RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 NPDC1Q9NQX5 325 aaPredicted RBP14.19□□□□□ -0.14
PTPN12-213ENST00000519553 ERBB3P21860 1342 aa14.18□□□□□ -0.14
PTPN12-213ENST00000519553 VARS2Q5ST30 1063 aaKnown RBP14.18□□□□□ -0.14
PTPN12-213ENST00000519553 C6orf132Q5T0Z8 1188 aa14.18□□□□□ -0.14
PTPN12-213ENST00000519553 BCL2L12Q9HB09 334 aa14.18□□□□□ -0.14
PTPN12-213ENST00000519553 FCHSD2O94868 740 aa14.16□□□□□ -0.14
PTPN12-213ENST00000519553 BARGINQ6ZT62 677 aa14.15□□□□□ -0.14
PTPN12-213ENST00000519553 FAM205CA6NFA0 338 aa14.14□□□□□ -0.15
PTPN12-213ENST00000519553 POTEB3A0JP26 581 aa14.13□□□□□ -0.15
PTPN12-213ENST00000519553 HIC1Q14526 733 aa14.13□□□□□ -0.15
PTPN12-213ENST00000519553 POTEBQ6S5H4 581 aa14.13□□□□□ -0.15
PTPN12-213ENST00000519553 GNPATO15228 680 aa14.11□□□□□ -0.15
PTPN12-213ENST00000519553 COL9A1P20849 921 aa14.1□□□□□ -0.15
PTPN12-213ENST00000519553 FECHP22830 423 aa14.1□□□□□ -0.15
PTPN12-213ENST00000519553 POTEEQ6S8J3 1075 aa14.1□□□□□ -0.15
PTPN12-213ENST00000519553 HS3ST6Q96QI5 342 aa14.1□□□□□ -0.15
PTPN12-213ENST00000519553 PTPREP23469 700 aa14.09□□□□□ -0.15
PTPN12-213ENST00000519553 CERKQ8TCT0 537 aa14.08□□□□□ -0.16
PTPN12-213ENST00000519553 SLC24A3Q9HC58 644 aa14.07□□□□□ -0.16
PTPN12-213ENST00000519553 PPP1R3GB7ZBB8 358 aa14.06□□□□□ -0.16
PTPN12-213ENST00000519553 ZNF687Q8N1G0 1237 aa14.06□□□□□ -0.16
PTPN12-213ENST00000519553 KCNK17Q96T54 332 aa14.06□□□□□ -0.16
PTPN12-213ENST00000519553 MAP2K5Q13163 448 aa14.04□□□□□ -0.16
PTPN12-213ENST00000519553 PSEN2P49810 448 aa14.03□□□□□ -0.16
PTPN12-213ENST00000519553 RBM27Q9P2N5 1060 aaKnown RBP14.03□□□□□ -0.16
PTPN12-213ENST00000519553 PADI6Q6TGC4 694 aa14.02□□□□□ -0.17
PTPN12-213ENST00000519553 TTC13Q8NBP0 860 aa14.02□□□□□ -0.17
PTPN12-213ENST00000519553 AXIN2Q9Y2T1 843 aa14.01□□□□□ -0.17
PTPN12-213ENST00000519553 ARHGAP33O14559 1287 aa14□□□□□ -0.17
PTPN12-213ENST00000519553 PBX2P40425 430 aa14□□□□□ -0.17
PTPN12-213ENST00000519553 PRSS12P56730 875 aa14□□□□□ -0.17
PTPN12-213ENST00000519553 CDCA7LQ96GN5 454 aa14□□□□□ -0.17
PTPN12-213ENST00000519553 MINK1Q8N4C8 1332 aaPredicted RBP13.99□□□□□ -0.17
PTPN12-213ENST00000519553 KRI1Q8N9T8 703 aaKnown RBP13.99□□□□□ -0.17
PTPN12-213ENST00000519553 FAM198AQ9UFP1 575 aa13.99□□□□□ -0.17
PTPN12-213ENST00000519553 IRF6O14896 467 aa13.98□□□□□ -0.17
PTPN12-213ENST00000519553 DMRTA1Q5VZB9 504 aa13.98□□□□□ -0.17
PTPN12-213ENST00000519553 CCDC102AQ96A19 550 aa13.98□□□□□ -0.17
PTPN12-213ENST00000519553 KCNH8Q96L42 1107 aa13.97□□□□□ -0.17
PTPN12-213ENST00000519553 ZBED2Q9BTP6 218 aa13.97□□□□□ -0.17
PTPN12-213ENST00000519553 PROX2Q3B8N5 592 aa13.96□□□□□ -0.17
PTPN12-213ENST00000519553 TSKSQ9UJT2 592 aa13.96□□□□□ -0.17
PTPN12-213ENST00000519553 AK7Q96M32 723 aa13.95□□□□□ -0.18
PTPN12-213ENST00000519553 TRIM6-TRIM34B2RNG4 842 aa13.94□□□□□ -0.18
PTPN12-213ENST00000519553 FAM161AQ3B820 660 aa13.92□□□□□ -0.18
PTPN12-213ENST00000519553 SLC4A5Q9BY07 1137 aa13.92□□□□□ -0.18
PTPN12-213ENST00000519553 ADGRG1Q9Y653 693 aa13.92□□□□□ -0.18
PTPN12-213ENST00000519553 C3orf80F5H4A9 247 aa13.9□□□□□ -0.18
PTPN12-213ENST00000519553 TRIM66O15016 1216 aa13.9□□□□□ -0.18
PTPN12-213ENST00000519553 POTEMA6NI47 508 aa13.89□□□□□ -0.19
PTPN12-213ENST00000519553 ONECUT3O60422 494 aaPredicted RBP13.88□□□□□ -0.19
PTPN12-213ENST00000519553 PHOX2BQ99453 314 aa13.88□□□□□ -0.19
PTPN12-213ENST00000519553 POTEGQ6S5H5 508 aa13.87□□□□□ -0.19
PTPN12-213ENST00000519553 METTL3Q86U44 580 aaKnown RBP13.87□□□□□ -0.19
PTPN12-213ENST00000519553 VPS9D1Q9Y2B5 631 aa13.87□□□□□ -0.19
PTPN12-213ENST00000519553 LSM11P83369 360 aaKnown RBP eCLIP13.86□□□□□ -0.19
PTPN12-213ENST00000519553 PXYLP1Q8TE99 480 aa13.85□□□□□ -0.19
PTPN12-213ENST00000519553 AMHR2Q16671 573 aa13.84□□□□□ -0.19
PTPN12-213ENST00000519553 KRTAP3-3Q9BYR6 98 aa13.84□□□□□ -0.19
PTPN12-213ENST00000519553 KRTAP3-2Q9BYR7 98 aa13.84□□□□□ -0.19
PTPN12-213ENST00000519553 KIAA1468Q9P260 1216 aa13.84□□□□□ -0.19
PTPN12-213ENST00000519553 NBPF26B4DH59 902 aa13.83□□□□□ -0.2
PTPN12-213ENST00000519553 OATP04181 439 aa13.83□□□□□ -0.2
PTPN12-213ENST00000519553 BRPF1P55201 1214 aaPredicted RBP13.83□□□□□ -0.2
PTPN12-213ENST00000519553 PACS2Q86VP3 889 aa13.83□□□□□ -0.2
PTPN12-213ENST00000519553 TATDN2Q93075 761 aa13.83□□□□□ -0.2
PTPN12-213ENST00000519553 EYA1Q99502 592 aa13.83□□□□□ -0.2
PTPN12-213ENST00000519553 RABGEF1Q9UJ41 708 aa13.83□□□□□ -0.2
PTPN12-213ENST00000519553 TK2O00142 265 aa13.82□□□□□ -0.2
PTPN12-213ENST00000519553 PDE4DQ08499 809 aa13.82□□□□□ -0.2
PTPN12-213ENST00000519553 NUDT18Q6ZVK8 323 aa13.82□□□□□ -0.2
PTPN12-213ENST00000519553 PNMA3Q9UL41 463 aa13.81□□□□□ -0.2
PTPN12-213ENST00000519553 ADGRD1Q6QNK2 874 aa13.8□□□□□ -0.2
PTPN12-213ENST00000519553 RBM46Q8TBY0 533 aaKnown RBP13.8□□□□□ -0.2
PTPN12-213ENST00000519553 SMAPO00193 183 aa13.79□□□□□ -0.2
PTPN12-213ENST00000519553 BHMG1C9JSJ3 638 aaPredicted RBP13.78□□□□□ -0.2
PTPN12-213ENST00000519553 PARP9Q8IXQ6 854 aa13.77□□□□□ -0.21
PTPN12-213ENST00000519553 NLRP7Q8WX94 980 aa13.77□□□□□ -0.21
PTPN12-213ENST00000519553 HRO43593 1189 aa13.76□□□□□ -0.21
PTPN12-213ENST00000519553 GPBP1L1Q9HC44 474 aaPredicted RBP13.76□□□□□ -0.21
PTPN12-213ENST00000519553 SEPT9Q9UHD8 586 aaPredicted RBP13.76□□□□□ -0.21
PTPN12-213ENST00000519553 NEUROD2Q15784 382 aa13.75□□□□□ -0.21
PTPN12-213ENST00000519553 CDAN1Q8IWY9 1227 aa13.75□□□□□ -0.21
PTPN12-213ENST00000519553 TMUB1Q9BVT8 246 aa13.75□□□□□ -0.21
PTPN12-213ENST00000519553 REPIN1Q9BWE0 567 aaKnown RBP13.75□□□□□ -0.21
PTPN12-213ENST00000519553 RCCD1A6NED2 376 aa13.74□□□□□ -0.21
PTPN12-213ENST00000519553 ANKRD13DQ6ZTN6 518 aa13.74□□□□□ -0.21
PTPN12-213ENST00000519553 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.73□□□□□ -0.21
PTPN12-213ENST00000519553 MDM2Q00987 491 aaPredicted RBP13.73□□□□□ -0.21
PTPN12-213ENST00000519553 TTLL12Q14166 644 aaPredicted RBP13.72□□□□□ -0.21
PTPN12-213ENST00000519553 NBPF3Q9H094 633 aa13.71□□□□□ -0.21
PTPN12-213ENST00000519553 DNAJB2P25686 324 aa13.7□□□□□ -0.22
PTPN12-213ENST00000519553 FAM98CQ17RN3 349 aaKnown RBP13.7□□□□□ -0.22
PTPN12-213ENST00000519553 KDM4CQ9H3R0 1056 aa13.7□□□□□ -0.22
PTPN12-213ENST00000519553 GPCPD1Q9NPB8 672 aa13.7□□□□□ -0.22
PTPN12-213ENST00000519553 CLCN1P35523 988 aa13.69□□□□□ -0.22
PTPN12-213ENST00000519553 GIGYF2Q6Y7W6 1299 aaKnown RBP13.69□□□□□ -0.22
PTPN12-213ENST00000519553 TMEM134Q9H6X4 195 aa13.69□□□□□ -0.22
PTPN12-213ENST00000519553 LAPTM4BQ86VI4 370 aa13.68□□□□□ -0.22
PTPN12-213ENST00000519553 MRPL50Q8N5N7 158 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms