RNA–Protein interactions for RNA: ENST00000519589.1

KCNQ3-203, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

TSL 2

Gene KCNQ3, Length 3,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-203ENST00000519589 PRDM4Q9UKN5 801 aa11.29□□□□□ -0.6
KCNQ3-203ENST00000519589 MAP3K1Q13233 1512 aa11.29□□□□□ -0.6
KCNQ3-203ENST00000519589 FANCAO15360 1455 aa11.29□□□□□ -0.6
KCNQ3-203ENST00000519589 CCDC18Q5T9S5 1454 aa11.29□□□□□ -0.6
KCNQ3-203ENST00000519589 MAGI3Q5TCQ9 1506 aa11.28□□□□□ -0.6
KCNQ3-203ENST00000519589 TROQ12816 1431 aaPredicted RBP11.28□□□□□ -0.6
KCNQ3-203ENST00000519589 FGD6Q6ZV73 1430 aa11.28□□□□□ -0.6
KCNQ3-203ENST00000519589 SHROOM2Q13796 1616 aa11.28□□□□□ -0.6
KCNQ3-203ENST00000519589 FGD1P98174 961 aa11.28□□□□□ -0.6
KCNQ3-203ENST00000519589 RBM10P98175 930 aaKnown RBP11.27□□□□□ -0.61
KCNQ3-203ENST00000519589 HECW1Q76N89 1606 aa11.27□□□□□ -0.61
KCNQ3-203ENST00000519589 TEX14Q8IWB6 1497 aa11.27□□□□□ -0.61
KCNQ3-203ENST00000519589 TCERG1O14776 1098 aaKnown RBP11.27□□□□□ -0.61
KCNQ3-203ENST00000519589 FAM9BQ8IZU0 186 aa11.26□□□□□ -0.61
KCNQ3-203ENST00000519589 ADGRL1O94910 1474 aa11.26□□□□□ -0.61
KCNQ3-203ENST00000519589 RAPGEF6Q8TEU7 1601 aa11.26□□□□□ -0.61
KCNQ3-203ENST00000519589 MYOM3Q5VTT5 1437 aa11.26□□□□□ -0.61
KCNQ3-203ENST00000519589 COL17A1Q9UMD9 1497 aaPredicted RBP11.26□□□□□ -0.61
KCNQ3-203ENST00000519589 MS4A1P11836 297 aa11.25□□□□□ -0.61
KCNQ3-203ENST00000519589 HSP90AA2PQ14568 343 aaPredicted RBP11.25□□□□□ -0.61
KCNQ3-203ENST00000519589 KDM6BO15054 1643 aa11.25□□□□□ -0.61
KCNQ3-203ENST00000519589 DENND4BO75064 1496 aaPredicted RBP11.24□□□□□ -0.61
KCNQ3-203ENST00000519589 KDM4FA0A1W2PPD8 638 aa11.24□□□□□ -0.61
KCNQ3-203ENST00000519589 CENPJQ9HC77 1338 aaPredicted RBP11.24□□□□□ -0.61
KCNQ3-203ENST00000519589 PRKRIP1Q9H875 184 aaPredicted RBP11.24□□□□□ -0.61
KCNQ3-203ENST00000519589 ZCCHC11Q5TAX3 1644 aaKnown RBP11.24□□□□□ -0.61
KCNQ3-203ENST00000519589 VIRMAQ69YN4 1812 aaKnown RBP11.23□□□□□ -0.61
KCNQ3-203ENST00000519589 NPM2Q86SE8 214 aaKnown RBP11.23□□□□□ -0.61
KCNQ3-203ENST00000519589 NUDCQ9Y266 331 aa11.23□□□□□ -0.61
KCNQ3-203ENST00000519589 UHRF1BP1LA0JNW5 1464 aa11.22□□□□□ -0.61
KCNQ3-203ENST00000519589 CFAP43Q8NDM7 1665 aa11.22□□□□□ -0.61
KCNQ3-203ENST00000519589 NCOA1Q15788 1441 aa11.22□□□□□ -0.61
KCNQ3-203ENST00000519589 EIF4G2P78344 907 aaKnown RBP eCLIP11.21□□□□□ -0.61
KCNQ3-203ENST00000519589 NUTM2DQ5VT03 806 aaPredicted RBP11.21□□□□□ -0.61
KCNQ3-203ENST00000519589 SLC4A1APQ9BWU0 796 aaKnown RBP11.21□□□□□ -0.61
KCNQ3-203ENST00000519589 ABCA8O94911 1581 aa11.21□□□□□ -0.61
KCNQ3-203ENST00000519589 PTPRKQ15262 1439 aa11.2□□□□□ -0.62
KCNQ3-203ENST00000519589 FRAT2O75474 233 aaPredicted RBP11.2□□□□□ -0.62
KCNQ3-203ENST00000519589 CLCN1P35523 988 aa11.2□□□□□ -0.62
KCNQ3-203ENST00000519589 MRS2Q9HD23 443 aa11.2□□□□□ -0.62
KCNQ3-203ENST00000519589 EHBP1L1Q8N3D4 1523 aa11.19□□□□□ -0.62
KCNQ3-203ENST00000519589 DIP2BQ9P265 1576 aa11.19□□□□□ -0.62
KCNQ3-203ENST00000519589 YEATS2Q9ULM3 1422 aa11.19□□□□□ -0.62
KCNQ3-203ENST00000519589 LRRIQ1Q96JM4 1722 aa11.18□□□□□ -0.62
KCNQ3-203ENST00000519589 DDRGK1Q96HY6 314 aa11.18□□□□□ -0.62
KCNQ3-203ENST00000519589 KIF14Q15058 1648 aa11.18□□□□□ -0.62
KCNQ3-203ENST00000519589 CALD1Q05682 793 aaKnown RBP11.17□□□□□ -0.62
KCNQ3-203ENST00000519589 FBXO31Q5XUX0 539 aaPredicted RBP11.17□□□□□ -0.62
KCNQ3-203ENST00000519589 PLCH2O75038 1416 aa11.17□□□□□ -0.62
KCNQ3-203ENST00000519589 TRAPPC8Q9Y2L5 1435 aa11.17□□□□□ -0.62
KCNQ3-203ENST00000519589 SUPT6HQ7KZ85 1726 aaKnown RBP11.17□□□□□ -0.62
KCNQ3-203ENST00000519589 SENP3-EIF4A1A0A087X0R7 540 aa11.17□□□□□ -0.62
KCNQ3-203ENST00000519589 HSP90AA1P07900 732 aaKnown RBP11.17□□□□□ -0.62
KCNQ3-203ENST00000519589 HSPA5P11021 654 aaKnown RBP11.16□□□□□ -0.62
KCNQ3-203ENST00000519589 A0A0U1RQG5 324 aaPredicted RBP11.15□□□□□ -0.62
KCNQ3-203ENST00000519589 GPATCH8Q9UKJ3 1502 aaKnown RBP11.15□□□□□ -0.62
KCNQ3-203ENST00000519589 SLC4A3P48751 1232 aa11.14□□□□□ -0.63
KCNQ3-203ENST00000519589 CCDC7Q96M83 1385 aa11.14□□□□□ -0.63
KCNQ3-203ENST00000519589 RGL3Q3MIN7 710 aa11.14□□□□□ -0.63
KCNQ3-203ENST00000519589 KDM2AQ9Y2K7 1162 aa11.14□□□□□ -0.63
KCNQ3-203ENST00000519589 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.14□□□□□ -0.63
KCNQ3-203ENST00000519589 PTPN23Q9H3S7 1636 aa11.14□□□□□ -0.63
KCNQ3-203ENST00000519589 POGZQ7Z3K3 1410 aa11.13□□□□□ -0.63
KCNQ3-203ENST00000519589 C14orf37Q86TY3 774 aa11.13□□□□□ -0.63
KCNQ3-203ENST00000519589 POGKQ9P215 609 aa11.13□□□□□ -0.63
KCNQ3-203ENST00000519589 DHX29Q7Z478 1369 aaKnown RBP11.12□□□□□ -0.63
KCNQ3-203ENST00000519589 MPHOSPH9Q99550 1183 aa11.12□□□□□ -0.63
KCNQ3-203ENST00000519589 EXOC6Q8TAG9 804 aa11.12□□□□□ -0.63
KCNQ3-203ENST00000519589 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.12□□□□□ -0.63
KCNQ3-203ENST00000519589 FSD2A1L4K1 749 aa11.11□□□□□ -0.63
KCNQ3-203ENST00000519589 PKD2Q13563 968 aa11.11□□□□□ -0.63
KCNQ3-203ENST00000519589 SPATA31E1Q6ZUB1 1445 aa11.11□□□□□ -0.63
KCNQ3-203ENST00000519589 PDE4CQ08493 712 aa11.11□□□□□ -0.63
KCNQ3-203ENST00000519589 CAMSAP2Q08AD1 1489 aa11.1□□□□□ -0.63
KCNQ3-203ENST00000519589 ABCC5O15440 1437 aa11.1□□□□□ -0.63
KCNQ3-203ENST00000519589 NUP155O75694 1391 aa11.1□□□□□ -0.63
KCNQ3-203ENST00000519589 RRP1P56182 461 aaKnown RBP11.1□□□□□ -0.63
KCNQ3-203ENST00000519589 NAP1L5Q96NT1 182 aaPredicted RBP11.1□□□□□ -0.63
KCNQ3-203ENST00000519589 PDCL3Q9H2J4 239 aa11.1□□□□□ -0.63
KCNQ3-203ENST00000519589 DAPK1P53355 1430 aa11.09□□□□□ -0.63
KCNQ3-203ENST00000519589 PNNQ9H307 717 aaKnown RBP11.09□□□□□ -0.63
KCNQ3-203ENST00000519589 RBM33Q96EV2 1170 aaKnown RBP11.09□□□□□ -0.63
KCNQ3-203ENST00000519589 ANKRD30AQ9BXX3 1397 aa11.09□□□□□ -0.63
KCNQ3-203ENST00000519589 TTC37Q6PGP7 1564 aa11.08□□□□□ -0.63
KCNQ3-203ENST00000519589 SKAP1Q86WV1 359 aa11.08□□□□□ -0.64
KCNQ3-203ENST00000519589 L3MBTL2Q969R5 705 aa11.08□□□□□ -0.64
KCNQ3-203ENST00000519589 XRCC6P12956 609 aaKnown RBP eCLIP11.08□□□□□ -0.64
KCNQ3-203ENST00000519589 RSPH4AQ5TD94 716 aa11.08□□□□□ -0.64
KCNQ3-203ENST00000519589 LRPPRCP42704 1394 aaKnown RBP11.08□□□□□ -0.64
KCNQ3-203ENST00000519589 KIF15Q9NS87 1388 aa11.08□□□□□ -0.64
KCNQ3-203ENST00000519589 C8orf34Q49A92 452 aa11.07□□□□□ -0.64
KCNQ3-203ENST00000519589 NAIPQ13075 1403 aa11.07□□□□□ -0.64
KCNQ3-203ENST00000519589 ERBB4Q15303 1308 aa11.07□□□□□ -0.64
KCNQ3-203ENST00000519589 MIA2Q96PC5 1412 aa11.07□□□□□ -0.64
KCNQ3-203ENST00000519589 HFM1A2PYH4 1435 aa11.07□□□□□ -0.64
KCNQ3-203ENST00000519589 RGS3P49796 1198 aa11.07□□□□□ -0.64
KCNQ3-203ENST00000519589 KDM2BQ8NHM5 1336 aa11.06□□□□□ -0.64
KCNQ3-203ENST00000519589 BCORL1Q5H9F3 1711 aa11.06□□□□□ -0.64
KCNQ3-203ENST00000519589 SYCP2Q9BX26 1530 aa11.06□□□□□ -0.64
KCNQ3-203ENST00000519589 C9orf84Q5VXU9 1444 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms