RNA–Protein interactions for RNA: ENST00000519560.5

SLIT3-206, Transcript of slit guidance ligand 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLIT3, Length 9,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-206ENST00000519560 SMC4Q9NTJ3 1288 aa17■□□□□ 0.31
SLIT3-206ENST00000519560 SAFB2Q14151 953 aaKnown RBP eCLIP16.99■□□□□ 0.31
SLIT3-206ENST00000519560 FOXD4L1Q9NU39 408 aa16.99■□□□□ 0.31
SLIT3-206ENST00000519560 SKOR2Q2VWA4 1001 aaPredicted RBP16.98■□□□□ 0.31
SLIT3-206ENST00000519560 CHMP4CQ96CF2 233 aa16.98■□□□□ 0.31
SLIT3-206ENST00000519560 BECN2A8MW95 431 aa16.97■□□□□ 0.31
SLIT3-206ENST00000519560 PHLDB1Q86UU1 1377 aa16.97■□□□□ 0.31
SLIT3-206ENST00000519560 IPO7O95373 1038 aaKnown RBP16.97■□□□□ 0.31
SLIT3-206ENST00000519560 NOM1Q5C9Z4 860 aaKnown RBP16.97■□□□□ 0.31
SLIT3-206ENST00000519560 CCDC88BA6NC98 1476 aa16.96■□□□□ 0.31
SLIT3-206ENST00000519560 G3V3G9 751 aa16.95■□□□□ 0.3
SLIT3-206ENST00000519560 DCAF8Q5TAQ9 597 aa16.95■□□□□ 0.3
SLIT3-206ENST00000519560 ANO8Q9HCE9 1232 aaPredicted RBP16.95■□□□□ 0.3
SLIT3-206ENST00000519560 WIZO95785 1651 aa16.95■□□□□ 0.3
SLIT3-206ENST00000519560 MROH2BQ7Z745 1585 aa16.95■□□□□ 0.3
SLIT3-206ENST00000519560 PAK3O75914 559 aaPredicted RBP16.95■□□□□ 0.3
SLIT3-206ENST00000519560 TOMM22Q9NS69 142 aa16.95■□□□□ 0.3
SLIT3-206ENST00000519560 FOXD4L5Q5VV16 416 aaPredicted RBP16.95■□□□□ 0.3
SLIT3-206ENST00000519560 FOXD4L4Q8WXT5 416 aaPredicted RBP16.95■□□□□ 0.3
SLIT3-206ENST00000519560 TCEAL9Q9UHQ7 104 aa16.95■□□□□ 0.3
SLIT3-206ENST00000519560 ABCC8Q09428 1581 aa16.94■□□□□ 0.3
SLIT3-206ENST00000519560 CARMIL1Q5VZK9 1371 aa16.94■□□□□ 0.3
SLIT3-206ENST00000519560 VSIG10Q8N0Z9 540 aa16.94■□□□□ 0.3
SLIT3-206ENST00000519560 CSB-PGBD3P0DP91 1061 aa16.94■□□□□ 0.3
SLIT3-206ENST00000519560 ZNF592Q92610 1267 aa16.93■□□□□ 0.3
SLIT3-206ENST00000519560 SOGA1O94964 1423 aa16.93■□□□□ 0.3
SLIT3-206ENST00000519560 ANKRD20A12PQ8NF67 263 aa16.93■□□□□ 0.3
SLIT3-206ENST00000519560 CENPJQ9HC77 1338 aaPredicted RBP16.92■□□□□ 0.3
SLIT3-206ENST00000519560 FBXO3Q9UK99 471 aa16.92■□□□□ 0.3
SLIT3-206ENST00000519560 AKAP17AQ02040 695 aaKnown RBP16.92■□□□□ 0.3
SLIT3-206ENST00000519560 CECR2Q9BXF3 1484 aa16.92■□□□□ 0.3
SLIT3-206ENST00000519560 AK7Q96M32 723 aa16.92■□□□□ 0.3
SLIT3-206ENST00000519560 CUX2O14529 1486 aa16.91■□□□□ 0.3
SLIT3-206ENST00000519560 FAM184AQ8NB25 1140 aa16.91■□□□□ 0.3
SLIT3-206ENST00000519560 RUFY1Q96T51 708 aa16.91■□□□□ 0.3
SLIT3-206ENST00000519560 LMOD3Q0VAK6 560 aa16.9■□□□□ 0.3
SLIT3-206ENST00000519560 ERCC6Q03468 1493 aa16.9■□□□□ 0.3
SLIT3-206ENST00000519560 DDX49Q9Y6V7 483 aaKnown RBP16.9■□□□□ 0.3
SLIT3-206ENST00000519560 SLC4A10Q6U841 1118 aa16.9■□□□□ 0.3
SLIT3-206ENST00000519560 HOOK1Q9UJC3 728 aaKnown RBP16.9■□□□□ 0.3
SLIT3-206ENST00000519560 HSPA5P11021 654 aaKnown RBP16.89■□□□□ 0.29
SLIT3-206ENST00000519560 FRAT2O75474 233 aaPredicted RBP16.89■□□□□ 0.29
SLIT3-206ENST00000519560 SMARCA4P51532 1647 aa16.89■□□□□ 0.29
SLIT3-206ENST00000519560 CDR1P51861 262 aa16.89■□□□□ 0.29
SLIT3-206ENST00000519560 STK26Q9P289 416 aa16.89■□□□□ 0.29
SLIT3-206ENST00000519560 GSE1Q14687 1217 aa16.88■□□□□ 0.29
SLIT3-206ENST00000519560 MCTP1Q6DN14 999 aa16.87■□□□□ 0.29
SLIT3-206ENST00000519560 PCMTD1Q96MG8 357 aaPredicted RBP16.87■□□□□ 0.29
SLIT3-206ENST00000519560 RAB3GAP2Q9H2M9 1393 aa16.87■□□□□ 0.29
SLIT3-206ENST00000519560 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.87■□□□□ 0.29
SLIT3-206ENST00000519560 PDE3BQ13370 1112 aa16.87■□□□□ 0.29
SLIT3-206ENST00000519560 HOMER1Q86YM7 354 aa16.87■□□□□ 0.29
SLIT3-206ENST00000519560 ACBD3Q9H3P7 528 aa16.86■□□□□ 0.29
SLIT3-206ENST00000519560 KRI1Q8N9T8 703 aaKnown RBP16.86■□□□□ 0.29
SLIT3-206ENST00000519560 LRRFIP1Q32MZ4 808 aaKnown RBP16.85■□□□□ 0.29
SLIT3-206ENST00000519560 ARGLU1Q9NWB6 273 aaPredicted RBP16.85■□□□□ 0.29
SLIT3-206ENST00000519560 TERF2IPQ9NYB0 399 aa16.84■□□□□ 0.29
SLIT3-206ENST00000519560 MAP7D2Q96T17 732 aa16.83■□□□□ 0.29
SLIT3-206ENST00000519560 SYNE3Q6ZMZ3 975 aa16.83■□□□□ 0.28
SLIT3-206ENST00000519560 FAM13BQ9NYF5 915 aa16.83■□□□□ 0.28
SLIT3-206ENST00000519560 HSP90B2PQ58FF3 399 aa16.82■□□□□ 0.28
SLIT3-206ENST00000519560 WWC1Q8IX03 1113 aa16.82■□□□□ 0.28
SLIT3-206ENST00000519560 TRIM29Q14134 588 aa16.82■□□□□ 0.28
SLIT3-206ENST00000519560 DCTN1Q14203 1278 aa16.81■□□□□ 0.28
SLIT3-206ENST00000519560 CENPQQ7L2Z9 268 aaPredicted RBP16.81■□□□□ 0.28
SLIT3-206ENST00000519560 CCDC47Q96A33 483 aaKnown RBP16.81■□□□□ 0.28
SLIT3-206ENST00000519560 CCDC191Q8NCU4 936 aa16.81■□□□□ 0.28
SLIT3-206ENST00000519560 CWC15Q9P013 229 aaKnown RBP16.81■□□□□ 0.28
SLIT3-206ENST00000519560 CLUAP1Q96AJ1 413 aa16.81■□□□□ 0.28
SLIT3-206ENST00000519560 CCDC18Q5T9S5 1454 aa16.81■□□□□ 0.28
SLIT3-206ENST00000519560 FAM161AQ3B820 660 aa16.81■□□□□ 0.28
SLIT3-206ENST00000519560 RILPL2Q969X0 211 aa16.81■□□□□ 0.28
SLIT3-206ENST00000519560 FOXD4L6Q3SYB3 417 aaPredicted RBP16.81■□□□□ 0.28
SLIT3-206ENST00000519560 FOXD4L3Q6VB84 417 aaPredicted RBP16.81■□□□□ 0.28
SLIT3-206ENST00000519560 AMOTL1Q8IY63 956 aa16.81■□□□□ 0.28
SLIT3-206ENST00000519560 KAT6BQ8WYB5 2073 aa16.8■□□□□ 0.28
SLIT3-206ENST00000519560 TSHZ2Q9NRE2 1034 aa16.8■□□□□ 0.28
SLIT3-206ENST00000519560 DIAPH3Q9NSV4 1193 aa16.8■□□□□ 0.28
SLIT3-206ENST00000519560 REC8O95072 547 aa16.8■□□□□ 0.28
SLIT3-206ENST00000519560 MLECQ14165 292 aa16.79■□□□□ 0.28
SLIT3-206ENST00000519560 GTF2E1P29083 439 aaPredicted RBP16.79■□□□□ 0.28
SLIT3-206ENST00000519560 CNKSR2Q8WXI2 1034 aa16.78■□□□□ 0.28
SLIT3-206ENST00000519560 CPLX2Q6PUV4 134 aaKnown RBP16.78■□□□□ 0.28
SLIT3-206ENST00000519560 TRIM34Q9BYJ4 488 aa16.78■□□□□ 0.28
SLIT3-206ENST00000519560 NAP1L1P55209 391 aaKnown RBP16.77■□□□□ 0.28
SLIT3-206ENST00000519560 PKD2Q13563 968 aa16.77■□□□□ 0.28
SLIT3-206ENST00000519560 CT47A1Q5JQC4 288 aaPredicted RBP16.77■□□□□ 0.28
SLIT3-206ENST00000519560 KIF21BO75037 1637 aa16.77■□□□□ 0.28
SLIT3-206ENST00000519560 CUX1P39880 1505 aa16.77■□□□□ 0.27
SLIT3-206ENST00000519560 CCDC146Q8IYE0 955 aa16.77■□□□□ 0.27
SLIT3-206ENST00000519560 RAPGEF2Q9Y4G8 1499 aa16.76■□□□□ 0.27
SLIT3-206ENST00000519560 KIF15Q9NS87 1388 aa16.76■□□□□ 0.27
SLIT3-206ENST00000519560 RUFY2Q8WXA3 655 aa16.76■□□□□ 0.27
SLIT3-206ENST00000519560 NOL10Q9BSC4 688 aaKnown RBP16.76■□□□□ 0.27
SLIT3-206ENST00000519560 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.76■□□□□ 0.27
SLIT3-206ENST00000519560 ODF2Q5BJF6 829 aa16.76■□□□□ 0.27
SLIT3-206ENST00000519560 CGNL1Q0VF96 1302 aa16.76■□□□□ 0.27
SLIT3-206ENST00000519560 MNS1Q8NEH6 495 aa16.76■□□□□ 0.27
SLIT3-206ENST00000519560 ZKSCAN1P17029 563 aaPredicted RBP16.75■□□□□ 0.27
SLIT3-206ENST00000519560 NLRP13Q86W25 1043 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms