RNA–Protein interactions for RNA: ENST00000519382.1

TRAPPC2-207, Transcript of trafficking protein particle complex 2, humanhuman

TSL 2

Gene TRAPPC2, Length 1,411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-207ENST00000519382 EPAS1Q99814 870 aa12.21□□□□□ -0.45
TRAPPC2-207ENST00000519382 GRXCR2A6NFK2 248 aa12.2□□□□□ -0.46
TRAPPC2-207ENST00000519382 COL9A1P20849 921 aa12.2□□□□□ -0.46
TRAPPC2-207ENST00000519382 NBR1Q14596 966 aa12.2□□□□□ -0.46
TRAPPC2-207ENST00000519382 MLLT3P42568 568 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC2-207ENST00000519382 C6orf132Q5T0Z8 1188 aa12.18□□□□□ -0.46
TRAPPC2-207ENST00000519382 HRO43593 1189 aa12.17□□□□□ -0.46
TRAPPC2-207ENST00000519382 OSBPP22059 807 aa12.17□□□□□ -0.46
TRAPPC2-207ENST00000519382 TSR1Q2NL82 804 aaKnown RBP12.17□□□□□ -0.46
TRAPPC2-207ENST00000519382 VSIG10Q8N0Z9 540 aa12.17□□□□□ -0.46
TRAPPC2-207ENST00000519382 ZBED2Q9BTP6 218 aa12.17□□□□□ -0.46
TRAPPC2-207ENST00000519382 VPS9D1Q9Y2B5 631 aa12.17□□□□□ -0.46
TRAPPC2-207ENST00000519382 TK2O00142 265 aa12.16□□□□□ -0.46
TRAPPC2-207ENST00000519382 EN1Q05925 392 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC2-207ENST00000519382 P3H3Q8IVL6 736 aa12.16□□□□□ -0.46
TRAPPC2-207ENST00000519382 KCNH8Q96L42 1107 aa12.14□□□□□ -0.47
TRAPPC2-207ENST00000519382 PPP1R3GB7ZBB8 358 aa12.13□□□□□ -0.47
TRAPPC2-207ENST00000519382 MYT1LQ9UL68 1186 aa12.13□□□□□ -0.47
TRAPPC2-207ENST00000519382 SEMA3EO15041 775 aa12.12□□□□□ -0.47
TRAPPC2-207ENST00000519382 PROX2Q3B8N5 592 aa12.12□□□□□ -0.47
TRAPPC2-207ENST00000519382 SLC4A5Q9BY07 1137 aa12.12□□□□□ -0.47
TRAPPC2-207ENST00000519382 MAP3K7O43318 606 aa12.11□□□□□ -0.47
TRAPPC2-207ENST00000519382 CDHR5Q9HBB8 845 aa12.1□□□□□ -0.47
TRAPPC2-207ENST00000519382 RNF166Q96A37 237 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC2-207ENST00000519382 BHMG1C9JSJ3 638 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC2-207ENST00000519382 NPDC1Q9NQX5 325 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC2-207ENST00000519382 TESPA1A2RU30 521 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC2-207ENST00000519382 FAM198AQ9UFP1 575 aa12.02□□□□□ -0.49
TRAPPC2-207ENST00000519382 KIAA1468Q9P260 1216 aa12.01□□□□□ -0.49
TRAPPC2-207ENST00000519382 RABGEF1Q9UJ41 708 aa12.01□□□□□ -0.49
TRAPPC2-207ENST00000519382 TSKSQ9UJT2 592 aa12.01□□□□□ -0.49
TRAPPC2-207ENST00000519382 TRIM6-TRIM34B2RNG4 842 aa12□□□□□ -0.49
TRAPPC2-207ENST00000519382 C3orf80F5H4A9 247 aa11.99□□□□□ -0.49
TRAPPC2-207ENST00000519382 PRSS12P56730 875 aa11.97□□□□□ -0.49
TRAPPC2-207ENST00000519382 CDCA7LQ96GN5 454 aa11.97□□□□□ -0.49
TRAPPC2-207ENST00000519382 MRPL50Q8N5N7 158 aaKnown RBP11.96□□□□□ -0.49
TRAPPC2-207ENST00000519382 ONECUT3O60422 494 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC2-207ENST00000519382 RBM26Q5T8P6 1007 aaKnown RBP11.95□□□□□ -0.5
TRAPPC2-207ENST00000519382 KCTD12Q96CX2 325 aaKnown RBP11.95□□□□□ -0.5
TRAPPC2-207ENST00000519382 STAC3Q96MF2 364 aa11.95□□□□□ -0.5
TRAPPC2-207ENST00000519382 SEPT9Q9UHD8 586 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC2-207ENST00000519382 NBPF3Q9H094 633 aa11.94□□□□□ -0.5
TRAPPC2-207ENST00000519382 CERKQ8TCT0 537 aa11.93□□□□□ -0.5
TRAPPC2-207ENST00000519382 SMAPO00193 183 aa11.91□□□□□ -0.5
TRAPPC2-207ENST00000519382 PTGDRQ13258 359 aa11.91□□□□□ -0.5
TRAPPC2-207ENST00000519382 PADI6Q6TGC4 694 aa11.91□□□□□ -0.5
TRAPPC2-207ENST00000519382 TTC13Q8NBP0 860 aa11.91□□□□□ -0.5
TRAPPC2-207ENST00000519382 NUTM2FA1L443 756 aa11.9□□□□□ -0.5
TRAPPC2-207ENST00000519382 PACS2Q86VP3 889 aa11.88□□□□□ -0.51
TRAPPC2-207ENST00000519382 WNT2BQ93097 391 aa11.88□□□□□ -0.51
TRAPPC2-207ENST00000519382 RBM27Q9P2N5 1060 aaKnown RBP11.87□□□□□ -0.51
TRAPPC2-207ENST00000519382 GOLGA8CPA6NN73 597 aa11.86□□□□□ -0.51
TRAPPC2-207ENST00000519382 THSD4Q6ZMP0 1018 aa11.86□□□□□ -0.51
TRAPPC2-207ENST00000519382 LAPTM4BQ86VI4 370 aa11.86□□□□□ -0.51
TRAPPC2-207ENST00000519382 ZFRQ96KR1 1074 aaKnown RBP11.86□□□□□ -0.51
TRAPPC2-207ENST00000519382 TATDN2Q93075 761 aa11.86□□□□□ -0.51
TRAPPC2-207ENST00000519382 GPR37O15354 613 aa11.85□□□□□ -0.51
TRAPPC2-207ENST00000519382 FAM98CQ17RN3 349 aaKnown RBP11.85□□□□□ -0.51
TRAPPC2-207ENST00000519382 PNMA3Q9UL41 463 aa11.85□□□□□ -0.51
TRAPPC2-207ENST00000519382 PTPN5P54829 565 aa11.84□□□□□ -0.51
TRAPPC2-207ENST00000519382 SMYD5Q6GMV2 418 aa11.84□□□□□ -0.51
TRAPPC2-207ENST00000519382 NUDT18Q6ZVK8 323 aa11.84□□□□□ -0.51
TRAPPC2-207ENST00000519382 BCAMP50895 628 aa11.83□□□□□ -0.52
TRAPPC2-207ENST00000519382 HCSTQ9UBK5 93 aa11.83□□□□□ -0.52
TRAPPC2-207ENST00000519382 FCHSD2O94868 740 aa11.81□□□□□ -0.52
TRAPPC2-207ENST00000519382 FAM161AQ3B820 660 aa11.81□□□□□ -0.52
TRAPPC2-207ENST00000519382 NBPF26B4DH59 902 aa11.8□□□□□ -0.52
TRAPPC2-207ENST00000519382 ANKK1Q8NFD2 765 aa11.8□□□□□ -0.52
TRAPPC2-207ENST00000519382 SOWAHBA6NEL2 793 aa11.79□□□□□ -0.52
TRAPPC2-207ENST00000519382 FECHP22830 423 aa11.79□□□□□ -0.52
TRAPPC2-207ENST00000519382 EYA1Q99502 592 aa11.78□□□□□ -0.52
TRAPPC2-207ENST00000519382 SAMD7Q7Z3H4 446 aa11.77□□□□□ -0.53
TRAPPC2-207ENST00000519382 ADGRG1Q9Y653 693 aa11.77□□□□□ -0.53
TRAPPC2-207ENST00000519382 CCDC180Q9P1Z9 1646 aa11.76□□□□□ -0.53
TRAPPC2-207ENST00000519382 HIC1Q14526 733 aa11.75□□□□□ -0.53
TRAPPC2-207ENST00000519382 GPIHBP1Q8IV16 184 aa11.74□□□□□ -0.53
TRAPPC2-207ENST00000519382 WBP1LQ9NX94 342 aa11.74□□□□□ -0.53
TRAPPC2-207ENST00000519382 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC2-207ENST00000519382 GNPATO15228 680 aa11.73□□□□□ -0.53
TRAPPC2-207ENST00000519382 LRCH3Q96II8 777 aa11.73□□□□□ -0.53
TRAPPC2-207ENST00000519382 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.72□□□□□ -0.53
TRAPPC2-207ENST00000519382 SLC24A1O60721 1099 aa11.71□□□□□ -0.53
TRAPPC2-207ENST00000519382 HPS5Q9UPZ3 1129 aa11.7□□□□□ -0.54
TRAPPC2-207ENST00000519382 SWT1Q5T5J6 900 aaKnown RBP11.69□□□□□ -0.54
TRAPPC2-207ENST00000519382 TSR3Q9UJK0 312 aaKnown RBP11.68□□□□□ -0.54
TRAPPC2-207ENST00000519382 RBM46Q8TBY0 533 aaKnown RBP11.67□□□□□ -0.54
TRAPPC2-207ENST00000519382 RCCD1A6NED2 376 aa11.66□□□□□ -0.54
TRAPPC2-207ENST00000519382 LMOD2Q6P5Q4 547 aa11.66□□□□□ -0.54
TRAPPC2-207ENST00000519382 PXYLP1Q8TE99 480 aa11.66□□□□□ -0.54
TRAPPC2-207ENST00000519382 PLA2G2EQ9NZK7 142 aa11.66□□□□□ -0.54
TRAPPC2-207ENST00000519382 TULP1O00294 542 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC2-207ENST00000519382 METTL3Q86U44 580 aaKnown RBP11.65□□□□□ -0.54
TRAPPC2-207ENST00000519382 PHOX2BQ99453 314 aa11.64□□□□□ -0.55
TRAPPC2-207ENST00000519382 DNAJB2P25686 324 aa11.63□□□□□ -0.55
TRAPPC2-207ENST00000519382 PPP4CP60510 307 aa11.63□□□□□ -0.55
TRAPPC2-207ENST00000519382 TMEM134Q9H6X4 195 aa11.63□□□□□ -0.55
TRAPPC2-207ENST00000519382 RNF40O75150 1001 aa11.62□□□□□ -0.55
TRAPPC2-207ENST00000519382 NLRP7Q8WX94 980 aa11.62□□□□□ -0.55
TRAPPC2-207ENST00000519382 OATP04181 439 aa11.6□□□□□ -0.55
TRAPPC2-207ENST00000519382 HDGFP51858 240 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms