RNA–Protein interactions for RNA: ENST00000516516.1

RNU6-1038P-201, Transcript of RNA, U6 small nuclear 1038, pseudogene, humanhuman

BASIC

Gene RNU6-1038P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1038P-201ENST00000516516 EN1Q05925 392 aaPredicted RBP7.73□□□□□ -1.17
RNU6-1038P-201ENST00000516516 ADAM33Q9BZ11 813 aa7.73□□□□□ -1.17
RNU6-1038P-201ENST00000516516 GRXCR2A6NFK2 248 aa7.72□□□□□ -1.17
RNU6-1038P-201ENST00000516516 MAP3K7O43318 606 aa7.72□□□□□ -1.17
RNU6-1038P-201ENST00000516516 C6orf132Q5T0Z8 1188 aa7.72□□□□□ -1.17
RNU6-1038P-201ENST00000516516 SPNS2Q8IVW8 549 aa7.72□□□□□ -1.17
RNU6-1038P-201ENST00000516516 ADGRD1Q6QNK2 874 aa7.71□□□□□ -1.18
RNU6-1038P-201ENST00000516516 PLSCR2Q9NRY7 297 aa7.71□□□□□ -1.18
RNU6-1038P-201ENST00000516516 KDM2AQ9Y2K7 1162 aa7.71□□□□□ -1.18
RNU6-1038P-201ENST00000516516 AXIN2Q9Y2T1 843 aa7.71□□□□□ -1.18
RNU6-1038P-201ENST00000516516 PSEN2P49810 448 aa7.7□□□□□ -1.18
RNU6-1038P-201ENST00000516516 POTEEQ6S8J3 1075 aa7.7□□□□□ -1.18
RNU6-1038P-201ENST00000516516 NBPF3Q9H094 633 aa7.7□□□□□ -1.18
RNU6-1038P-201ENST00000516516 ZBED2Q9BTP6 218 aa7.68□□□□□ -1.18
RNU6-1038P-201ENST00000516516 MYT1LQ9UL68 1186 aa7.68□□□□□ -1.18
RNU6-1038P-201ENST00000516516 RBM33Q96EV2 1170 aaKnown RBP7.67□□□□□ -1.18
RNU6-1038P-201ENST00000516516 VPS9D1Q9Y2B5 631 aa7.67□□□□□ -1.18
RNU6-1038P-201ENST00000516516 OSBPP22059 807 aa7.66□□□□□ -1.18
RNU6-1038P-201ENST00000516516 MMRN1Q13201 1228 aa7.66□□□□□ -1.18
RNU6-1038P-201ENST00000516516 DMRTA1Q5VZB9 504 aa7.66□□□□□ -1.18
RNU6-1038P-201ENST00000516516 RBM27Q9P2N5 1060 aaKnown RBP7.66□□□□□ -1.18
RNU6-1038P-201ENST00000516516 RABGEF1Q9UJ41 708 aa7.66□□□□□ -1.18
RNU6-1038P-201ENST00000516516 TESPA1A2RU30 521 aaPredicted RBP7.64□□□□□ -1.19
RNU6-1038P-201ENST00000516516 GOLGA8CPA6NN73 597 aa7.64□□□□□ -1.19
RNU6-1038P-201ENST00000516516 HRO43593 1189 aa7.64□□□□□ -1.19
RNU6-1038P-201ENST00000516516 LAPTM4BQ86VI4 370 aa7.64□□□□□ -1.19
RNU6-1038P-201ENST00000516516 PACS2Q86VP3 889 aa7.64□□□□□ -1.19
RNU6-1038P-201ENST00000516516 MRPL50Q8N5N7 158 aaKnown RBP7.64□□□□□ -1.19
RNU6-1038P-201ENST00000516516 RNF166Q96A37 237 aaPredicted RBP7.64□□□□□ -1.19
RNU6-1038P-201ENST00000516516 SEMA3EO15041 775 aa7.63□□□□□ -1.19
RNU6-1038P-201ENST00000516516 TRIM6-TRIM34B2RNG4 842 aa7.62□□□□□ -1.19
RNU6-1038P-201ENST00000516516 MLLT3P42568 568 aaPredicted RBP7.61□□□□□ -1.19
RNU6-1038P-201ENST00000516516 PRSS12P56730 875 aa7.61□□□□□ -1.19
RNU6-1038P-201ENST00000516516 BHMG1C9JSJ3 638 aaPredicted RBP7.6□□□□□ -1.19
RNU6-1038P-201ENST00000516516 COL9A1P20849 921 aa7.6□□□□□ -1.19
RNU6-1038P-201ENST00000516516 TSR1Q2NL82 804 aaKnown RBP7.6□□□□□ -1.19
RNU6-1038P-201ENST00000516516 CDCA7LQ96GN5 454 aa7.6□□□□□ -1.19
RNU6-1038P-201ENST00000516516 NBPF26B4DH59 902 aa7.59□□□□□ -1.19
RNU6-1038P-201ENST00000516516 SLC24A1O60721 1099 aa7.59□□□□□ -1.19
RNU6-1038P-201ENST00000516516 FCHSD2O94868 740 aa7.59□□□□□ -1.19
RNU6-1038P-201ENST00000516516 NUTM2FA1L443 756 aa7.58□□□□□ -1.2
RNU6-1038P-201ENST00000516516 HDGFP51858 240 aaKnown RBP7.58□□□□□ -1.2
RNU6-1038P-201ENST00000516516 KIAA1468Q9P260 1216 aa7.58□□□□□ -1.2
RNU6-1038P-201ENST00000516516 HCSTQ9UBK5 93 aa7.58□□□□□ -1.2
RNU6-1038P-201ENST00000516516 FAM98CQ17RN3 349 aaKnown RBP7.57□□□□□ -1.2
RNU6-1038P-201ENST00000516516 PROX2Q3B8N5 592 aa7.57□□□□□ -1.2
RNU6-1038P-201ENST00000516516 ANKK1Q8NFD2 765 aa7.57□□□□□ -1.2
RNU6-1038P-201ENST00000516516 NECTIN2Q92692 538 aa7.57□□□□□ -1.2
RNU6-1038P-201ENST00000516516 SLC4A3P48751 1232 aa7.56□□□□□ -1.2
RNU6-1038P-201ENST00000516516 PTGDRQ13258 359 aa7.55□□□□□ -1.2
RNU6-1038P-201ENST00000516516 HIC1Q14526 733 aa7.55□□□□□ -1.2
RNU6-1038P-201ENST00000516516 NYAP1Q6ZVC0 841 aa7.54□□□□□ -1.2
RNU6-1038P-201ENST00000516516 WNT2BQ93097 391 aa7.54□□□□□ -1.2
RNU6-1038P-201ENST00000516516 PRIM1P49642 420 aaKnown RBP7.53□□□□□ -1.2
RNU6-1038P-201ENST00000516516 TTC13Q8NBP0 860 aa7.53□□□□□ -1.2
RNU6-1038P-201ENST00000516516 KCTD12Q96CX2 325 aaKnown RBP7.53□□□□□ -1.2
RNU6-1038P-201ENST00000516516 CDHR5Q9HBB8 845 aa7.53□□□□□ -1.2
RNU6-1038P-201ENST00000516516 NPDC1Q9NQX5 325 aaPredicted RBP7.53□□□□□ -1.2
RNU6-1038P-201ENST00000516516 TSKSQ9UJT2 592 aa7.53□□□□□ -1.2
RNU6-1038P-201ENST00000516516 GPIHBP1Q8IV16 184 aa7.52□□□□□ -1.21
RNU6-1038P-201ENST00000516516 RBM46Q8TBY0 533 aaKnown RBP7.52□□□□□ -1.21
RNU6-1038P-201ENST00000516516 TATDN2Q93075 761 aa7.52□□□□□ -1.21
RNU6-1038P-201ENST00000516516 ZFRQ96KR1 1074 aaKnown RBP7.52□□□□□ -1.21
RNU6-1038P-201ENST00000516516 PNMA3Q9UL41 463 aa7.52□□□□□ -1.21
RNU6-1038P-201ENST00000516516 OATP04181 439 aa7.51□□□□□ -1.21
RNU6-1038P-201ENST00000516516 GNPATO15228 680 aa7.5□□□□□ -1.21
RNU6-1038P-201ENST00000516516 RBM26Q5T8P6 1007 aaKnown RBP7.5□□□□□ -1.21
RNU6-1038P-201ENST00000516516 PADI6Q6TGC4 694 aa7.5□□□□□ -1.21
RNU6-1038P-201ENST00000516516 THSD4Q6ZMP0 1018 aa7.5□□□□□ -1.21
RNU6-1038P-201ENST00000516516 LRCH3Q96II8 777 aa7.5□□□□□ -1.21
RNU6-1038P-201ENST00000516516 SOWAHBA6NEL2 793 aa7.49□□□□□ -1.21
RNU6-1038P-201ENST00000516516 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.49□□□□□ -1.21
RNU6-1038P-201ENST00000516516 SEPT9Q9UHD8 586 aaPredicted RBP7.49□□□□□ -1.21
RNU6-1038P-201ENST00000516516 NUDT18Q6ZVK8 323 aa7.48□□□□□ -1.21
RNU6-1038P-201ENST00000516516 SLF2Q8IX21 1173 aa7.47□□□□□ -1.21
RNU6-1038P-201ENST00000516516 DNAJB2P25686 324 aa7.46□□□□□ -1.22
RNU6-1038P-201ENST00000516516 BCANQ96GW7 911 aa7.46□□□□□ -1.22
RNU6-1038P-201ENST00000516516 TSR3Q9UJK0 312 aaKnown RBP7.46□□□□□ -1.22
RNU6-1038P-201ENST00000516516 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.45□□□□□ -1.22
RNU6-1038P-201ENST00000516516 RSPH4AQ5TD94 716 aa7.45□□□□□ -1.22
RNU6-1038P-201ENST00000516516 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.45□□□□□ -1.22
RNU6-1038P-201ENST00000516516 PRR14Q9BWN1 585 aa7.45□□□□□ -1.22
RNU6-1038P-201ENST00000516516 FAM198AQ9UFP1 575 aa7.45□□□□□ -1.22
RNU6-1038P-201ENST00000516516 PTPN5P54829 565 aa7.44□□□□□ -1.22
RNU6-1038P-201ENST00000516516 PPP4CP60510 307 aa7.44□□□□□ -1.22
RNU6-1038P-201ENST00000516516 EYA1Q99502 592 aa7.44□□□□□ -1.22
RNU6-1038P-201ENST00000516516 ADGRG1Q9Y653 693 aa7.44□□□□□ -1.22
RNU6-1038P-201ENST00000516516 LMOD2Q6P5Q4 547 aa7.43□□□□□ -1.22
RNU6-1038P-201ENST00000516516 SMAPO00193 183 aa7.42□□□□□ -1.22
RNU6-1038P-201ENST00000516516 MAP2K5Q13163 448 aa7.41□□□□□ -1.22
RNU6-1038P-201ENST00000516516 SAMD7Q7Z3H4 446 aa7.41□□□□□ -1.22
RNU6-1038P-201ENST00000516516 HPS5Q9UPZ3 1129 aa7.41□□□□□ -1.22
RNU6-1038P-201ENST00000516516 MINK1Q8N4C8 1332 aaPredicted RBP7.41□□□□□ -1.22
RNU6-1038P-201ENST00000516516 GPR37O15354 613 aa7.4□□□□□ -1.22
RNU6-1038P-201ENST00000516516 BCAMP50895 628 aa7.4□□□□□ -1.22
RNU6-1038P-201ENST00000516516 PXYLP1Q8TE99 480 aa7.4□□□□□ -1.22
RNU6-1038P-201ENST00000516516 TMEM134Q9H6X4 195 aa7.4□□□□□ -1.22
RNU6-1038P-201ENST00000516516 RCCD1A6NED2 376 aa7.39□□□□□ -1.23
RNU6-1038P-201ENST00000516516 SWT1Q5T5J6 900 aaKnown RBP7.38□□□□□ -1.23
RNU6-1038P-201ENST00000516516 IFFO2Q5TF58 517 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms