RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 KRTAP3-3Q9BYR6 98 aa9.32□□□□□ -0.92
SKP1-205ENST00000519054 KRTAP3-2Q9BYR7 98 aa9.32□□□□□ -0.92
SKP1-205ENST00000519054 PTPREP23469 700 aa9.31□□□□□ -0.92
SKP1-205ENST00000519054 KCNH8Q96L42 1107 aa9.31□□□□□ -0.92
SKP1-205ENST00000519054 TSR1Q2NL82 804 aaKnown RBP9.3□□□□□ -0.92
SKP1-205ENST00000519054 C6orf132Q5T0Z8 1188 aa9.3□□□□□ -0.92
SKP1-205ENST00000519054 PLSCR2Q9NRY7 297 aa9.3□□□□□ -0.92
SKP1-205ENST00000519054 PCDH10Q9P2E7 1040 aa9.3□□□□□ -0.92
SKP1-205ENST00000519054 DMRTA1Q5VZB9 504 aa9.29□□□□□ -0.92
SKP1-205ENST00000519054 SMYD5Q6GMV2 418 aa9.29□□□□□ -0.92
SKP1-205ENST00000519054 LSM11P83369 360 aaKnown RBP eCLIP9.28□□□□□ -0.92
SKP1-205ENST00000519054 COL9A1P20849 921 aa9.27□□□□□ -0.93
SKP1-205ENST00000519054 RBM26Q5T8P6 1007 aaKnown RBP9.27□□□□□ -0.93
SKP1-205ENST00000519054 ANKRD13DQ6ZTN6 518 aa9.27□□□□□ -0.93
SKP1-205ENST00000519054 CDHR5Q9HBB8 845 aa9.26□□□□□ -0.93
SKP1-205ENST00000519054 PPP1R3GB7ZBB8 358 aa9.25□□□□□ -0.93
SKP1-205ENST00000519054 NUTM2FA1L443 756 aa9.24□□□□□ -0.93
SKP1-205ENST00000519054 TULP1O00294 542 aaPredicted RBP9.24□□□□□ -0.93
SKP1-205ENST00000519054 PROX2Q3B8N5 592 aa9.21□□□□□ -0.94
SKP1-205ENST00000519054 ADGRD1Q6QNK2 874 aa9.21□□□□□ -0.94
SKP1-205ENST00000519054 BCANQ96GW7 911 aa9.21□□□□□ -0.94
SKP1-205ENST00000519054 ZBED2Q9BTP6 218 aa9.21□□□□□ -0.94
SKP1-205ENST00000519054 VPS9D1Q9Y2B5 631 aa9.2□□□□□ -0.94
SKP1-205ENST00000519054 TK2O00142 265 aa9.19□□□□□ -0.94
SKP1-205ENST00000519054 CERKQ8TCT0 537 aa9.18□□□□□ -0.94
SKP1-205ENST00000519054 SLC4A5Q9BY07 1137 aa9.18□□□□□ -0.94
SKP1-205ENST00000519054 NPDC1Q9NQX5 325 aaPredicted RBP9.18□□□□□ -0.94
SKP1-205ENST00000519054 PTGDRQ13258 359 aa9.17□□□□□ -0.94
SKP1-205ENST00000519054 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.17□□□□□ -0.94
SKP1-205ENST00000519054 GPIHBP1Q8IV16 184 aa9.17□□□□□ -0.94
SKP1-205ENST00000519054 PRSS12P56730 875 aa9.16□□□□□ -0.94
SKP1-205ENST00000519054 LMOD2Q6P5Q4 547 aa9.16□□□□□ -0.94
SKP1-205ENST00000519054 CDCA7LQ96GN5 454 aa9.16□□□□□ -0.94
SKP1-205ENST00000519054 TRIM6-TRIM34B2RNG4 842 aa9.15□□□□□ -0.94
SKP1-205ENST00000519054 FCHSD2O94868 740 aa9.15□□□□□ -0.94
SKP1-205ENST00000519054 SPNS2Q8IVW8 549 aa9.15□□□□□ -0.94
SKP1-205ENST00000519054 HRO43593 1189 aa9.14□□□□□ -0.95
SKP1-205ENST00000519054 PADI6Q6TGC4 694 aa9.14□□□□□ -0.95
SKP1-205ENST00000519054 KIAA1468Q9P260 1216 aa9.14□□□□□ -0.95
SKP1-205ENST00000519054 TSKSQ9UJT2 592 aa9.14□□□□□ -0.95
SKP1-205ENST00000519054 FAM198AQ9UFP1 575 aa9.13□□□□□ -0.95
SKP1-205ENST00000519054 RABGEF1Q9UJ41 708 aa9.13□□□□□ -0.95
SKP1-205ENST00000519054 GPR37O15354 613 aa9.12□□□□□ -0.95
SKP1-205ENST00000519054 STAC3Q96MF2 364 aa9.12□□□□□ -0.95
SKP1-205ENST00000519054 BHMG1C9JSJ3 638 aaPredicted RBP9.11□□□□□ -0.95
SKP1-205ENST00000519054 PACS2Q86VP3 889 aa9.11□□□□□ -0.95
SKP1-205ENST00000519054 RBM27Q9P2N5 1060 aaKnown RBP9.11□□□□□ -0.95
SKP1-205ENST00000519054 ONECUT3O60422 494 aaPredicted RBP9.1□□□□□ -0.95
SKP1-205ENST00000519054 HIC1Q14526 733 aa9.1□□□□□ -0.95
SKP1-205ENST00000519054 NBPF3Q9H094 633 aa9.1□□□□□ -0.95
SKP1-205ENST00000519054 C3orf80F5H4A9 247 aa9.09□□□□□ -0.95
SKP1-205ENST00000519054 GNPATO15228 680 aa9.09□□□□□ -0.95
SKP1-205ENST00000519054 FECHP22830 423 aa9.09□□□□□ -0.95
SKP1-205ENST00000519054 MRPL50Q8N5N7 158 aaKnown RBP9.09□□□□□ -0.95
SKP1-205ENST00000519054 TTC13Q8NBP0 860 aa9.09□□□□□ -0.95
SKP1-205ENST00000519054 SEPT9Q9UHD8 586 aaPredicted RBP9.09□□□□□ -0.95
SKP1-205ENST00000519054 MYT1LQ9UL68 1186 aa9.09□□□□□ -0.95
SKP1-205ENST00000519054 SMAPO00193 183 aa9.08□□□□□ -0.96
SKP1-205ENST00000519054 NUDT18Q6ZVK8 323 aa9.07□□□□□ -0.96
SKP1-205ENST00000519054 TATDN2Q93075 761 aa9.07□□□□□ -0.96
SKP1-205ENST00000519054 PNMA3Q9UL41 463 aa9.07□□□□□ -0.96
SKP1-205ENST00000519054 NBPF26B4DH59 902 aa9.06□□□□□ -0.96
SKP1-205ENST00000519054 MMRN1Q13201 1228 aa9.06□□□□□ -0.96
SKP1-205ENST00000519054 FAM161AQ3B820 660 aa9.06□□□□□ -0.96
SKP1-205ENST00000519054 GOLGA8CPA6NN73 597 aa9.05□□□□□ -0.96
SKP1-205ENST00000519054 ZC3H15Q8WU90 426 aaKnown RBP9.05□□□□□ -0.96
SKP1-205ENST00000519054 FAM98CQ17RN3 349 aaKnown RBP9.03□□□□□ -0.96
SKP1-205ENST00000519054 LAPTM4BQ86VI4 370 aa9.03□□□□□ -0.96
SKP1-205ENST00000519054 RNF166Q96A37 237 aaPredicted RBP9.03□□□□□ -0.96
SKP1-205ENST00000519054 ADGRG1Q9Y653 693 aa9.03□□□□□ -0.96
SKP1-205ENST00000519054 KCTD12Q96CX2 325 aaKnown RBP9.02□□□□□ -0.97
SKP1-205ENST00000519054 WNT2BQ93097 391 aa9.01□□□□□ -0.97
SKP1-205ENST00000519054 ZFRQ96KR1 1074 aaKnown RBP9.01□□□□□ -0.97
SKP1-205ENST00000519054 RBM46Q8TBY0 533 aaKnown RBP9□□□□□ -0.97
SKP1-205ENST00000519054 EYA1Q99502 592 aa9□□□□□ -0.97
SKP1-205ENST00000519054 ZMYND10O75800 440 aa8.99□□□□□ -0.97
SKP1-205ENST00000519054 MAP2K5Q13163 448 aa8.99□□□□□ -0.97
SKP1-205ENST00000519054 ANKK1Q8NFD2 765 aa8.98□□□□□ -0.97
SKP1-205ENST00000519054 OATP04181 439 aa8.97□□□□□ -0.97
SKP1-205ENST00000519054 BARGINQ6ZT62 677 aa8.97□□□□□ -0.97
SKP1-205ENST00000519054 METTL3Q86U44 580 aaKnown RBP8.97□□□□□ -0.97
SKP1-205ENST00000519054 KRI1Q8N9T8 703 aaKnown RBP8.97□□□□□ -0.97
SKP1-205ENST00000519054 PXYLP1Q8TE99 480 aa8.97□□□□□ -0.97
SKP1-205ENST00000519054 IRF6O14896 467 aa8.96□□□□□ -0.98
SKP1-205ENST00000519054 BCAMP50895 628 aa8.96□□□□□ -0.98
SKP1-205ENST00000519054 SAMD7Q7Z3H4 446 aa8.96□□□□□ -0.98
SKP1-205ENST00000519054 MINK1Q8N4C8 1332 aaPredicted RBP8.96□□□□□ -0.98
SKP1-205ENST00000519054 RCCD1A6NED2 376 aa8.95□□□□□ -0.98
SKP1-205ENST00000519054 THSD4Q6ZMP0 1018 aa8.95□□□□□ -0.98
SKP1-205ENST00000519054 CCDC102AQ96A19 550 aa8.95□□□□□ -0.98
SKP1-205ENST00000519054 LRCH3Q96II8 777 aa8.95□□□□□ -0.98
SKP1-205ENST00000519054 DNAJB2P25686 324 aa8.94□□□□□ -0.98
SKP1-205ENST00000519054 PTPN5P54829 565 aa8.94□□□□□ -0.98
SKP1-205ENST00000519054 SWT1Q5T5J6 900 aaKnown RBP8.94□□□□□ -0.98
SKP1-205ENST00000519054 NLRP7Q8WX94 980 aa8.94□□□□□ -0.98
SKP1-205ENST00000519054 PHOX2BQ99453 314 aa8.94□□□□□ -0.98
SKP1-205ENST00000519054 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.94□□□□□ -0.98
SKP1-205ENST00000519054 SOWAHBA6NEL2 793 aa8.93□□□□□ -0.98
SKP1-205ENST00000519054 RNF40O75150 1001 aa8.93□□□□□ -0.98
SKP1-205ENST00000519054 HDGFP51858 240 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms