519802 ARHGEF1Q92888 912 aaKnown RBP11.53□□□□□ -0.56
PCM1-213ENST00000519802 V9GY48 417 aaPredicted RBP11.53□□□□□ -0.56
PCM1-213ENST00000519802 COPS2P61201 443 aa11.51□□□□□ -0.57
PCM1-213ENST00000519802 TSHZ2Q9NRE2 1034 aa11.5□□□□□ -0.57
PCM1-213ENST00000519802 SLC4A3P48751 1232 aa11.49□□□□□ -0.57
PCM1-213ENST00000519802 PLCB2Q00722 1185 aa11.49□□□□□ -0.57
PCM1-213ENST00000519802 KCNV2Q8TDN2 545 aa11.49□□□□□ -0.57
PCM1-213ENST00000519802 NRG2O14511 850 aaPredicted RBP11.48□□□□□ -0.57
PCM1-213ENST00000519802 TRAF7Q6Q0C0 670 aa11.48□□□□□ -0.57
PCM1-213ENST00000519802 PTGDRQ13258 359 aa11.47□□□□□ -0.57
PCM1-213ENST00000519802 ZPR1O75312 459 aa11.46□□□□□ -0.57
PCM1-213ENST00000519802 GGCXP38435 758 aa11.46□□□□□ -0.57
PCM1-213ENST00000519802 PRR14Q9BWN1 585 aa11.46□□□□□ -0.57
PCM1-213ENST00000519802 DNAJB2P25686 324 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms