RNA–Protein interactions for RNA: ENST00000517790.1

PVT1-205, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 599 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-205ENST00000517790 MAPK8IP2Q13387 824 aaPredicted RBP8.32□□□□□ -1.08
PVT1-205ENST00000517790 CCDC9Q9Y3X0 531 aaKnown RBP8.32□□□□□ -1.08
PVT1-205ENST00000517790 MYO5CQ9NQX4 1742 aa8.32□□□□□ -1.08
PVT1-205ENST00000517790 KDM5CP41229 1560 aa8.31□□□□□ -1.08
PVT1-205ENST00000517790 EFCAB2Q5VUJ9 269 aa8.31□□□□□ -1.08
PVT1-205ENST00000517790 ESF1Q9H501 851 aaKnown RBP8.31□□□□□ -1.08
PVT1-205ENST00000517790 ZNF518AQ6AHZ1 1483 aa8.31□□□□□ -1.08
PVT1-205ENST00000517790 SPOCK2Q92563 424 aa8.3□□□□□ -1.08
PVT1-205ENST00000517790 SUPT6HQ7KZ85 1726 aaKnown RBP8.29□□□□□ -1.08
PVT1-205ENST00000517790 REREQ9P2R6 1566 aa8.29□□□□□ -1.08
PVT1-205ENST00000517790 KIF14Q15058 1648 aa8.29□□□□□ -1.08
PVT1-205ENST00000517790 RGS17Q9UGC6 210 aaPredicted RBP8.28□□□□□ -1.08
PVT1-205ENST00000517790 ALKQ9UM73 1620 aa8.28□□□□□ -1.08
PVT1-205ENST00000517790 AGLP35573 1532 aa8.28□□□□□ -1.08
PVT1-205ENST00000517790 TCOF1Q13428 1488 aaKnown RBP8.27□□□□□ -1.09
PVT1-205ENST00000517790 TOM1O60784 492 aa8.27□□□□□ -1.09
PVT1-205ENST00000517790 CHGAP10645 457 aaKnown RBP8.27□□□□□ -1.09
PVT1-205ENST00000517790 HOXD11P31277 338 aaPredicted RBP8.27□□□□□ -1.09
PVT1-205ENST00000517790 ZMYND15Q9H091 742 aa8.27□□□□□ -1.09
PVT1-205ENST00000517790 MYO3AQ8NEV4 1616 aa8.27□□□□□ -1.09
PVT1-205ENST00000517790 ARHGAP5Q13017 1502 aa8.27□□□□□ -1.09
PVT1-205ENST00000517790 NPATQ14207 1427 aa8.27□□□□□ -1.09
PVT1-205ENST00000517790 ZMYM3Q14202 1370 aa8.26□□□□□ -1.09
PVT1-205ENST00000517790 LOC105371045A0A1W2PR82 267 aa8.26□□□□□ -1.09
PVT1-205ENST00000517790 RSPH6AQ9H0K4 717 aa8.26□□□□□ -1.09
PVT1-205ENST00000517790 ZNF142P52746 1687 aaPredicted RBP8.26□□□□□ -1.09
PVT1-205ENST00000517790 CNTLNQ9NXG0 1405 aa8.26□□□□□ -1.09
PVT1-205ENST00000517790 CEP170BQ9Y4F5 1589 aaPredicted RBP8.26□□□□□ -1.09
PVT1-205ENST00000517790 PLA2R1Q13018 1463 aa8.26□□□□□ -1.09
PVT1-205ENST00000517790 MLH3Q9UHC1 1453 aa8.26□□□□□ -1.09
PVT1-205ENST00000517790 KIDINS220Q9ULH0 1771 aa8.25□□□□□ -1.09
PVT1-205ENST00000517790 MROH2AA6NES4 1674 aa8.25□□□□□ -1.09
PVT1-205ENST00000517790 ATP1B4Q9UN42 357 aaPredicted RBP8.25□□□□□ -1.09
PVT1-205ENST00000517790 CLTCQ00610 1675 aaKnown RBP8.24□□□□□ -1.09
PVT1-205ENST00000517790 CDC42BPBQ9Y5S2 1711 aa8.24□□□□□ -1.09
PVT1-205ENST00000517790 EIF5BO60841 1220 aaKnown RBP8.24□□□□□ -1.09
PVT1-205ENST00000517790 ZBTB7CA1YPR0 619 aa8.23□□□□□ -1.09
PVT1-205ENST00000517790 SHANK2Q9UPX8 1470 aa8.23□□□□□ -1.09
PVT1-205ENST00000517790 PTPRKQ15262 1439 aa8.22□□□□□ -1.09
PVT1-205ENST00000517790 ITSN2Q9NZM3 1697 aa8.22□□□□□ -1.09
PVT1-205ENST00000517790 POTEAQ6S8J7 498 aa8.22□□□□□ -1.09
PVT1-205ENST00000517790 CPS1P31327 1500 aa8.22□□□□□ -1.09
PVT1-205ENST00000517790 NEURL4Q96JN8 1562 aa8.22□□□□□ -1.09
PVT1-205ENST00000517790 SETD1AO15047 1707 aaKnown RBP8.21□□□□□ -1.09
PVT1-205ENST00000517790 POLR1AO95602 1720 aaPredicted RBP8.21□□□□□ -1.09
PVT1-205ENST00000517790 ABCC1P33527 1531 aa8.21□□□□□ -1.1
PVT1-205ENST00000517790 DNMT1P26358 1616 aaKnown RBP8.21□□□□□ -1.1
PVT1-205ENST00000517790 VWDEQ8N2E2 1590 aa8.2□□□□□ -1.1
PVT1-205ENST00000517790 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.2□□□□□ -1.1
PVT1-205ENST00000517790 NEUROD2Q15784 382 aa8.19□□□□□ -1.1
PVT1-205ENST00000517790 LMOD2Q6P5Q4 547 aa8.19□□□□□ -1.1
PVT1-205ENST00000517790 LRRIQ1Q96JM4 1722 aa8.19□□□□□ -1.1
PVT1-205ENST00000517790 STRCP1A6NGW2 1772 aa8.19□□□□□ -1.1
PVT1-205ENST00000517790 TROQ12816 1431 aaPredicted RBP8.19□□□□□ -1.1
PVT1-205ENST00000517790 PREX2Q70Z35 1606 aa8.18□□□□□ -1.1
PVT1-205ENST00000517790 A2ML1A8K2U0 1454 aa8.18□□□□□ -1.1
PVT1-205ENST00000517790 SAMD9LQ8IVG5 1584 aa8.18□□□□□ -1.1
PVT1-205ENST00000517790 GGT6Q6P531 493 aa8.17□□□□□ -1.1
PVT1-205ENST00000517790 HS6ST3Q8IZP7 471 aa8.17□□□□□ -1.1
PVT1-205ENST00000517790 FBXO31Q5XUX0 539 aaPredicted RBP8.16□□□□□ -1.1
PVT1-205ENST00000517790 CDK11AQ9UQ88 783 aaPredicted RBP8.16□□□□□ -1.1
PVT1-205ENST00000517790 CDC42BPAQ5VT25 1732 aa8.15□□□□□ -1.1
PVT1-205ENST00000517790 LRRC7Q96NW7 1537 aa8.15□□□□□ -1.1
PVT1-205ENST00000517790 CLIP1P30622 1438 aa8.15□□□□□ -1.1
PVT1-205ENST00000517790 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.15□□□□□ -1.1
PVT1-205ENST00000517790 SPAG9O60271 1321 aaKnown RBP8.15□□□□□ -1.1
PVT1-205ENST00000517790 PDIA4P13667 645 aaKnown RBP8.15□□□□□ -1.1
PVT1-205ENST00000517790 ZNF777Q9ULD5 760 aaPredicted RBP8.15□□□□□ -1.1
PVT1-205ENST00000517790 PLXNC1O60486 1568 aa8.14□□□□□ -1.11
PVT1-205ENST00000517790 SYCP2Q9BX26 1530 aa8.14□□□□□ -1.11
PVT1-205ENST00000517790 HNRNPMP52272 730 aaKnown RBP eCLIP8.14□□□□□ -1.116e-7■■■□□ 17.4
PVT1-205ENST00000517790 ARID3AQ99856 593 aa8.14□□□□□ -1.11
PVT1-205ENST00000517790 A2MP01023 1474 aa8.13□□□□□ -1.11
PVT1-205ENST00000517790 NPHP4O75161 1426 aaPredicted RBP8.13□□□□□ -1.11
PVT1-205ENST00000517790 ANKLE2Q86XL3 938 aa8.13□□□□□ -1.11
PVT1-205ENST00000517790 RNF17Q9BXT8 1623 aaKnown RBP8.13□□□□□ -1.11
PVT1-205ENST00000517790 ATP7AQ04656 1500 aa8.13□□□□□ -1.11
PVT1-205ENST00000517790 TNRQ92752 1358 aa8.12□□□□□ -1.11
PVT1-205ENST00000517790 SAMD1Q6SPF0 538 aaPredicted RBP8.12□□□□□ -1.11
PVT1-205ENST00000517790 C1orf115Q9H7X2 142 aa8.12□□□□□ -1.11
PVT1-205ENST00000517790 INO80Q9ULG1 1556 aaPredicted RBP8.12□□□□□ -1.11
PVT1-205ENST00000517790 FMN1Q68DA7 1419 aa8.12□□□□□ -1.11
PVT1-205ENST00000517790 IQGAP1P46940 1657 aa8.11□□□□□ -1.11
PVT1-205ENST00000517790 XIRP1Q702N8 1843 aaKnown RBP8.11□□□□□ -1.11
PVT1-205ENST00000517790 ARHGAP35Q9NRY4 1499 aa8.11□□□□□ -1.11
PVT1-205ENST00000517790 NECTIN2Q92692 538 aa8.1□□□□□ -1.11
PVT1-205ENST00000517790 MED14O60244 1454 aa8.1□□□□□ -1.11
PVT1-205ENST00000517790 DEPDC5O75140 1603 aa8.1□□□□□ -1.11
PVT1-205ENST00000517790 UPF1Q92900 1129 aaKnown RBP eCLIP8.09□□□□□ -1.11
PVT1-205ENST00000517790 ZNF219Q9P2Y4 722 aaPredicted RBP8.09□□□□□ -1.11
PVT1-205ENST00000517790 SYNMO15061 1565 aa8.09□□□□□ -1.11
PVT1-205ENST00000517790 HMGB1P09429 215 aaKnown RBP8.08□□□□□ -1.12
PVT1-205ENST00000517790 MKRN4PQ13434 485 aaPredicted RBP8.08□□□□□ -1.12
PVT1-205ENST00000517790 THEMISQ8N1K5 641 aaPredicted RBP8.08□□□□□ -1.12
PVT1-205ENST00000517790 UGGT1Q9NYU2 1555 aa8.08□□□□□ -1.12
PVT1-205ENST00000517790 ADGBQ8N7X0 1667 aa8.08□□□□□ -1.12
PVT1-205ENST00000517790 GTPBP6O43824 516 aaPredicted RBP8.07□□□□□ -1.12
PVT1-205ENST00000517790 SRCAPQ6ZRS2 3230 aa8.07□□□□□ -1.12
PVT1-205ENST00000517790 ZC3H13Q5T200 1668 aaKnown RBP8.07□□□□□ -1.12
PVT1-205ENST00000517790 GPATCH8Q9UKJ3 1502 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms