RNA–Protein interactions for RNA: ENST00000517684.2

RNF139-202, Transcript of ring finger protein 139, humanhuman

TSL 3

Gene RNF139, Length 467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-202ENST00000517684 P3H3Q8IVL6 736 aa10.8□□□□□ -0.68
RNF139-202ENST00000517684 EPAS1Q99814 870 aa10.8□□□□□ -0.68
RNF139-202ENST00000517684 GRXCR2A6NFK2 248 aa10.78□□□□□ -0.68
RNF139-202ENST00000517684 NBR1Q14596 966 aa10.77□□□□□ -0.69
RNF139-202ENST00000517684 ADGRD1Q6QNK2 874 aa10.77□□□□□ -0.69
RNF139-202ENST00000517684 RBM33Q96EV2 1170 aaKnown RBP10.76□□□□□ -0.69
RNF139-202ENST00000517684 TK2O00142 265 aa10.75□□□□□ -0.69
RNF139-202ENST00000517684 PRKCSHP14314 528 aaPredicted RBP10.74□□□□□ -0.69
RNF139-202ENST00000517684 C6orf132Q5T0Z8 1188 aa10.73□□□□□ -0.69
RNF139-202ENST00000517684 MYT1LQ9UL68 1186 aa10.73□□□□□ -0.69
RNF139-202ENST00000517684 PPP1R3GB7ZBB8 358 aa10.71□□□□□ -0.69
RNF139-202ENST00000517684 MAP3K7O43318 606 aa10.71□□□□□ -0.69
RNF139-202ENST00000517684 EN1Q05925 392 aaPredicted RBP10.71□□□□□ -0.69
RNF139-202ENST00000517684 VPS9D1Q9Y2B5 631 aa10.71□□□□□ -0.69
RNF139-202ENST00000517684 COL9A1P20849 921 aa10.7□□□□□ -0.7
RNF139-202ENST00000517684 ZBED2Q9BTP6 218 aa10.7□□□□□ -0.7
RNF139-202ENST00000517684 STAC3Q96MF2 364 aa10.69□□□□□ -0.7
RNF139-202ENST00000517684 SLC4A5Q9BY07 1137 aa10.69□□□□□ -0.7
RNF139-202ENST00000517684 HRO43593 1189 aa10.68□□□□□ -0.7
RNF139-202ENST00000517684 OSBPP22059 807 aa10.68□□□□□ -0.7
RNF139-202ENST00000517684 TSR1Q2NL82 804 aaKnown RBP10.68□□□□□ -0.7
RNF139-202ENST00000517684 TPRNQ4KMQ1 711 aa10.68□□□□□ -0.7
RNF139-202ENST00000517684 RNF166Q96A37 237 aaPredicted RBP10.68□□□□□ -0.7
RNF139-202ENST00000517684 MLLT3P42568 568 aaPredicted RBP10.67□□□□□ -0.7
RNF139-202ENST00000517684 PRIM1P49642 420 aaKnown RBP10.67□□□□□ -0.7
RNF139-202ENST00000517684 SEMA3EO15041 775 aa10.65□□□□□ -0.7
RNF139-202ENST00000517684 PROX2Q3B8N5 592 aa10.65□□□□□ -0.7
RNF139-202ENST00000517684 BHMG1C9JSJ3 638 aaPredicted RBP10.61□□□□□ -0.71
RNF139-202ENST00000517684 NBPF3Q9H094 633 aa10.6□□□□□ -0.71
RNF139-202ENST00000517684 RABGEF1Q9UJ41 708 aa10.6□□□□□ -0.71
RNF139-202ENST00000517684 MRPL50Q8N5N7 158 aaKnown RBP10.59□□□□□ -0.71
RNF139-202ENST00000517684 CERKQ8TCT0 537 aa10.59□□□□□ -0.71
RNF139-202ENST00000517684 CDHR5Q9HBB8 845 aa10.59□□□□□ -0.71
RNF139-202ENST00000517684 KIAA1468Q9P260 1216 aa10.59□□□□□ -0.71
RNF139-202ENST00000517684 TRIM6-TRIM34B2RNG4 842 aa10.58□□□□□ -0.72
RNF139-202ENST00000517684 GOLGA8CPA6NN73 597 aa10.57□□□□□ -0.72
RNF139-202ENST00000517684 ONECUT3O60422 494 aaPredicted RBP10.57□□□□□ -0.72
RNF139-202ENST00000517684 TESPA1A2RU30 521 aaPredicted RBP10.56□□□□□ -0.72
RNF139-202ENST00000517684 PRSS12P56730 875 aa10.56□□□□□ -0.72
RNF139-202ENST00000517684 CDCA7LQ96GN5 454 aa10.56□□□□□ -0.72
RNF139-202ENST00000517684 SMYD5Q6GMV2 418 aa10.55□□□□□ -0.72
RNF139-202ENST00000517684 PACS2Q86VP3 889 aa10.55□□□□□ -0.72
RNF139-202ENST00000517684 KCTD12Q96CX2 325 aaKnown RBP10.55□□□□□ -0.72
RNF139-202ENST00000517684 TSKSQ9UJT2 592 aa10.54□□□□□ -0.72
RNF139-202ENST00000517684 NUTM2FA1L443 756 aa10.53□□□□□ -0.72
RNF139-202ENST00000517684 NPDC1Q9NQX5 325 aaPredicted RBP10.53□□□□□ -0.72
RNF139-202ENST00000517684 SEPT9Q9UHD8 586 aaPredicted RBP10.52□□□□□ -0.73
RNF139-202ENST00000517684 LAPTM4BQ86VI4 370 aa10.51□□□□□ -0.73
RNF139-202ENST00000517684 WNT2BQ93097 391 aa10.51□□□□□ -0.73
RNF139-202ENST00000517684 FAM198AQ9UFP1 575 aa10.5□□□□□ -0.73
RNF139-202ENST00000517684 RBM26Q5T8P6 1007 aaKnown RBP10.49□□□□□ -0.73
RNF139-202ENST00000517684 HCSTQ9UBK5 93 aa10.49□□□□□ -0.73
RNF139-202ENST00000517684 PTGDRQ13258 359 aa10.48□□□□□ -0.73
RNF139-202ENST00000517684 RBM27Q9P2N5 1060 aaKnown RBP10.48□□□□□ -0.73
RNF139-202ENST00000517684 SMAPO00193 183 aa10.47□□□□□ -0.73
RNF139-202ENST00000517684 PTPN5P54829 565 aa10.47□□□□□ -0.73
RNF139-202ENST00000517684 FAM98CQ17RN3 349 aaKnown RBP10.47□□□□□ -0.73
RNF139-202ENST00000517684 PADI6Q6TGC4 694 aa10.47□□□□□ -0.73
RNF139-202ENST00000517684 ZFRQ96KR1 1074 aaKnown RBP10.47□□□□□ -0.73
RNF139-202ENST00000517684 ANKK1Q8NFD2 765 aa10.46□□□□□ -0.73
RNF139-202ENST00000517684 TATDN2Q93075 761 aa10.46□□□□□ -0.73
RNF139-202ENST00000517684 PNMA3Q9UL41 463 aa10.46□□□□□ -0.73
RNF139-202ENST00000517684 NBPF26B4DH59 902 aa10.45□□□□□ -0.74
RNF139-202ENST00000517684 THSD4Q6ZMP0 1018 aa10.45□□□□□ -0.74
RNF139-202ENST00000517684 C3orf80F5H4A9 247 aa10.44□□□□□ -0.74
RNF139-202ENST00000517684 FCHSD2O94868 740 aa10.44□□□□□ -0.74
RNF139-202ENST00000517684 NUDT18Q6ZVK8 323 aa10.44□□□□□ -0.74
RNF139-202ENST00000517684 TTC13Q8NBP0 860 aa10.44□□□□□ -0.74
RNF139-202ENST00000517684 TULP1O00294 542 aaPredicted RBP10.43□□□□□ -0.74
RNF139-202ENST00000517684 BCAMP50895 628 aa10.41□□□□□ -0.74
RNF139-202ENST00000517684 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.41□□□□□ -0.74
RNF139-202ENST00000517684 SOWAHBA6NEL2 793 aa10.39□□□□□ -0.75
RNF139-202ENST00000517684 LMOD2Q6P5Q4 547 aa10.39□□□□□ -0.75
RNF139-202ENST00000517684 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.39□□□□□ -0.75
RNF139-202ENST00000517684 HIC1Q14526 733 aa10.38□□□□□ -0.75
RNF139-202ENST00000517684 LRCH3Q96II8 777 aa10.38□□□□□ -0.75
RNF139-202ENST00000517684 HDGFP51858 240 aaKnown RBP10.37□□□□□ -0.75
RNF139-202ENST00000517684 SAMD7Q7Z3H4 446 aa10.37□□□□□ -0.75
RNF139-202ENST00000517684 GPIHBP1Q8IV16 184 aa10.37□□□□□ -0.75
RNF139-202ENST00000517684 FAM161AQ3B820 660 aa10.35□□□□□ -0.75
RNF139-202ENST00000517684 EYA1Q99502 592 aa10.35□□□□□ -0.75
RNF139-202ENST00000517684 GNPATO15228 680 aa10.34□□□□□ -0.75
RNF139-202ENST00000517684 RBM46Q8TBY0 533 aaKnown RBP10.34□□□□□ -0.75
RNF139-202ENST00000517684 HPS5Q9UPZ3 1129 aa10.34□□□□□ -0.75
RNF139-202ENST00000517684 ADGRG1Q9Y653 693 aa10.34□□□□□ -0.75
RNF139-202ENST00000517684 GPR37O15354 613 aa10.33□□□□□ -0.76
RNF139-202ENST00000517684 WBP1LQ9NX94 342 aa10.33□□□□□ -0.76
RNF139-202ENST00000517684 TSR3Q9UJK0 312 aaKnown RBP10.33□□□□□ -0.76
RNF139-202ENST00000517684 FECHP22830 423 aa10.32□□□□□ -0.76
RNF139-202ENST00000517684 RNF40O75150 1001 aa10.31□□□□□ -0.76
RNF139-202ENST00000517684 PPP4CP60510 307 aa10.31□□□□□ -0.76
RNF139-202ENST00000517684 SWT1Q5T5J6 900 aaKnown RBP10.31□□□□□ -0.76
RNF139-202ENST00000517684 PLA2G2EQ9NZK7 142 aa10.3□□□□□ -0.76
RNF139-202ENST00000517684 OATP04181 439 aa10.29□□□□□ -0.76
RNF139-202ENST00000517684 DNAJB2P25686 324 aa10.28□□□□□ -0.76
RNF139-202ENST00000517684 NYAP1Q6ZVC0 841 aa10.28□□□□□ -0.76
RNF139-202ENST00000517684 RCCD1A6NED2 376 aa10.27□□□□□ -0.77
RNF139-202ENST00000517684 SLC4A3P48751 1232 aa10.26□□□□□ -0.77
RNF139-202ENST00000517684 PXYLP1Q8TE99 480 aa10.26□□□□□ -0.77
RNF139-202ENST00000517684 METTL3Q86U44 580 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms